Conservation of cofitness between PP_1898 and PP_4880 in Pseudomonas putida KT2440

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1898 MotA/TolQ/ExbB proton channel family protein 1.0 PP_4880 exoribonuclease R 0.38 13
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_20065 biopolymer transporter ExbB 0.82 AO356_08610 exoribonuclease R — —
Pseudomonas fluorescens FW300-N2E2 0.80 Pf6N2E2_5931 MotA/TolQ/ExbB proton channel family protein 0.82 Pf6N2E2_3607 3'-to-5' exoribonuclease RNase R — —
Pseudomonas fluorescens GW456-L13 0.80 PfGW456L13_2084 MotA/TolQ/ExbB proton channel family protein 0.83 PfGW456L13_144 3'-to-5' exoribonuclease RNase R low > 87
Pseudomonas fluorescens FW300-N1B4 0.80 Pf1N1B4_472 MotA/TolQ/ExbB proton channel family protein 0.82 Pf1N1B4_1403 3'-to-5' exoribonuclease RNase R — —
Pseudomonas fluorescens SBW25-INTG 0.79 PFLU_RS18395 MotA/TolQ/ExbB proton channel family protein 0.81 PFLU_RS02625 ribonuclease R low > 109
Pseudomonas fluorescens FW300-N2E3 0.79 AO353_01460 biopolymer transporter ExbB 0.83 AO353_13200 exoribonuclease R — —
Pseudomonas fluorescens SBW25 0.79 PFLU_RS18395 MotA/TolQ/ExbB proton channel family protein 0.81 PFLU_RS02625 ribonuclease R low > 109
Pseudomonas sp. RS175 0.78 PFR28_03030 Tol-Pal system protein TolQ 0.83 PFR28_05130 Ribonuclease R — —
Pseudomonas simiae WCS417 0.78 PS417_16345 biopolymer transporter ExbB 0.81 PS417_02555 exoribonuclease R — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.77 Psyr_1633 MotA/TolQ/ExbB proton channel 0.81 Psyr_0579 RNAse R low > 86
Pseudomonas syringae pv. syringae B728a 0.77 Psyr_1633 MotA/TolQ/ExbB proton channel 0.81 Psyr_0579 RNAse R low > 86
Pseudomonas sp. S08-1 0.76 OH686_22050 MotA/TolQ/ExbB proton channel family protein 0.78 OH686_15910 ribonuclease R low > 80
Pseudomonas stutzeri RCH2 0.72 Psest_1672 Biopolymer transport proteins 0.75 Psest_0691 ribonuclease R — —
Marinobacter adhaerens HP15 0.59 HP15_2066 MotA/TolQ/ExbB proton channel family protein 0.47 HP15_622 exoribonuclease R — —
Kangiella aquimarina DSM 16071 0.50 B158DRAFT_1596 Biopolymer transport proteins 0.45 B158DRAFT_1989 ribonuclease R low > 40
Dechlorosoma suillum PS 0.41 Dsui_3267 biopolymer transport protein 0.44 Dsui_3128 ribonuclease R — —
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS05855 flagellar motor protein MotA 0.41 HSERO_RS09290 ribonuclease R low > 78
Rhodanobacter denitrificans MT42 0.38 LRK55_RS15960 MotA/TolQ/ExbB proton channel family protein 0.39 LRK55_RS00235 ribonuclease R — —
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS16210 MotA/TolQ/ExbB proton channel family protein 0.39 LRK54_RS00495 ribonuclease R — —
Lysobacter sp. OAE881 0.37 ABIE51_RS12485 MotA/TolQ/ExbB proton channel family protein 0.38 ABIE51_RS07475 ribonuclease R low > 62
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_08445 tolQ biopolymer transporter ExbB 0.39 OKGIIK_06755 rnr ribonuclease R low > 52
Xanthomonas campestris pv. campestris strain 8004 0.37 Xcc-8004.2470.1 Ferric siderophore transport system, biopolymer transport protein ExbB 0.38 Xcc-8004.3370.1 3'-to-5' exoribonuclease RNase R low > 74
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS03470 flagellar motor protein MotA 0.43 RR42_RS13065 ribonuclease R low > 128
Ralstonia sp. UNC404CL21Col 0.32 ABZR87_RS00715 MotA/TolQ/ExbB proton channel family protein 0.41 ABZR87_RS10985 ribonuclease R low > 80
Ralstonia solanacearum PSI07 0.32 RPSI07_RS12230 MotA/TolQ/ExbB proton channel family protein 0.42 RPSI07_RS18030 ribonuclease R low > 81
Ralstonia solanacearum UW163 0.32 UW163_RS08560 MotA/TolQ/ExbB proton channel family protein 0.41 UW163_RS12810 ribonuclease R — —
Ralstonia solanacearum GMI1000 0.32 RS_RS12675 MotA/TolQ/ExbB proton channel family protein 0.42 RS_RS06155 ribonuclease R low > 80
Ralstonia solanacearum IBSBF1503 0.32 RALBFv3_RS05065 MotA/TolQ/ExbB proton channel family protein 0.41 RALBFv3_RS15345 ribonuclease R low > 76
Acinetobacter radioresistens SK82 0.32 MPMX26_01217 Biopolymer transport protein ExbB 0.35 MPMX26_02684 Ribonuclease R low > 36
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS06300 MotA/TolQ/ExbB proton channel family protein 0.39 ABZR86_RS08270 ribonuclease R — —
Variovorax sp. SCN45 0.31 GFF350 Ferric siderophore transport system, biopolymer transport protein ExbB 0.37 GFF399 3'-to-5' exoribonuclease RNase R low > 127
Variovorax sp. OAS795 0.31 ABID97_RS16950 MotA/TolQ/ExbB proton channel family protein 0.38 ABID97_RS17200 ribonuclease R low > 91
Acidovorax sp. GW101-3H11 0.29 Ac3H11_2383 Ferric siderophore transport system, biopolymer transport protein ExbB 0.38 Ac3H11_412 3'-to-5' exoribonuclease RNase R low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.28 GFF4510 Ferric siderophore transport system, biopolymer transport protein ExbB 0.35 GFF4921 3'-to-5' exoribonuclease RNase R low > 90
Castellaniella sp019104865 MT123 0.28 ABCV34_RS05335 MotA/TolQ/ExbB proton channel family protein 0.38 ABCV34_RS06625 ribonuclease R low > 48
Pontibacter actiniarum KMM 6156, DSM 19842 0.27 CA264_04950 biopolymer transporter ExbB 0.21 CA264_17355 ribonuclease R — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.26 Echvi_3479 Biopolymer transport proteins 0.21 Echvi_0669 ribonuclease R — —
Pedobacter sp. GW460-11-11-14-LB5 0.23 CA265_RS14740 biopolymer transporter ExbB 0.20 CA265_RS10530 ribonuclease R low > 88
Parabacteroides merdae CL09T00C40 0.20 HMPREF1078_RS10270 MotA/TolQ/ExbB proton channel family protein 0.21 HMPREF1078_RS05885 ribonuclease R low > 61

Not shown: 5 genomes with orthologs for PP_1898 only; 52 genomes with orthologs for PP_4880 only