| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_4734 | | DNA-binding transcriptional dual regulator, LldR-L-lactate | 1.0 | PP_1656 | | ATP:GTP 3'-pyrophosphotransferase | 0.24 | 5 |
| Pseudomonas fluorescens SBW25-INTG | 0.87 | PFLU_RS25940 | | FCD domain-containing protein | 0.91 | PFLU_RS22095 | | GTP diphosphokinase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.87 | PFLU_RS25940 | | FCD domain-containing protein | 0.91 | PFLU_RS22095 | | GTP diphosphokinase | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.87 | AO356_07545 | | transcriptional regulator PdhR | 0.92 | AO356_19060 | | (p)ppGpp synthetase | 0.35 | 12 |
| Pseudomonas fluorescens FW300-N1B4 | 0.86 | Pf1N1B4_1185 | | Lactate-responsive regulator LldR in Enterobacteria, GntR family | 0.92 | Pf1N1B4_3508 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.86 | Pf6N2E2_3379 | | Lactate-responsive regulator LldR in Enterobacteria, GntR family | 0.92 | Pf6N2E2_5723 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | low | > 103 |
| Pseudomonas sp. RS175 | 0.86 | PFR28_00064 | | Pyruvate dehydrogenase complex repressor | 0.91 | PFR28_03223 | | GTP pyrophosphokinase | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.85 | PfGW456L13_5113 | | Lactate-responsive regulator LldR in Enterobacteria, GntR family | 0.91 | PfGW456L13_2035 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.85 | AO353_05695 | | transcriptional regulator PdhR | 0.92 | AO353_02710 | | (p)ppGpp synthetase | low | > 101 |
| Pseudomonas simiae WCS417 | 0.84 | PS417_24100 | | transcriptional regulator PdhR | 0.91 | PS417_20150 | | (p)ppGpp synthetase | — | — |
| Pseudomonas stutzeri RCH2 | 0.76 | Psest_0956 | | Transcriptional regulators | 0.87 | Psest_1640 | | (p)ppGpp synthetase, RelA/SpoT family | low | > 67 |
| Pseudomonas sp. S08-1 | 0.75 | OH686_17020 | | Lactate-responsive regulator LldR in Enterobacteria, GntR family | 0.87 | OH686_18960 | | Inactive (p)ppGpp 3'-pyrophosphohydrolase domain / GTP pyrophosphokinase , (p)ppGpp synthetase I | low | > 80 |
| Marinobacter adhaerens HP15 | 0.63 | HP15_4087 | | transcriptional regulator, GntR family | 0.63 | HP15_791 | | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA | low | > 73 |
| Enterobacter asburiae PDN3 | 0.40 | EX28DRAFT_3708 | | Transcriptional regulators | 0.46 | EX28DRAFT_2864 | | (p)ppGpp synthetase, RelA/SpoT family | low | > 76 |
| Enterobacter sp. TBS_079 | 0.40 | MPMX20_00806 | | Pyruvate dehydrogenase complex repressor | 0.45 | MPMX20_03653 | | GTP pyrophosphokinase | 0.23 | 40 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.40 | OHPLBJKB_03548 | | Pyruvate dehydrogenase complex repressor | 0.46 | OHPLBJKB_00947 | | GTP pyrophosphokinase | low | > 73 |
| Escherichia coli BL21 | 0.40 | ECD_00112 | | pyruvate dehydrogenase complex repressor; autorepressor | 0.46 | ECD_02629 | | (p)ppGpp synthetase I/GTP pyrophosphokinase | low | > 60 |
| Escherichia coli Nissle 1917 | 0.40 | ECOLIN_RS00635 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.46 | ECOLIN_RS15515 | | GTP diphosphokinase | low | > 52 |
| Escherichia fergusonii Becca | 0.40 | EFB2_03932 | | Pyruvate dehydrogenase complex repressor | 0.46 | EFB2_01133 | | GTP pyrophosphokinase | low | > 86 |
| Escherichia coli BW25113 | 0.40 | b0113 | pdhR | transcriptional regulator of pyruvate dehydrogenase complex (NCBI) | 0.46 | b2784 | relA | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | low | > 76 |
| Escherichia coli ECRC98 | 0.40 | JDDGAC_14105 | pdhR | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.46 | JDDGAC_23915 | relA | GTP diphosphokinase | — | — |
| Escherichia coli ECRC62 | 0.40 | BNILDI_08755 | pdhR | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.46 | BNILDI_10630 | relA | GTP diphosphokinase | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.40 | CSW01_12225 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.45 | CSW01_12405 | | GTP diphosphokinase | low | > 62 |
| Escherichia coli ECOR27 | 0.40 | NOLOHH_02855 | pdhR | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.46 | NOLOHH_12125 | relA | GTP diphosphokinase | low | > 57 |
| Escherichia coli ECOR38 | 0.40 | HEPCGN_08490 | pdhR | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.46 | HEPCGN_19500 | relA | GTP diphosphokinase | low | > 85 |
| Escherichia coli ECRC101 | 0.40 | OKFHMN_10510 | pdhR | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.46 | OKFHMN_20250 | relA | GTP diphosphokinase | — | — |
| Escherichia coli ECRC101 | 0.40 | MCAODC_01025 | pdhR | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.46 | MCAODC_10775 | relA | GTP diphosphokinase | — | — |
| Escherichia coli ECRC102 | 0.40 | NIAGMN_08360 | pdhR | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.46 | NIAGMN_18020 | relA | GTP diphosphokinase | — | — |
| Escherichia coli ECRC99 | 0.40 | KEDOAH_17645 | pdhR | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.46 | KEDOAH_07880 | relA | GTP diphosphokinase | — | — |
| Dickeya dianthicola 67-19 | 0.39 | HGI48_RS17855 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.46 | HGI48_RS17070 | | GTP diphosphokinase | low | > 71 |
| Dickeya dadantii 3937 | 0.39 | DDA3937_RS17930 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.46 | DDA3937_RS17015 | | GTP diphosphokinase | low | > 74 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.39 | GFF123 | | Transcriptional repressor for pyruvate dehydrogenase complex | 0.46 | GFF4837 | | 'GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)' transl_table=11 | low | > 78 |
| Shewanella loihica PV-4 | 0.39 | Shew_3432 | pdhR | transcriptional regulator PdhR (RefSeq) | 0.47 | Shew_1202 | | (p)ppGpp synthetase I, SpoT/RelA (RefSeq) | low | > 60 |
| Dickeya dianthicola ME23 | 0.39 | DZA65_RS19005 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.46 | DZA65_RS18145 | | GTP diphosphokinase | low | > 75 |
| Serratia liquefaciens MT49 | 0.39 | IAI46_21330 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.46 | IAI46_03600 | | GTP diphosphokinase | low | > 86 |
| Shewanella sp. ANA-3 | 0.39 | Shewana3_0425 | pdhR | transcriptional regulator PdhR (RefSeq) | 0.48 | Shewana3_1111 | | (p)ppGpp synthetase I, SpoT/RelA (RefSeq) | low | > 73 |
| Klebsiella michiganensis M5al | 0.39 | BWI76_RS04875 | | transcriptional regulator PdhR | 0.46 | BWI76_RS22805 | | GTP diphosphokinase | low | > 92 |
| Shewanella amazonensis SB2B | 0.39 | Sama_0374 | pdhR | transcriptional regulator PdhR (RefSeq) | 0.47 | Sama_1033 | | GTP diphosphokinase (RefSeq) | 0.53 | 29 |
| Shewanella oneidensis MR-1 | 0.39 | SO0423 | pdhR | pyruvate dehydrogenase complex repressor (NCBI ptt file) | 0.48 | SO3455 | relA | GTP pyrophosphokinase (NCBI ptt file) | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.38 | HER17_RS03285 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.47 | HER17_RS04115 | | GTP diphosphokinase | low | > 75 |
| Pantoea sp. MT58 | 0.38 | IAI47_15815 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.46 | IAI47_04120 | | GTP diphosphokinase | low | > 76 |
| Rahnella sp. WP5 | 0.38 | EX31_RS03485 | | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.48 | EX31_RS07955 | | GTP diphosphokinase | low | > 89 |
| Erwinia tracheiphila SCR3 | 0.37 | LU632_RS03075 | pdhR | pyruvate dehydrogenase complex transcriptional repressor PdhR | 0.47 | LU632_RS06350 | relA | GTP diphosphokinase | low | > 74 |
| Alteromonas macleodii MIT1002 | 0.34 | MIT1002_03004 | | Pyruvate dehydrogenase complex repressor | 0.45 | MIT1002_00794 | | GTP pyrophosphokinase | low | > 70 |
| Castellaniella sp019104865 MT123 | 0.33 | ABCV34_RS10290 | | transcriptional regulator LldR | 0.36 | ABCV34_RS08440 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 48 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.30 | H281DRAFT_02906 | | transcriptional regulator, GntR family | 0.38 | H281DRAFT_04499 | | GTP pyrophosphokinase | low | > 103 |
| Cupriavidus basilensis FW507-4G11 | 0.29 | RR42_RS21300 | | GntR family transcriptional regulator | 0.39 | RR42_RS06585 | | GTP pyrophosphokinase | low | > 128 |
| Burkholderia phytofirmans PsJN | 0.29 | BPHYT_RS26990 | | GntR family transcriptional regulator | 0.38 | BPHYT_RS13655 | | GTP pyrophosphokinase | low | > 109 |
| Paraburkholderia graminis OAS925 | 0.29 | ABIE53_005884 | | GntR family transcriptional repressor for pyruvate dehydrogenase complex | 0.38 | ABIE53_002905 | | GTP pyrophosphokinase | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.28 | QEN71_RS10135 | | FadR/GntR family transcriptional regulator | 0.39 | QEN71_RS05265 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 153 |
| Acinetobacter radioresistens SK82 | 0.27 | MPMX26_02258 | | Putative L-lactate dehydrogenase operon regulatory protein | 0.43 | MPMX26_00539 | | GTP pyrophosphokinase | low | > 36 |
| Bifidobacterium breve UCC2003 | 0.13 | BBR_RS11160 | | FadR family transcriptional regulator | 0.30 | BBR_RS16410 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Kangiella aquimarina DSM 16071 | 0.11 | B158DRAFT_2208 | | transcriptional regulator, GntR family | 0.43 | B158DRAFT_2277 | | (p)ppGpp synthetase, RelA/SpoT family | low | > 40 |
Not shown: 14 genomes with orthologs for PP_4734 only; 24 genomes with orthologs for PP_1656 only