Conservation of cofitness between OKFHMN_07410 and OKFHMN_17080 in Escherichia coli ECRC100

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC100 1.0 OKFHMN_07410 tatE deaminated glutathione amidase 1.0 OKFHMN_17080 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA 0.68 20
Escherichia coli ECRC99 1.00 KEDOAH_20560 tatE deaminated glutathione amidase 1.00 KEDOAH_11060 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA — —
Escherichia coli ECRC101 1.00 MCAODC_26625 tatE deaminated glutathione amidase 1.00 MCAODC_07610 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 87
Escherichia coli ECRC102 1.00 NIAGMN_05465 tatE deaminated glutathione amidase 1.00 NIAGMN_14850 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA — —
Escherichia coli ECRC98 1.00 JDDGAC_11055 tatE deaminated glutathione amidase 1.00 JDDGAC_20710 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 86
Escherichia coli ECOR27 1.00 NOLOHH_23785 tatE deaminated glutathione amidase 1.00 NOLOHH_08870 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 75
Escherichia coli BL21 1.00 ECD_00595 putative NAD(P)-binding amidase-type enzyme YbeM (C-N hydrolase family) 1.00 ECD_03248 penicillin-binding protein 1a, murein transglycosylase and transpeptidase low > 61
Escherichia coli ECOR38 0.99 HEPCGN_00865 tatE deaminated glutathione amidase 1.00 HEPCGN_15900 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03080 Deaminated glutathione amidase 1.00 OHPLBJKB_00307 Penicillin-binding protein 1A low > 73
Escherichia coli ECRC62 0.99 BNILDI_21795 tatE deaminated glutathione amidase 1.00 BNILDI_02650 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS03410 deaminated glutathione amidase 1.00 ECOLIN_RS19395 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA — —
Escherichia fergusonii Becca 0.99 EFB2_03466 Deaminated glutathione amidase 1.00 EFB2_00432 Penicillin-binding protein 1A low > 86
Enterobacter asburiae PDN3 0.74 EX28DRAFT_2337 Predicted amidohydrolase 0.90 EX28DRAFT_4146 penicillin-binding protein, 1A family low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF4538 Aliphatic amidase AmiE (EC 3.5.1.4) 0.94 GFF623 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) low > 78
Enterobacter sp. TBS_079 0.72 MPMX20_01285 Deaminated glutathione amidase 0.91 MPMX20_04284 Penicillin-binding protein 1A low > 85
Klebsiella michiganensis M5al 0.71 BWI76_RS07990 carbon-nitrogen hydrolase 0.88 BWI76_RS26125 carboxypeptidase/penicillin-binding protein 1A — —
Pantoea sp. MT58 0.61 IAI47_14065 deaminated glutathione amidase 0.81 IAI47_01860 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 76
Dickeya dianthicola 67-19 0.59 HGI48_RS19475 deaminated glutathione amidase 0.77 HGI48_RS19710 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 71
Erwinia tracheiphila SCR3 0.58 LU632_RS16420 deaminated glutathione amidase 0.79 LU632_RS22900 mrcA peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA — —
Rahnella sp. WP5 0.56 EX31_RS23065 deaminated glutathione amidase 0.80 EX31_RS04750 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA 0.47 74
Dickeya dadantii 3937 0.52 DDA3937_RS06130 deaminated glutathione amidase 0.78 DDA3937_RS19580 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 74
Dickeya dianthicola ME23 0.52 DZA65_RS06520 deaminated glutathione amidase 0.77 DZA65_RS20795 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 75
Pectobacterium carotovorum WPP14 0.51 HER17_RS17575 deaminated glutathione amidase 0.81 HER17_RS01745 peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA low > 75
Shewanella amazonensis SB2B 0.22 Sama_0473 carbon-nitrogen family hydrolase (RefSeq) 0.48 Sama_3374 penicillin-binding protein 1A (RefSeq) low > 62
Magnetospirillum magneticum AMB-1 0.21 AMB_RS08115 carbon-nitrogen hydrolase family protein 0.24 AMB_RS16340 penicillin-binding protein 1A low > 64
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS04335 carbon-nitrogen hydrolase family protein 0.35 PFLU_RS02000 penicillin-binding protein 1A low > 109
Pseudomonas fluorescens SBW25 0.21 PFLU_RS04335 carbon-nitrogen hydrolase family protein 0.35 PFLU_RS02000 penicillin-binding protein 1A low > 109
Shewanella oneidensis MR-1 0.21 SO4092 hydrolase, carbon-nitrogen family (NCBI ptt file) 0.48 SO0280 mrcA penicillin-binding protein 1A (NCBI ptt file) — —
Pseudomonas simiae WCS417 0.21 PS417_04280 carbon-nitrogen hydrolase 0.35 PS417_01955 peptidase 0.18 86
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_3281 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) 0.34 Pf6N2E2_3761 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) low > 103
Variovorax sp. OAS795 0.21 ABID97_RS02000 carbon-nitrogen hydrolase family protein 0.29 ABID97_RS02790 penicillin-binding protein 1A low > 91
Pseudomonas sp. S08-1 0.20 OH686_08585 Uncharacterized subgroup of the nitrilase superfamily 0.35 OH686_10055 Multimodular transpeptidase-transglycosylase low > 80
Pseudomonas fluorescens FW300-N2E3 0.20 AO353_05220 carbon-nitrogen hydrolase 0.36 AO353_12470 peptidase low > 101
Pseudomonas fluorescens GW456-L13 0.20 PfGW456L13_5027 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) 0.33 PfGW456L13_282 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) low > 87
Paraburkholderia graminis OAS925 0.20 ABIE53_000852 putative amidohydrolase 0.31 ABIE53_003746 penicillin-binding protein 1A low > 113
Pseudomonas fluorescens FW300-N1B4 0.20 Pf1N1B4_1093 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) 0.35 Pf1N1B4_1544 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) low > 87
Variovorax sp. SCN45 0.20 GFF5445 FIG003879: Uncharacterized subgroup of the nitrilase superfamily 0.29 GFF3310 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) low > 127
Pseudomonas fluorescens FW300-N2C3 0.20 AO356_07100 carbon-nitrogen hydrolase 0.35 AO356_09420 peptidase low > 104
Pseudomonas sp. RS175 0.20 PFR28_00160 Deaminated glutathione amidase 0.35 PFR28_05006 Penicillin-binding protein 1A low > 88
Shewanella loihica PV-4 0.20 Shew_0409 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) 0.46 Shew_0207 1A family penicillin-binding protein (RefSeq) — —
Paraburkholderia bryophila 376MFSha3.1 0.20 H281DRAFT_04689 nitrilase 0.31 H281DRAFT_05609 penicillin-binding protein 1A low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.20 Psyr_4157 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 0.35 Psyr_0402 Peptidoglycan glycosyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.20 Psyr_4157 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 0.35 Psyr_0402 Peptidoglycan glycosyltransferase low > 86
Paraburkholderia sabiae LMG 24235 0.19 QEN71_RS26550 carbon-nitrogen hydrolase family protein 0.30 QEN71_RS07180 penicillin-binding protein 1A low > 153
Pseudomonas stutzeri RCH2 0.19 Psest_3321 Predicted amidohydrolase 0.35 Psest_3720 penicillin-binding protein, 1A family low > 67
Burkholderia phytofirmans PsJN 0.19 BPHYT_RS03545 apolipoprotein acyltransferase 0.30 BPHYT_RS17915 penicillin-binding protein 1A — —
Herbaspirillum seropedicae SmR1 0.19 HSERO_RS07150 apolipoprotein acyltransferase 0.29 HSERO_RS20890 penicillin-binding protein 1A — —
Rhizobium sp. OAE497 0.19 ABIE40_RS17345 carbon-nitrogen hydrolase family protein 0.24 ABIE40_RS07555 penicillin-binding protein 1A — —
Cupriavidus basilensis FW507-4G11 0.19 RR42_RS05880 acyltransferase 0.30 RR42_RS19040 penicillin-binding protein — —
Sinorhizobium meliloti 1021 0.19 SMc02442 hydrolase 0.24 SMc01334 penicillin-binding 1A transmembrane protein — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.18 GFF2535 FIG003879: Predicted amidohydrolase 0.28 GFF1338 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) low > 90
Alteromonas macleodii MIT1002 0.18 MIT1002_00226 (R)-stereoselective amidase 0.45 MIT1002_00454 Penicillin-binding protein 1A low > 70
Azospirillum sp. SherDot2 0.17 MPMX19_02429 Deaminated glutathione amidase 0.26 MPMX19_00340 Penicillin-binding protein 1A — —
Brevundimonas sp. GW460-12-10-14-LB2 0.17 A4249_RS13565 carbon-nitrogen hydrolase family protein 0.22 A4249_RS04500 penicillin-binding protein 1A — —
Acinetobacter radioresistens SK82 0.16 MPMX26_00580 Deaminated glutathione amidase 0.32 MPMX26_02817 Penicillin-binding protein 1A low > 36
Kangiella aquimarina DSM 16071 0.15 B158DRAFT_1813 N-carbamoylputrescine amidase 0.38 B158DRAFT_0757 penicillin-binding protein, 1A family — —
Xanthomonas campestris pv. campestris strain 8004 0.12 Xcc-8004.2374.1 N-carbamoylputrescine amidase (3.5.1.53) / Aliphatic amidase AmiE (EC 3.5.1.4) 0.30 Xcc-8004.1196.1 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) — —
Lysobacter sp. OAE881 0.12 ABIE51_RS09320 carbon-nitrogen hydrolase 0.31 ABIE51_RS17190 penicillin-binding protein 1A — —
Bosea sp. OAE506 0.11 ABIE41_RS22010 N-carbamoyl-D-amino-acid hydrolase 0.24 ABIE41_RS16150 penicillin-binding protein 1A low > 77

Not shown: 8 genomes with orthologs for OKFHMN_07410 only; 28 genomes with orthologs for OKFHMN_17080 only