Conservation of cofitness between Psyr_0497 and Psyr_2469 in Pseudomonas syringae pv. syringae B728a

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0497 LamB/YcsF 1.0 Psyr_2469 Propionyl-CoA carboxylase 0.53 19
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0497 LamB/YcsF 1.00 Psyr_2469 Propionyl-CoA carboxylase low > 86
Agrobacterium fabrum C58 0.67 Atu3910 LamB/YcsF family protein 0.74 Atu3478 3-methylcrotonoyl-CoA carboxylase beta subunit low > 89
Variovorax sp. SCN45 0.66 GFF5546 Lactam utilization protein LamB 0.70 GFF2008 Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) low > 127
Castellaniella sp019104865 MT123 0.65 ABCV34_RS01510 5-oxoprolinase subunit PxpA 0.67 ABCV34_RS12355 carboxyl transferase domain-containing protein 0.96 4
Phaeobacter inhibens DSM 17395 0.49 PGA1_c28700 LamB/YcsF family protein 0.65 PGA1_c10320 methylcrotonoyl-CoA carboxylase beta chain — —
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_04730 5-oxoprolinase subunit A 0.70 OKGIIK_04015 Methylcrotonoyl-CoA carboxylase low > 52
Rhodopseudomonas palustris CGA009 0.46 TX73_013895 LamB/YcsF family protein 0.68 TX73_013115 carboxyl transferase domain-containing protein low > 86
Variovorax sp. OAS795 0.45 ABID97_RS01255 5-oxoprolinase subunit PxpA 0.69 ABID97_RS25130 carboxyl transferase domain-containing protein low > 91
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS18635 LamB/YcsF family protein 0.71 BPHYT_RS23265 methylcrotonoyl-CoA carboxylase low > 109
Paraburkholderia graminis OAS925 0.44 ABIE53_000049 UPF0271 protein 0.71 ABIE53_005466 3-methylcrotonyl-CoA carboxylase beta subunit low > 113
Rhodospirillum rubrum S1H 0.44 Rru_A1504 LamB/YcsF (NCBI) 0.70 Rru_A1943 Propionyl-CoA carboxylase (NCBI) low > 58
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS28660 5-oxoprolinase subunit PxpA 0.71 QEN71_RS12865 carboxyl transferase domain-containing protein low > 153
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_05811 UPF0271 protein 0.70 H281DRAFT_01345 3-methylcrotonyl-CoA carboxylase beta subunit low > 103
Azospirillum brasilense Sp245 0.44 AZOBR_RS14715 hypothetical protein 0.75 AZOBR_RS22295 methylcrotonoyl-CoA carboxylase low > 97
Pontibacter actiniarum KMM 6156, DSM 19842 0.43 CA264_08790 LamB/YcsF family protein 0.47 CA264_20625 methylcrotonoyl-CoA carboxylase low > 74
Azospirillum sp. SherDot2 0.43 MPMX19_04959 5-oxoprolinase subunit A 0.74 MPMX19_03938 Methylmalonyl-CoA carboxyltransferase 12S subunit low > 112
Magnetospirillum magneticum AMB-1 0.43 AMB_RS15095 LamB/YcsF family protein 0.72 AMB_RS03475 methylcrotonoyl-CoA carboxylase low > 64
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_4478 Lactam utilization protein LamB 0.90 PfGW456L13_2590 Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) low > 87
Pseudomonas stutzeri RCH2 0.43 Psest_1542 Uncharacterized proteins, homologs of lactam utilization protein B 0.85 Psest_1083 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) low > 67
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_17995 hypothetical protein 0.89 AO353_20345 methylcrotonoyl-CoA carboxylase low > 101
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_3366 Lactam utilization protein LamB 0.90 Pf1N1B4_3986 Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) low > 87
Pseudomonas sp. RS175 0.42 PFR28_00728 5-oxoprolinase subunit A 3 0.90 PFR28_01259 Methylmalonyl-CoA carboxyltransferase 12S subunit low > 88
Pedobacter sp. GW460-11-11-14-LB5 0.42 CA265_RS10100 lactam utilization protein LamB 0.48 CA265_RS10640 methylcrotonoyl-CoA carboxylase low > 88
Dinoroseobacter shibae DFL-12 0.42 Dshi_2026 LamB/YcsF family protein (RefSeq) 0.61 Dshi_1300 Propionyl-CoA carboxylase (RefSeq) low > 64
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS03425 LamB/YcsF family protein 0.72 RALBFv3_RS10480 methylcrotonoyl-CoA carboxylase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.42 ABZR88_RS12605 5-oxoprolinase subunit PxpA 0.47 ABZR88_RS10315 acyl-CoA carboxylase subunit beta low > 71
Ralstonia solanacearum UW163 0.42 UW163_RS10245 LamB/YcsF family protein 0.72 UW163_RS03100 methylcrotonoyl-CoA carboxylase — —
Fusobacterium nucleatum SB010 0.42 HUW76_07935 LamB/YcsF family protein 0.13 HUW76_02535 glutaconyl-CoA decarboxylase subunit alpha — —
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_2708 Lactam utilization protein LamB 0.91 Pf6N2E2_2192 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) low > 103
Ralstonia solanacearum PSI07 0.41 RPSI07_RS02850 hypothetical protein 0.71 RPSI07_RS22835 methylcrotonoyl-CoA carboxylase low > 81
Ralstonia solanacearum GMI1000 0.41 RS_RS21600 hypothetical protein 0.72 RS_RS01320 methylcrotonoyl-CoA carboxylase low > 80
Pseudomonas sp. S08-1 0.41 OH686_08750 Lactam utilization protein LamB 0.88 OH686_00850 Methylcrotonyl-CoA carboxylase carboxyl transferase subunit low > 80
Marinobacter adhaerens HP15 0.41 HP15_2685 UPF0271 protein, LamB/YcsF family 0.78 HP15_1004 3-methylcrotonyl CoA carboxylase, beta subunit low > 73
Alteromonas macleodii MIT1002 0.40 MIT1002_02298 LamB/YcsF family protein 0.73 MIT1002_01668 Methylmalonyl-CoA carboxyltransferase 12S subunit low > 70
Ralstonia sp. UNC404CL21Col 0.40 ABZR87_RS15325 5-oxoprolinase subunit PxpA 0.72 ABZR87_RS06280 carboxyl transferase domain-containing protein low > 80
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS00650 hypothetical protein 0.71 RR42_RS26905 methylcrotonoyl-CoA carboxylase low > 128
Shewanella loihica PV-4 0.38 Shew_0006 LamB/YcsF family protein (RefSeq) 0.72 Shew_2571 propionyl-CoA carboxylase (RefSeq) low > 60
Bosea sp. OAE506 0.38 ABIE41_RS24170 5-oxoprolinase subunit PxpA 0.66 ABIE41_RS14815 carboxyl transferase domain-containing protein low > 77
Shewanella amazonensis SB2B 0.37 Sama_0021 hypothetical protein (RefSeq) 0.73 Sama_1361 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) low > 62
Lysobacter sp. OAE881 0.32 ABIE51_RS08130 5-oxoprolinase subunit PxpA 0.66 ABIE51_RS13160 carboxyl transferase domain-containing protein low > 62
Kangiella aquimarina DSM 16071 0.30 B158DRAFT_1994 Uncharacterized proteins, homologs of lactam utilization protein B 0.76 B158DRAFT_2509 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) — —

Not shown: 23 genomes with orthologs for Psyr_0497 only; 31 genomes with orthologs for Psyr_2469 only