| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_3415 | | Transcriptional regulator, LacI family | 1.0 | PP_5337 | | LysR family transcriptional regulator | 0.31 | 6 |
| Pseudomonas syringae pv. syringae B728a | 0.68 | Psyr_3336 | | transcriptional regulator, LacI family | 0.90 | Psyr_5050 | | transcriptional regulator, LysR family | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.68 | Psyr_3336 | | transcriptional regulator, LacI family | 0.90 | Psyr_5050 | | transcriptional regulator, LysR family | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.67 | Pf1N1B4_558 | | Gluconate utilization system Gnt-I transcriptional repressor | 0.90 | Pf1N1B4_2026 | | Transcriptional regulator | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.67 | PfGW456L13_1925 | | Gluconate utilization system Gnt-I transcriptional repressor | 0.90 | PfGW456L13_743 | | Transcriptional regulator | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.67 | Pf6N2E2_2865 | | Gluconate utilization system Gnt-I transcriptional repressor | 0.89 | Pf6N2E2_4084 | | Transcriptional regulator | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.67 | AO356_05065 | | LacI family transcriptional regulator | 0.90 | AO356_11085 | | LysR family transcriptional regulator | low | > 104 |
| Pseudomonas fluorescens FW300-N2E3 | 0.66 | AO353_03255 | | LacI family transcriptional regulator | 0.90 | AO353_09945 | | LysR family transcriptional regulator | low | > 101 |
| Pseudomonas sp. RS175 | 0.66 | PFR28_00593 | | HTH-type transcriptional regulator GntR | 0.90 | PFR28_04497 | | HTH-type transcriptional regulator YjiE | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.66 | PFLU_RS23595 | | LacI family DNA-binding transcriptional regulator | 0.91 | PFLU_RS29810 | | LysR family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.66 | PFLU_RS23595 | | LacI family DNA-binding transcriptional regulator | 0.91 | PFLU_RS29810 | | LysR family transcriptional regulator | low | > 109 |
| Pseudomonas simiae WCS417 | 0.66 | PS417_21990 | | LacI family transcriptional regulator | 0.91 | PS417_28125 | | LysR family transcriptional regulator | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.56 | GFF5509 | | Gluconate utilization system Gnt-I transcriptional repressor | 0.35 | GFF518 | | Transcriptional regulator | low | > 90 |
| Acidovorax sp. GW101-3H11 | 0.55 | Ac3H11_3230 | | Gluconate utilization system Gnt-I transcriptional repressor | 0.34 | Ac3H11_1953 | | Transcriptional regulator | low | > 79 |
| Pseudomonas stutzeri RCH2 | 0.48 | Psest_2126 | | Transcriptional regulators | 0.80 | Psest_4073 | | Transcriptional regulator | — | — |
| Burkholderia phytofirmans PsJN | 0.46 | BPHYT_RS00410 | | LacI family transcription regulator | 0.32 | BPHYT_RS16710 | | LysR family transcriptional regulator | low | > 109 |
| Herbaspirillum seropedicae SmR1 | 0.46 | HSERO_RS05460 | | LacI family transcription regulator | 0.35 | HSERO_RS19265 | | LysR family transcriptional regulator | low | > 78 |
| Azospirillum sp. SherDot2 | 0.45 | MPMX19_05332 | | HTH-type transcriptional regulator GntR | 0.22 | MPMX19_05675 | | HTH-type transcriptional regulator YjiE | low | > 112 |
| Azospirillum brasilense Sp245 | 0.39 | AZOBR_RS15720 | | LacI family transcription regulator | 0.23 | AZOBR_RS17550 | | LysR family transcriptional regulator | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.32 | QEN71_RS10090 | | LacI family DNA-binding transcriptional regulator | 0.33 | QEN71_RS33805 | | LysR substrate-binding domain-containing protein | low | > 153 |
| Dickeya dianthicola 67-19 | 0.32 | HGI48_RS19900 | | gluconate operon transcriptional repressor GntR | 0.31 | HGI48_RS07255 | | hypochlorite stress DNA-binding transcriptional regulator HypT | low | > 71 |
| Dickeya dadantii 3937 | 0.32 | DDA3937_RS19785 | | gluconate operon transcriptional repressor GntR | 0.30 | DDA3937_RS07390 | | hypochlorite stress DNA-binding transcriptional regulator HypT | low | > 74 |
| Dickeya dianthicola ME23 | 0.32 | DZA65_RS20970 | | gluconate operon transcriptional repressor GntR | 0.31 | DZA65_RS07765 | | hypochlorite stress DNA-binding transcriptional regulator HypT | low | > 75 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.31 | H281DRAFT_03425 | | transcriptional regulator, LacI family | 0.32 | H281DRAFT_04272 | | transcriptional regulator, LysR family | — | — |
| Paraburkholderia graminis OAS925 | 0.31 | ABIE53_005334 | | LacI family gluconate utilization system Gnt-I transcriptional repressor | 0.32 | ABIE53_003512 | | DNA-binding transcriptional LysR family regulator | low | > 113 |
| Variovorax sp. SCN45 | 0.31 | GFF7257 | | KEGG: LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor | 0.33 | GFF4595 | | Transcriptional regulator | low | > 127 |
| Klebsiella michiganensis M5al | 0.30 | BWI76_RS06150 | | transcriptional regulator | 0.28 | BWI76_RS17610 | | LysR family transcriptional regulator | low | > 92 |
| Rahnella sp. WP5 | 0.30 | EX31_RS05060 | | gluconate operon transcriptional repressor GntR | 0.28 | EX31_RS05520 | | LysR family transcriptional regulator | low | > 89 |
| Cupriavidus basilensis FW507-4G11 | 0.30 | RR42_RS03860 | | transcriptional regulator | 0.35 | RR42_RS29580 | | LysR family transcriptional regulator | low | > 128 |
| Pectobacterium carotovorum WPP14 | 0.29 | HER17_RS16515 | | LacI family DNA-binding transcriptional regulator | 0.29 | HER17_RS14225 | | hypochlorite stress DNA-binding transcriptional regulator HypT | low | > 75 |
| Sinorhizobium meliloti 1021 | 0.29 | SM_b20667 | | LacI family transcriptional regulator | 0.25 | SMa0097 | | LysR family transcriptional regulator | low | > 103 |
| Escherichia coli ECOR38 | 0.29 | HEPCGN_15660 | gntR | gluconate operon transcriptional repressor GntR | 0.31 | HEPCGN_09540 | hypT | hypochlorite stress DNA-binding transcriptional regulator HypT | low | > 85 |
| Escherichia coli ECRC62 | 0.29 | BNILDI_02870 | gntR | gluconate operon transcriptional repressor GntR | 0.31 | BNILDI_07735 | hypT | hypochlorite stress DNA-binding transcriptional regulator HypT | — | — |
| Escherichia coli Nissle 1917 | 0.29 | ECOLIN_RS19675 | | gluconate operon transcriptional repressor GntR | 0.31 | ECOLIN_RS24870 | | hypochlorite stress DNA-binding transcriptional regulator HypT | low | > 52 |
| Escherichia coli BW25113 | 0.29 | b3438 | gntR | DNA-binding transcriptional repressor (NCBI) | 0.31 | b4327 | yjiE | predicted DNA-binding transcriptional regulator (NCBI) | low | > 76 |
| Variovorax sp. OAS795 | 0.29 | ABID97_RS01205 | | LacI family DNA-binding transcriptional regulator | 0.34 | ABID97_RS05925 | | LysR substrate-binding domain-containing protein | low | > 91 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.29 | OHPLBJKB_00264 | | HTH-type transcriptional regulator GntR | 0.31 | OHPLBJKB_03739 | | HTH-type transcriptional regulator YjiE | low | > 73 |
| Escherichia fergusonii Becca | 0.29 | EFB2_00382 | | HTH-type transcriptional regulator GntR | 0.31 | EFB2_04117 | | HTH-type transcriptional regulator YjiE | low | > 86 |
| Phaeobacter inhibens DSM 17395 | 0.29 | PGA1_c33870 | | putative HTH-type transcriptional regulator GntR | 0.29 | PGA1_262p00990 | | transcriptional regulator, LysR family | low | > 62 |
| Escherichia coli ECOR27 | 0.28 | NOLOHH_08635 | gntR | gluconate operon transcriptional repressor GntR | 0.31 | NOLOHH_03860 | hypT | hypochlorite stress DNA-binding transcriptional regulator HypT | — | — |
| Dinoroseobacter shibae DFL-12 | 0.28 | Dshi_3322 | | transcriptional regulator, LacI family (RefSeq) | 0.24 | Dshi_1440 | | transcriptional regulator, LysR family (RefSeq) | low | > 64 |
| Escherichia coli BL21 | 0.28 | ECD_03289 | | d-gluconate inducible gluconate regulon transcriptional repressor | 0.31 | ECD_04196 | | hypochlorite-responsive transcription factor | low | > 60 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.28 | GFF406 | | Transcriptional regulator, LacI family | 0.30 | GFF984 | | LysR family transcriptional regulator QseA | low | > 78 |
| Ralstonia sp. UNC404CL21Col | 0.28 | ABZR87_RS18255 | | LacI family DNA-binding transcriptional regulator | 0.33 | ABZR87_RS07510 | | LysR family transcriptional regulator | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.28 | RPSI07_RS07575 | | LacI family DNA-binding transcriptional regulator | 0.33 | RPSI07_RS21665 | | LysR family transcriptional regulator | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.27 | RS_RS24865 | | LacI family DNA-binding transcriptional regulator | 0.32 | RS_RS02375 | | LysR family transcriptional regulator | low | > 80 |
| Agrobacterium fabrum C58 | 0.27 | Atu4685 | | LacI family transcriptional regulator | 0.30 | Atu2512 | | transcriptional regulator, LysR family | low | > 89 |
| Ralstonia solanacearum UW163 | 0.26 | UW163_RS16860 | | GntR family transcriptional regulator | 0.33 | UW163_RS02040 | | LysR family transcriptional regulator | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.26 | RALBFv3_RS16125 | | GntR family transcriptional regulator | 0.33 | RALBFv3_RS11545 | | LysR family transcriptional regulator | low | > 76 |
Not shown: 14 genomes with orthologs for PP_3415 only; 4 genomes with orthologs for PP_5337 only