Conservation of cofitness between PP_0834 and PP_3990 in Pseudomonas putida KT2440

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0834 Sec translocation complex subunit YajC 1.0 PP_3990 substrate or modulator of FtsH-mediated proteolysis 0.28 3
Pseudomonas fluorescens GW456-L13 0.80 PfGW456L13_4881 Preprotein translocase subunit YajC (TC 3.A.5.1.1) 0.91 PfGW456L13_2798 Putative TEGT family carrier/transport protein — —
Pseudomonas sp. RS175 0.80 PFR28_00278 Sec translocon accessory complex subunit YajC 0.93 PFR28_02158 Modulator of FtsH protease YccA — —
Pseudomonas fluorescens FW300-N2E3 0.80 AO353_15795 preprotein translocase subunit YajC 0.92 AO353_22655 hypothetical protein — —
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_3007 Preprotein translocase subunit YajC (TC 3.A.5.1.1) 0.92 Pf1N1B4_5690 Putative TEGT family carrier/transport protein — —
Pseudomonas stutzeri RCH2 0.77 Psest_1243 preprotein translocase, YajC subunit 0.80 Psest_2372 Integral membrane protein, interacts with FtsH — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.77 Psyr_1229 protein translocase subunit yajC 0.92 Psyr_3164 Protein of unknown function UPF0005 — —
Pseudomonas syringae pv. syringae B728a 0.77 Psyr_1229 protein translocase subunit yajC 0.92 Psyr_3164 Protein of unknown function UPF0005 — —
Pseudomonas fluorescens FW300-N2C3 0.76 AO356_06685 preprotein translocase subunit YajC 0.91 AO356_25955 hypothetical protein 0.33 21
Pseudomonas fluorescens FW300-N2E2 0.76 Pf6N2E2_3197 Preprotein translocase subunit YajC (TC 3.A.5.1.1) 0.92 Pf6N2E2_1239 Putative TEGT family carrier/transport protein — —
Marinobacter adhaerens HP15 0.59 HP15_1480 preprotein translocase, YajC subunit 0.49 HP15_1784 protein belonging to uncharacterized protein family UPF0005 — —
Shewanella oneidensis MR-1 0.50 SO3112 yajC preprotein translocase, YajC subunit (NCBI ptt file) 0.35 SO2375 membrane protein, putative (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.50 MIT1002_02812 preprotein translocase subunit YajC 0.36 MIT1002_02167 Modulator of FtsH protease YccA low > 70
Enterobacter asburiae PDN3 0.47 EX28DRAFT_2564 preprotein translocase, YajC subunit 0.43 EX28DRAFT_1964 Integral membrane protein, interacts with FtsH — —
Vibrio cholerae E7946 ATCC 55056 0.46 CSW01_03855 preprotein translocase subunit YajC 0.32 CSW01_06835 BAX inhibitor protein 0.61 4
Serratia liquefaciens MT49 0.46 IAI46_04845 preprotein translocase subunit YajC 0.46 IAI46_08945 FtsH protease modulator YccA low > 86
Escherichia coli BL21 0.46 ECD_00355 SecYEG protein translocase auxillary subunit 0.47 ECD_00974 Modulator of FtsH protease, inner membrane protein — —
Escherichia coli ECRC101 0.46 MCAODC_27725 yajC preprotein translocase subunit YajC 0.48 MCAODC_24560 yccA FtsH protease modulator YccA — —
Escherichia coli ECRC101 0.46 OKFHMN_08500 yajC preprotein translocase subunit YajC 0.48 OKFHMN_05170 yccA FtsH protease modulator YccA — —
Pantoea sp. MT58 0.46 IAI47_14800 preprotein translocase subunit YajC 0.44 IAI47_12580 FtsH protease modulator YccA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_03269 Sec translocon accessory complex subunit YajC 0.47 OHPLBJKB_02696 Modulator of FtsH protease YccA — —
Klebsiella michiganensis M5al 0.46 BWI76_RS06305 preprotein translocase subunit YajC 0.46 BWI76_RS10070 BAX inhibitor protein — —
Escherichia coli BW25113 0.46 b0407 yajC preprotein translocase subunit YajC (NCBI) 0.47 b0970 yccA inner membrane protein (NCBI) 0.27 34
Escherichia coli ECRC62 0.46 BNILDI_22850 yajC preprotein translocase subunit YajC 0.47 BNILDI_19890 yccA FtsH protease modulator YccA — —
Escherichia coli ECOR38 0.46 HEPCGN_07140 yajC preprotein translocase subunit YajC 0.47 HEPCGN_23350 yccA FtsH protease modulator YccA — —
Escherichia coli Nissle 1917 0.46 ECOLIN_RS26255 preprotein translocase subunit YajC 0.47 ECOLIN_RS05100 FtsH protease modulator YccA — —
Escherichia coli ECRC98 0.46 JDDGAC_12155 yajC preprotein translocase subunit YajC 0.48 JDDGAC_08780 yccA FtsH protease modulator YccA — —
Escherichia fergusonii Becca 0.46 EFB2_03650 Sec translocon accessory complex subunit YajC 0.47 EFB2_03101 Modulator of FtsH protease YccA — —
Escherichia coli ECRC99 0.46 KEDOAH_19465 yajC preprotein translocase subunit YajC 0.48 KEDOAH_22565 yccA FtsH protease modulator YccA — —
Escherichia coli ECRC102 0.46 NIAGMN_06555 yajC preprotein translocase subunit YajC 0.48 NIAGMN_02890 yccA FtsH protease modulator YccA — —
Escherichia coli ECOR27 0.46 NOLOHH_01435 yajC preprotein translocase subunit YajC 0.47 NOLOHH_21725 yccA FtsH protease modulator YccA — —
Enterobacter sp. TBS_079 0.45 MPMX20_00998 Sec translocon accessory complex subunit YajC 0.47 MPMX20_01622 Modulator of FtsH protease YccA low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF4306 Preprotein translocase subunit YajC (TC 3.A.5.1.1) 0.43 GFF3263 Putative TEGT family carrier/transport protein — —
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS05690 preprotein translocase subunit YajC 0.24 RALBFv3_RS15250 BAX inhibitor (BI)-1/YccA family protein low > 76
Ralstonia solanacearum UW163 0.45 UW163_RS07935 preprotein translocase subunit YajC 0.24 UW163_RS12715 BAX inhibitor (BI)-1/YccA family protein — —
Rahnella sp. WP5 0.44 EX31_RS22100 preprotein translocase subunit YajC 0.43 EX31_RS17975 FtsH protease modulator YccA — —
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS26645 preprotein translocase subunit YajC 0.26 QEN71_RS05955 Bax inhibitor-1/YccA family protein — —
Paraburkholderia graminis OAS925 0.44 ABIE53_000830 preprotein translocase subunit YajC 0.23 ABIE53_002746 modulator of FtsH protease low > 113
Pectobacterium carotovorum WPP14 0.43 HER17_RS15985 preprotein translocase subunit YajC 0.49 HER17_RS08480 FtsH protease modulator YccA — —
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_04669 protein translocase subunit yajC 0.24 H281DRAFT_00512 hypothetical protein — —
Dickeya dadantii 3937 0.42 DDA3937_RS05475 preprotein translocase subunit YajC 0.48 DDA3937_RS15185 FtsH protease modulator YccA — —
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS03415 preprotein translocase subunit YajC 0.25 BPHYT_RS12600 membrane protein — —
Erwinia tracheiphila SCR3 0.41 LU632_RS18505 yajC preprotein translocase subunit YajC 0.48 LU632_RS10105 yccA FtsH protease modulator YccA low > 74
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS01285 preprotein translocase subunit YajC 0.23 ABZR87_RS10890 Bax inhibitor-1/YccA family protein low > 80
Dechlorosoma suillum PS 0.39 Dsui_3324 preprotein translocase, YajC subunit 0.28 Dsui_2145 FtsH-interacting integral membrane protein — —
Variovorax sp. OAS795 0.38 ABID97_RS01855 preprotein translocase subunit YajC 0.24 ABID97_RS10740 Bax inhibitor-1/YccA family protein low > 91
Castellaniella sp019104865 MT123 0.37 ABCV34_RS15360 preprotein translocase subunit YajC 0.22 ABCV34_RS08305 Bax inhibitor-1 family protein — —
Rhizobium sp. OAE497 0.35 ABIE40_RS08500 preprotein translocase subunit YajC 0.13 ABIE40_RS18250 Bax inhibitor-1/YccA family protein low > 107
Caulobacter crescentus NA1000 Δfur 0.34 CCNA_02071 protein translocase subunit YajC 0.12 CCNA_03778 integral membrane protein — —
Caulobacter crescentus NA1000 0.34 CCNA_02071 protein translocase subunit YajC 0.12 CCNA_03778 integral membrane protein low > 66
Sinorhizobium meliloti 1021 0.33 SMc02058 YAJC protein 0.12 SMc03839 hypothetical protein low > 103

Not shown: 9 genomes with orthologs for PP_0834 only; 17 genomes with orthologs for PP_3990 only