Conservation of cofitness between PP_4015 and PP_1527 in Pseudomonas putida KT2440

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4015 HflD-like high frequency lysogenization protein 1.0 PP_1527 tRNA threonylcarbamoyladenosine dehydratase (t(6)A37 dehydratase) 0.17 15
Pseudomonas fluorescens FW300-N2E2 0.86 Pf6N2E2_285 FIG002903: a protein of unknown function perhaps involved in purine metabolism 0.81 Pf6N2E2_3081 HesA/MoeB/ThiF family protein related to EC-YgdL low > 103
Pseudomonas sp. RS175 0.86 PFR28_02620 High frequency lysogenization protein HflD 0.81 PFR28_00387 tRNA threonylcarbamoyladenosine dehydratase low > 88
Pseudomonas fluorescens FW300-N2C3 0.85 AO356_22105 DNA repair protein 0.81 AO356_06085 thiamine biosynthesis protein ThiF — —
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_2638 FIG002903: a protein of unknown function perhaps involved in purine metabolism 0.81 PfGW456L13_4719 HesA/MoeB/ThiF family protein related to EC-YgdL low > 87
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_27710 DNA repair protein 0.81 AO353_16420 thiamine biosynthesis protein ThiF low > 101
Pseudomonas fluorescens FW300-N1B4 0.84 Pf1N1B4_4047 FIG002903: a protein of unknown function perhaps involved in purine metabolism 0.81 Pf1N1B4_3074 HesA/MoeB/ThiF family protein related to EC-YgdL low > 87
Pseudomonas fluorescens SBW25-INTG 0.83 PFLU_RS18585 high frequency lysogenization protein HflD 0.82 PFLU_RS06230 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 109
Pseudomonas fluorescens SBW25 0.83 PFLU_RS18585 high frequency lysogenization protein HflD 0.82 PFLU_RS06230 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 109
Pseudomonas simiae WCS417 0.83 PS417_16545 DNA repair protein 0.81 PS417_06165 thiamine biosynthesis protein ThiF — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_3191 Protein of unknown function DUF489 0.77 Psyr_1333 UBA/THIF-type NAD/FAD binding fold protein low > 86
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_3191 Protein of unknown function DUF489 0.77 Psyr_1333 UBA/THIF-type NAD/FAD binding fold protein low > 86
Pseudomonas sp. S08-1 0.79 OH686_00205 High frequency lysogenization protein HflD 0.75 OH686_06545 HesA/MoeB/ThiF family protein low > 80
Pseudomonas stutzeri RCH2 0.77 Psest_2020 Uncharacterized protein involved in purine metabolism 0.76 Psest_1619 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 low > 67
Marinobacter adhaerens HP15 0.47 HP15_2087 protein belonging to uncharacterized protein family UPF0274 0.56 HP15_266 UBA/THIF-type NAD/FAD binding protein low > 73
Pectobacterium carotovorum WPP14 0.38 HER17_RS11630 high frequency lysogenization protein HflD 0.56 HER17_RS16435 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 75
Serratia liquefaciens MT49 0.36 IAI46_10435 high frequency lysogenization protein HflD 0.56 IAI46_20360 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 86
Escherichia coli ECOR27 0.36 NOLOHH_20905 hflD high frequency lysogenization protein HflD 0.56 NOLOHH_11975 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA — —
Escherichia coli ECRC62 0.36 BNILDI_19070 hflD high frequency lysogenization protein HflD 0.56 BNILDI_10480 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA — —
Escherichia coli ECOR38 0.36 HEPCGN_24215 hflD high frequency lysogenization protein HflD 0.56 HEPCGN_19350 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 85
Escherichia fergusonii Becca 0.36 EFB2_02843 High frequency lysogenization protein HflD 0.56 EFB2_01105 tRNA threonylcarbamoyladenosine dehydratase low > 86
Escherichia coli BL21 0.36 ECD_01130 putative lysogenization regulator 0.56 ECD_02663 tRNA threonylcarbamoyladenosine dehydratase; sulfur acceptor for CsdA low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_02536 High frequency lysogenization protein HflD 0.56 OHPLBJKB_00919 tRNA threonylcarbamoyladenosine dehydratase low > 73
Escherichia coli BW25113 0.36 b1132 hflD hypothetical protein (NCBI) 0.56 b2812 ygdL hypothetical protein (NCBI) low > 76
Escherichia coli Nissle 1917 0.36 ECOLIN_RS06620 high frequency lysogenization protein HflD 0.56 ECOLIN_RS15670 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA — —
Klebsiella michiganensis M5al 0.35 BWI76_RS11310 lysogenization protein HflD 0.53 BWI76_RS22975 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA — —
Escherichia coli ECRC102 0.35 NIAGMN_24885 hflD high frequency lysogenization protein HflD 0.55 NIAGMN_17865 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA — —
Escherichia coli ECRC101 0.35 OKFHMN_00740 hflD high frequency lysogenization protein HflD 0.55 OKFHMN_20095 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA — —
Escherichia coli ECRC101 0.35 MCAODC_22345 hflD high frequency lysogenization protein HflD 0.55 MCAODC_10620 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA — —
Escherichia coli ECRC98 0.35 JDDGAC_06625 hflD high frequency lysogenization protein HflD 0.55 JDDGAC_23760 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA — —
Escherichia coli ECRC99 0.35 KEDOAH_24825 hflD high frequency lysogenization protein HflD 0.55 KEDOAH_08035 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA — —
Alteromonas macleodii MIT1002 0.35 MIT1002_01827 High frequency lysogenization protein HflD 0.55 MIT1002_01936 Molybdopterin-synthase adenylyltransferase low > 70
Dickeya dianthicola ME23 0.34 DZA65_RS11870 high frequency lysogenization protein HflD 0.54 DZA65_RS05375 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 75
Dickeya dianthicola 67-19 0.34 HGI48_RS11535 high frequency lysogenization protein HflD 0.54 HGI48_RS05035 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 71
Enterobacter sp. TBS_079 0.34 MPMX20_01816 High frequency lysogenization protein HflD 0.54 MPMX20_03675 tRNA threonylcarbamoyladenosine dehydratase low > 85
Rahnella sp. WP5 0.34 EX31_RS24570 high frequency lysogenization protein HflD 0.55 EX31_RS13130 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 89
Enterobacter asburiae PDN3 0.34 EX28DRAFT_1798 Uncharacterized protein involved in purine metabolism 0.54 EX28DRAFT_2888 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 — —
Shewanella loihica PV-4 0.34 Shew_1559 hypothetical protein (RefSeq) 0.54 Shew_3251 UBA/THIF-type NAD/FAD binding protein (RefSeq) low > 60
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF3417 FIG002903: a protein of unknown function perhaps involved in purine metabolism 0.56 GFF4870 CsdL (EC-YgdL) protein of the HesA/MoeB/ThiF family, part of the CsdA-E-L sulfur transfer pathway low > 78
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_05720 lysogenization protein HflD 0.54 CSW01_11750 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA — —
Pantoea sp. MT58 0.33 IAI47_11920 high frequency lysogenization protein HflD 0.56 IAI47_04005 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 76
Erwinia tracheiphila SCR3 0.33 LU632_RS14580 hflD high frequency lysogenization protein HflD 0.56 LU632_RS06230 tcdA tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 74
Dickeya dadantii 3937 0.33 DDA3937_RS11490 high frequency lysogenization protein HflD 0.55 DDA3937_RS05030 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA low > 74
Shewanella amazonensis SB2B 0.31 Sama_2063 hypothetical protein (RefSeq) 0.57 Sama_0546 HesA/MoeB/ThiF family protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.30 Shewana3_1746 hypothetical protein (RefSeq) 0.56 Shewana3_0735 UBA/THIF-type NAD/FAD binding protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.30 SO2634 conserved hypothetical protein (NCBI ptt file) 0.54 SO3895 HesA/MoeB/ThiF family protein (NCBI ptt file) low > 76
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_06870 hflD high frequency lysogenization protein HflD 0.44 OKGIIK_03630 tcdA tRNA A37 threonylcarbamoyladenosine dehydratase low > 52
Rhodanobacter denitrificans MT42 0.29 LRK55_RS00180 high frequency lysogenization protein HflD 0.46 LRK55_RS14520 tRNA threonylcarbamoyladenosine dehydratase low > 63
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS00440 high frequency lysogenization protein HflD 0.46 LRK54_RS14805 tRNA threonylcarbamoyladenosine dehydratase low > 59
Kangiella aquimarina DSM 16071 0.26 B158DRAFT_1840 Uncharacterized protein involved in purine metabolism 0.44 B158DRAFT_0922 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 low > 40
Lysobacter sp. OAE881 0.26 ABIE51_RS11515 high frequency lysogenization protein HflD 0.45 ABIE51_RS12585 tRNA threonylcarbamoyladenosine dehydratase low > 62
Xanthomonas campestris pv. campestris strain 8004 0.24 Xcc-8004.2759.1 FIG002903: a protein of unknown function perhaps involved in purine metabolism 0.40 Xcc-8004.3494.1 Molybdopterin biosynthesis protein MoeB low > 74
Dyella japonica UNC79MFTsu3.2 0.24 ABZR86_RS02180 high frequency lysogenization protein HflD 0.48 ABZR86_RS00565 ThiF family adenylyltransferase low > 74
Acinetobacter radioresistens SK82 0.22 MPMX26_01047 High frequency lysogenization protein HflD 0.38 MPMX26_00481 tRNA threonylcarbamoyladenosine dehydratase low > 36

Not shown: 0 genomes with orthologs for PP_4015 only; 22 genomes with orthologs for PP_1527 only