Conservation of cofitness between PP_0794 and PP_2148 in Pseudomonas putida KT2440

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0794 1-phosphofructokinase monomer 1.0 PP_2148 transcription-repair coupling factor 0.42 6
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_1145 1-phosphofructokinase (EC 2.7.1.56) 0.87 Pf1N1B4_3916 Transcription-repair coupling factor — —
Pseudomonas sp. RS175 0.66 PFR28_00106 Tagatose-6-phosphate kinase 0.89 PFR28_01123 Transcription-repair-coupling factor low > 88
Pseudomonas fluorescens FW300-N2E3 0.66 AO353_05480 1-phosphofructokinase 0.89 AO353_00435 transcription-repair coupling factor — —
Pseudomonas fluorescens GW456-L13 0.65 PfGW456L13_5074 1-phosphofructokinase (EC 2.7.1.56) 0.87 PfGW456L13_4027 Transcription-repair coupling factor 0.25 87
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_07330 1-phosphofructokinase (EC 2.7.1.56) (from data) 0.89 AO356_02270 transcription-repair coupling factor low > 104
Pseudomonas simiae WCS417 0.64 PS417_03970 1-phosphofructokinase 0.87 PS417_07635 transcription-repair coupling factor low > 88
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_3338 1-phosphofructokinase (EC 2.7.1.56) 0.89 Pf6N2E2_2278 Transcription-repair coupling factor low > 103
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS04015 1-phosphofructokinase 0.87 PFLU_RS07710 transcription-repair coupling factor low > 109
Pseudomonas fluorescens SBW25 0.63 PFLU_RS04015 1-phosphofructokinase 0.87 PFLU_RS07710 transcription-repair coupling factor low > 109
Pseudomonas stutzeri RCH2 0.60 Psest_3354 1-phosphofructokinase (EC 2.7.1.56) (from data) 0.85 Psest_1653 transcription-repair coupling factor (mfd) low > 67
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_0822 1-phosphofructokinase 0.87 Psyr_1896 transcription-repair coupling factor low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_0822 1-phosphofructokinase 0.87 Psyr_1896 transcription-repair coupling factor low > 86
Vibrio cholerae E7946 ATCC 55056 0.41 CSW01_16825 1-phosphofructokinase 0.56 CSW01_09445 transcription-repair coupling factor low > 62
Pectobacterium carotovorum WPP14 0.38 HER17_RS12860 1-phosphofructokinase 0.55 HER17_RS08775 transcription-repair coupling factor low > 75
Marinobacter adhaerens HP15 0.38 HP15_3724 1-phosphofructokinase 0.62 HP15_2257 transcription-repair-coupling factor low > 73
Serratia liquefaciens MT49 0.36 IAI46_17235 1-phosphofructokinase 0.56 IAI46_10320 transcription-repair coupling factor low > 86
Klebsiella michiganensis M5al 0.36 BWI76_RS19730 1-phosphofructokinase 0.55 BWI76_RS11205 transcription-repair coupling factor low > 92
Pantoea sp. MT58 0.36 IAI47_06655 1-phosphofructokinase 0.55 IAI47_11975 transcription-repair coupling factor low > 76
Escherichia coli ECRC98 0.36 JDDGAC_27400 fruB fused PTS fructose transporter subunit IIA/HPr protein 0.55 JDDGAC_07130 mfd transcription-repair coupling factor — —
Escherichia coli ECOR27 0.36 NOLOHH_15015 fruB fused PTS fructose transporter subunit IIA/HPr protein 0.55 NOLOHH_20995 mfd transcription-repair coupling factor 0.74 49
Escherichia coli ECOR38 0.36 HEPCGN_22705 fruB fused PTS fructose transporter subunit IIA/HPr protein 0.55 HEPCGN_24015 mfd transcription-repair coupling factor low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_01542 Tagatose-6-phosphate kinase 0.55 OHPLBJKB_02552 Transcription-repair-coupling factor low > 73
Escherichia coli ECRC62 0.36 BNILDI_13935 fruB fused PTS fructose transporter subunit IIA/HPr protein 0.55 BNILDI_19160 mfd transcription-repair coupling factor — —
Escherichia coli ECRC102 0.36 NIAGMN_21205 fruB fused PTS fructose transporter subunit IIA/HPr protein 0.55 NIAGMN_24360 mfd transcription-repair coupling factor — —
Dickeya dianthicola 67-19 0.36 HGI48_RS09265 1-phosphofructokinase 0.55 HGI48_RS13065 transcription-repair coupling factor 0.60 33
Escherichia coli BW25113 0.36 b2168 fruK 1-phosphofructokinase (NCBI) 0.55 b1114 mfd transcription-repair coupling factor (NCBI) low > 76
Escherichia fergusonii Becca 0.36 EFB2_01689 Tagatose-6-phosphate kinase 0.55 EFB2_02861 Transcription-repair-coupling factor low > 86
Dickeya dianthicola ME23 0.36 DZA65_RS09570 1-phosphofructokinase 0.55 DZA65_RS13530 transcription-repair coupling factor 0.53 24
Escherichia coli ECRC99 0.36 KEDOAH_04745 fruB fused PTS fructose transporter subunit IIA/HPr protein 0.55 KEDOAH_24285 mfd transcription-repair coupling factor — —
Escherichia coli ECRC101 0.36 MCAODC_14490 fruB fused PTS fructose transporter subunit IIA/HPr protein 0.55 MCAODC_22830 mfd transcription-repair coupling factor — —
Escherichia coli ECRC101 0.36 OKFHMN_23440 fruB fused PTS fructose transporter subunit IIA/HPr protein 0.55 OKFHMN_03470 mfd transcription-repair coupling factor — —
Rahnella sp. WP5 0.36 EX31_RS19070 1-phosphofructokinase 0.55 EX31_RS24520 transcription-repair coupling factor low > 89
Escherichia coli BL21 0.36 ECD_02097 fructose-1-phosphate kinase 0.55 ECD_01110 transcription-repair coupling factor low > 60
Dickeya dadantii 3937 0.36 DDA3937_RS09235 1-phosphofructokinase 0.55 DDA3937_RS13000 transcription-repair coupling factor low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF3772 1-phosphofructokinase (EC 2.7.1.56) 0.55 GFF3397 Transcription-repair coupling factor low > 78
Enterobacter sp. TBS_079 0.35 MPMX20_03132 Tagatose-6-phosphate kinase 0.54 MPMX20_01795 Transcription-repair-coupling factor low > 85
Enterobacter asburiae PDN3 0.35 EX28DRAFT_0395 1-phosphofructokinase 0.54 EX28DRAFT_1816 transcription-repair coupling factor (mfd) low > 76
Erwinia tracheiphila SCR3 0.35 LU632_RS17320 fruK 1-phosphofructokinase 0.54 LU632_RS14730 mfd transcription-repair coupling factor low > 74
Rhodospirillum rubrum S1H 0.31 Rru_A1971 PfkB (NCBI) 0.33 Rru_A1726 Transcription-repair coupling factor (NCBI) low > 58
Ralstonia solanacearum PSI07 0.28 RPSI07_RS10875 1-phosphofructokinase 0.48 RPSI07_RS16040 transcription-repair coupling factor low > 81
Ralstonia solanacearum GMI1000 0.28 RS_RS14315 1-phosphofructokinase 0.49 RS_RS08275 transcription-repair coupling factor low > 80
Azospirillum sp. SherDot2 0.28 MPMX19_05330 Tagatose-6-phosphate kinase 0.33 MPMX19_00876 Transcription-repair-coupling factor — —
Ralstonia solanacearum UW163 0.27 UW163_RS07260 1-phosphofructokinase 0.49 UW163_RS14755 transcription-repair coupling factor — —
Ralstonia solanacearum IBSBF1503 0.27 RALBFv3_RS06365 1-phosphofructokinase 0.49 RALBFv3_RS01445 transcription-repair coupling factor low > 76
Ralstonia sp. UNC404CL21Col 0.27 ABZR87_RS02045 1-phosphofructokinase 0.50 ABZR87_RS13240 transcription-repair coupling factor low > 80
Paraburkholderia graminis OAS925 0.26 ABIE53_004212 1-phosphofructokinase 0.50 ABIE53_002095 transcription-repair coupling factor (superfamily II helicase) 0.26 79
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.2175.1 1-phosphofructokinase (EC 2.7.1.56) 0.53 Xcc-8004.1775.1 Transcription-repair coupling factor low > 74
Dyella japonica UNC79MFTsu3.2 0.22 ABZR86_RS20675 1-phosphofructokinase family hexose kinase 0.56 ABZR86_RS21210 transcription-repair coupling factor low > 74
Acidovorax sp. GW101-3H11 0.18 Ac3H11_779 Tagatose-6-phosphate kinase (EC 2.7.1.144) / 1-phosphofructokinase (EC 2.7.1.56) 0.48 Ac3H11_328 Transcription-repair coupling factor low > 79
Rhodopseudomonas palustris CGA009 0.17 TX73_001970 1-phosphofructokinase family hexose kinase 0.33 TX73_013805 transcription-repair coupling factor low > 86
Dinoroseobacter shibae DFL-12 0.16 Dshi_1621 PfkB domain protein (RefSeq) 0.33 Dshi_1561 transcription-repair coupling factor (RefSeq) low > 64

Not shown: 5 genomes with orthologs for PP_0794 only; 36 genomes with orthologs for PP_2148 only