Conservation of cofitness between PP_1649 and PP_2145 in Pseudomonas putida KT2440

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1649 D-lactate dehydrogenase 1.0 PP_2145 beta-N-acetylglucosaminidase 0.14 19
Pseudomonas fluorescens FW300-N2E3 0.80 AO353_02740 hydroxyacid dehydrogenase 0.86 AO353_00455 beta-hexosaminidase low > 101
Pseudomonas fluorescens FW300-N2E2 0.79 Pf6N2E2_5719 D-lactate dehydrogenase (EC 1.1.1.28) 0.82 Pf6N2E2_2281 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) low > 103
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_3500 D-lactate dehydrogenase (EC 1.1.1.28) 0.85 Pf1N1B4_3912 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) — —
Pseudomonas fluorescens FW300-N2C3 0.79 AO356_19040 hydroxyacid dehydrogenase 0.83 AO356_02285 beta-hexosaminidase low > 104
Pseudomonas fluorescens GW456-L13 0.78 PfGW456L13_2028 D-lactate dehydrogenase (EC 1.1.1.28) 0.86 PfGW456L13_4031 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) low > 87
Pseudomonas simiae WCS417 0.78 PS417_16375 2-hydroxyacid dehydrogenase 0.85 PS417_07620 beta-hexosaminidase 0.30 15
Pseudomonas fluorescens SBW25-INTG 0.77 PFLU_RS18415 2-hydroxyacid dehydrogenase 0.85 PFLU_RS07695 beta-N-acetylhexosaminidase low > 109
Pseudomonas fluorescens SBW25 0.77 PFLU_RS18415 2-hydroxyacid dehydrogenase 0.85 PFLU_RS07695 beta-N-acetylhexosaminidase low > 109
Pseudomonas sp. RS175 0.77 PFR28_03228 D-lactate dehydrogenase 0.85 PFR28_01119 Beta-hexosaminidase low > 88
Pseudomonas stutzeri RCH2 0.69 Psest_4064 Lactate dehydrogenase and related dehydrogenases 0.75 Psest_2643 Beta-glucosidase-related glycosidases low > 67
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS07830 2-hydroxyacid dehydrogenase 0.44 RALBFv3_RS14510 beta-N-acetylhexosaminidase low > 76
Ralstonia solanacearum UW163 0.68 UW163_RS05795 2-hydroxyacid dehydrogenase 0.44 UW163_RS11975 beta-N-acetylhexosaminidase — —
Pseudomonas sp. S08-1 0.68 OH686_18940 D-lactate dehydrogenase 0.84 OH686_21975 beta-N-acetylglucosaminidase low > 80
Ralstonia sp. UNC404CL21Col 0.66 ABZR87_RS03505 2-hydroxyacid dehydrogenase 0.42 ABZR87_RS10230 beta-N-acetylhexosaminidase low > 80
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS03835 D-lactate dehydrogenase 0.44 BPHYT_RS14345 beta-hexosaminidase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_04746 D-lactate dehydrogenase 0.44 H281DRAFT_04367 beta-N-acetylhexosaminidase low > 103
Ralstonia solanacearum GMI1000 0.66 RS_RS15730 2-hydroxyacid dehydrogenase 0.43 RS_RS05290 beta-N-acetylhexosaminidase low > 80
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS26130 2-hydroxyacid dehydrogenase 0.43 QEN71_RS04635 beta-N-acetylhexosaminidase low > 153
Paraburkholderia graminis OAS925 0.65 ABIE53_000908 D-lactate dehydrogenase 0.44 ABIE53_003031 beta-N-acetylhexosaminidase low > 113
Ralstonia solanacearum PSI07 0.64 RPSI07_RS09445 2-hydroxyacid dehydrogenase 0.43 RPSI07_RS18950 beta-N-acetylhexosaminidase low > 81
Agrobacterium fabrum C58 0.56 Atu3870 D-lactate dehydrogenase 0.23 Atu1709 glycosyl hydrolase low > 89
Vibrio cholerae E7946 ATCC 55056 0.55 CSW01_14945 2-hydroxyacid dehydrogenase 0.40 CSW01_03620 beta-hexosaminidase low > 62
Shewanella amazonensis SB2B 0.55 Sama_0612 D-lactate dehydrogenase (RefSeq) 0.41 Sama_1326 beta-hexosaminidase (RefSeq) low > 62
Shewanella sp. ANA-3 0.54 Shewana3_3319 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) 0.42 Shewana3_2293 beta-hexosaminidase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.54 SO0968 ldhA D-lactate dehydrogenase (NCBI ptt file) 0.42 SO2250 nagZ beta-hexosaminidase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.54 Shew_0787 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) 0.42 Shew_1626 beta-hexosaminidase (RefSeq) low > 60
Herbaspirillum seropedicae SmR1 0.53 HSERO_RS12550 D-lactate dehydrogenase 0.42 HSERO_RS09685 beta-hexosaminidase — —
Klebsiella michiganensis M5al 0.52 BWI76_RS12790 lactate dehydrogenase 0.44 BWI76_RS11165 beta-N-acetylhexosaminidase low > 92
Escherichia coli BW25113 0.52 b1380 ldhA D-lactate dehydrogenase (NCBI) 0.43 b1107 nagZ beta-hexosaminidase (NCBI) low > 76
Escherichia coli ECOR27 0.52 NOLOHH_19530 ldhA D-lactate dehydrogenase 0.44 NOLOHH_21035 nagZ beta-N-acetylhexosaminidase low > 57
Escherichia coli ECOR38 0.52 HEPCGN_26050 ldhA D-lactate dehydrogenase 0.43 HEPCGN_23980 nagZ beta-N-acetylhexosaminidase low > 85
Escherichia coli Nissle 1917 0.51 ECOLIN_RS08110 D-lactate dehydrogenase 0.43 ECOLIN_RS06390 beta-N-acetylhexosaminidase low > 52
Escherichia coli ECRC101 0.51 MCAODC_16140 ldhA D-lactate dehydrogenase 0.43 MCAODC_22865 nagZ beta-N-acetylhexosaminidase — —
Escherichia coli ECRC98 0.51 JDDGAC_04285 ldhA D-lactate dehydrogenase 0.43 JDDGAC_07165 nagZ beta-N-acetylhexosaminidase — —
Escherichia coli BL21 0.51 ECD_01352 fermentative D-lactate dehydrogenase, NAD-dependent 0.43 ECD_01103 beta N-acetyl-glucosaminidase low > 60
Escherichia coli ECRC101 0.51 OKFHMN_01795 ldhA D-lactate dehydrogenase 0.43 OKFHMN_03505 nagZ beta-N-acetylhexosaminidase — —
Escherichia coli ECRC99 0.51 KEDOAH_26640 ldhA D-lactate dehydrogenase 0.43 KEDOAH_24250 nagZ beta-N-acetylhexosaminidase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_02331 D-lactate dehydrogenase 0.43 OHPLBJKB_02559 Beta-hexosaminidase low > 73
Escherichia coli ECRC62 0.51 BNILDI_17985 ldhA D-lactate dehydrogenase 0.44 BNILDI_19195 nagZ beta-N-acetylhexosaminidase — —
Escherichia fergusonii Becca 0.51 EFB2_02576 D-lactate dehydrogenase 0.43 EFB2_02868 Beta-hexosaminidase low > 86
Escherichia coli ECRC102 0.51 NIAGMN_25930 ldhA D-lactate dehydrogenase 0.43 NIAGMN_24325 nagZ beta-N-acetylhexosaminidase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF2638 D-lactate dehydrogenase (EC 1.1.1.28) 0.43 GFF3390 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) low > 78
Pantoea sp. MT58 0.51 IAI47_09495 2-hydroxyacid dehydrogenase 0.43 IAI47_11995 beta-N-acetylhexosaminidase low > 76
Enterobacter sp. TBS_079 0.50 MPMX20_02132 D-lactate dehydrogenase 0.43 MPMX20_01788 Beta-hexosaminidase low > 85
Enterobacter asburiae PDN3 0.50 EX28DRAFT_1435 Lactate dehydrogenase and related dehydrogenases 0.43 EX28DRAFT_1823 Beta-glucosidase-related glycosidases low > 76
Alteromonas macleodii MIT1002 0.50 MIT1002_01974 D-lactate dehydrogenase 0.37 MIT1002_01643 Beta-hexosaminidase low > 70
Serratia liquefaciens MT49 0.50 IAI46_13355 2-hydroxyacid dehydrogenase 0.44 IAI46_09900 beta-N-acetylhexosaminidase low > 86
Rahnella sp. WP5 0.49 EX31_RS06470 2-hydroxyacid dehydrogenase 0.42 EX31_RS24500 beta-N-acetylhexosaminidase low > 89
Dickeya dadantii 3937 0.49 DDA3937_RS12295 2-hydroxyacid dehydrogenase 0.41 DDA3937_RS13050 beta-N-acetylhexosaminidase low > 74
Pectobacterium carotovorum WPP14 0.47 HER17_RS09630 2-hydroxyacid dehydrogenase 0.44 HER17_RS08725 beta-N-acetylhexosaminidase low > 75

Not shown: 13 genomes with orthologs for PP_1649 only; 26 genomes with orthologs for PP_2145 only