Conservation of cofitness between Psyr_3856 and Psyr_4622 in Pseudomonas syringae pv. syringae B728a

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_3856 Helicase c2 1.0 Psyr_4622 Nucleotidyl transferase 0.50 17
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_3856 Helicase c2 1.00 Psyr_4622 Nucleotidyl transferase low > 86
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_2942 ATP-dependent helicase DinG/Rad3 0.69 Pf6N2E2_4810 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) low > 103
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_05425 ATP-dependent DNA helicase DinG 0.68 AO356_14360 mannose-1-phosphate guanylyltransferase low > 104
Pseudomonas simiae WCS417 0.93 PS417_06510 ATP-dependent DNA helicase DinG 0.65 PS417_25785 mannose-1-phosphate guanylyltransferase — —
Pseudomonas fluorescens SBW25 0.93 PFLU_RS06540 ATP-dependent DNA helicase DinG 0.66 PFLU_RS27440 nucleotidyltransferase family protein low > 109
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_4624 ATP-dependent helicase DinG/Rad3 0.67 PfGW456L13_1205 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) low > 87
Pseudomonas fluorescens FW300-N2E3 0.93 AO353_17020 ATP-dependent DNA helicase DinG 0.71 AO353_07290 mannose-1-phosphate guanylyltransferase low > 101
Pseudomonas fluorescens SBW25-INTG 0.93 PFLU_RS06540 ATP-dependent DNA helicase DinG 0.66 PFLU_RS27440 nucleotidyltransferase family protein 0.18 90
Pseudomonas sp. RS175 0.93 PFR28_00520 ATP-dependent DNA helicase DinG 0.69 PFR28_04059 N-acetylmuramate alpha-1-phosphate uridylyltransferase low > 88
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_3194 ATP-dependent helicase DinG/Rad3 0.68 Pf1N1B4_2533 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) — —
Pseudomonas sp. S08-1 0.89 OH686_04830 ATP-dependent helicase DinG/Rad3 0.69 OH686_15065 Nucleotidyl transferase putative low > 80
Pseudomonas putida KT2440 0.88 PP_1125 putative Helicase 0.66 PP_0406 Nucleotidyltransferase family protein low > 96
Pseudomonas stutzeri RCH2 0.88 Psest_2857 Rad3-related DNA helicases 0.69 Psest_3663 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) — —
Marinobacter adhaerens HP15 0.45 HP15_1856 helicase c2 0.48 HP15_3283 nucleotidyltransferase family protein — —
Shewanella sp. ANA-3 0.34 Shewana3_2630 dinG ATP-dependent DNA helicase DinG (RefSeq) 0.42 Shewana3_3204 nucleotidyl transferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.34 SO1819 dinG ATP-dependent helicase DinG (NCBI ptt file) 0.41 SO3634 nucleotidyltransferase family protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.33 Shew_2483 dinG ATP-dependent DNA helicase DinG (RefSeq) 0.46 Shew_0884 nucleotidyl transferase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.32 Sama_1249 dinG ATP-dependent DNA helicase DinG (RefSeq) 0.42 Sama_2814 nucleotidyl transferase (RefSeq) low > 62
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS16845 ATP-dependent DNA helicase DinG 0.40 ABZR86_RS09505 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU low > 74
Rhodanobacter denitrificans MT42 0.29 LRK55_RS10710 ATP-dependent DNA helicase DinG 0.43 LRK55_RS02860 nucleotidyltransferase family protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS11005 ATP-dependent DNA helicase DinG 0.43 LRK54_RS03110 nucleotidyltransferase family protein low > 59
Acidovorax sp. GW101-3H11 0.27 Ac3H11_4422 ATP-dependent helicase DinG/Rad3 0.36 Ac3H11_651 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.26 GFF2695 ATP-dependent helicase DinG/Rad3 0.33 GFF2486 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) — —
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.5017.1 ATP-dependent helicase DinG/Rad3 0.43 Xcc-8004.1680.1 FIG006611: nucleotidyltransferase low > 74
Kangiella aquimarina DSM 16071 0.15 B158DRAFT_2492 Rad3-related DNA helicases 0.43 B158DRAFT_0793 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) low > 40
Cupriavidus basilensis FW507-4G11 0.15 RR42_RS07580 helicase 0.39 RR42_RS02750 mannose-1-phosphate guanylyltransferase low > 128
Paraburkholderia bryophila 376MFSha3.1 0.14 H281DRAFT_00533 ATP-dependent DNA helicase DinG 0.39 H281DRAFT_04635 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) low > 103
Paraburkholderia sabiae LMG 24235 0.14 QEN71_RS06060 ATP-dependent DNA helicase 0.38 QEN71_RS02105 nucleotidyltransferase family protein low > 153
Variovorax sp. OAS795 0.13 ABID97_RS14180 ATP-dependent DNA helicase 0.32 ABID97_RS02455 nucleotidyltransferase family protein low > 91
Ralstonia solanacearum GMI1000 0.09 RS_RS08195 ATP-dependent DNA helicase 0.38 RS_RS02545 nucleotidyltransferase family protein low > 80
Paraburkholderia graminis OAS925 0.09 ABIE53_002724 ATP-dependent DNA helicase DinG 0.37 ABIE53_000795 MurNAc alpha-1-phosphate uridylyltransferase low > 113
Ralstonia solanacearum PSI07 0.09 RPSI07_RS15960 ATP-dependent DNA helicase 0.39 RPSI07_RS21495 nucleotidyltransferase family protein — —
Herbaspirillum seropedicae SmR1 0.09 HSERO_RS14855 helicase 0.37 HSERO_RS03515 mannose-1-phosphate guanylyltransferase — —
Caulobacter crescentus NA1000 0.05 CCNA_02118 ATP-dependent helicase, dinG family 0.18 CCNA_03650 mannose-1-phosphate guanyltransferase low > 66
Caulobacter crescentus NA1000 Δfur 0.05 CCNA_02118 ATP-dependent helicase, dinG family 0.18 CCNA_03650 mannose-1-phosphate guanyltransferase low > 67

Not shown: 28 genomes with orthologs for Psyr_3856 only; 26 genomes with orthologs for Psyr_4622 only