Conservation of cofitness between NOLOHH_06505 and NOLOHH_06705 in Escherichia coli ECOR27

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_06505 rarD EamA family transporter RarD 1.0 NOLOHH_06705 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.61 16
Escherichia coli ECRC62 1.00 BNILDI_05025 rarD EamA family transporter RarD 1.00 BNILDI_04820 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 75
Escherichia coli ECRC100 1.00 OKFHMN_14375 rarD EamA family transporter RarD 1.00 OKFHMN_14570 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 80
Escherichia coli ECRC102 1.00 NIAGMN_12130 rarD EamA family transporter RarD 1.00 NIAGMN_12325 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) — —
Escherichia coli ECRC99 1.00 KEDOAH_13775 rarD EamA family transporter RarD 1.00 KEDOAH_13580 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) — —
Escherichia coli ECRC98 1.00 JDDGAC_18000 rarD EamA family transporter RarD 1.00 JDDGAC_18195 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 86
Escherichia coli BW25113 0.99 b3819 rarD predicted chloramphenical resistance permease (NCBI) 0.99 b3786 rffE UDP-N-acetyl glucosamine-2-epimerase (NCBI) low > 76
Escherichia coli BL21 0.99 ECD_03698 putative chloramphenical resistance permease 1.00 ECD_03664 UDP-N-acetyl glucosamine-2-epimerase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_04232 Protein RarD 1.00 OHPLBJKB_04268 UDP-N-acetylglucosamine 2-epimerase low > 73
Escherichia fergusonii Becca 0.99 EFB2_04818 Protein RarD 1.00 EFB2_04853 UDP-N-acetylglucosamine 2-epimerase 0.60 61
Escherichia coli ECOR38 0.99 HEPCGN_13075 rarD EamA family transporter RarD 0.99 HEPCGN_13280 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 87
Escherichia coli ECRC101 0.99 MCAODC_04880 rarD EamA family transporter RarD 1.00 MCAODC_05075 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS21920 EamA family transporter RarD 1.00 ECOLIN_RS21735 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF245 Protein rarD 0.85 GFF2887 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) low > 78
Enterobacter asburiae PDN3 0.91 EX28DRAFT_4484 rarD protein 0.86 EX28DRAFT_4456 UDP-N-acetylglucosamine 2-epimerase low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_04461 Protein RarD 0.83 MPMX20_04487 UDP-N-acetylglucosamine 2-epimerase low > 85
Klebsiella michiganensis M5al 0.87 BWI76_RS01230 chloramphenicol resistance permease RarD 0.86 BWI76_RS01090 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 92
Serratia liquefaciens MT49 0.80 IAI46_00755 EamA family transporter RarD 0.78 IAI46_00600 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 86
Pectobacterium carotovorum WPP14 0.76 HER17_RS01380 EamA family transporter RarD 0.76 HER17_RS01155 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 75
Erwinia tracheiphila SCR3 0.74 LU632_RS24110 rarD EamA family transporter RarD 0.80 LU632_RS24240 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 74
Pantoea sp. MT58 0.73 IAI47_18375 EamA family transporter RarD 0.79 IAI47_18510 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 76
Rahnella sp. WP5 0.71 EX31_RS15195 EamA family transporter RarD 0.77 EX31_RS15065 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 89
Dickeya dadantii 3937 0.67 DDA3937_RS19865 EamA family transporter RarD 0.73 DDA3937_RS20055 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 74
Dickeya dianthicola ME23 0.65 DZA65_RS21060 EamA family transporter RarD 0.73 DZA65_RS21245 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 75
Dickeya dianthicola 67-19 0.65 HGI48_RS20020 EamA family transporter RarD 0.73 HGI48_RS20200 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 71
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_01040 protein RarD 0.68 CSW01_04705 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 62
Shewanella amazonensis SB2B 0.55 Sama_0332 rarD protein (RefSeq) 0.72 Sama_2261 UDP-N-acetylglucosamine 2-epimerase (RefSeq) — —
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_4754 Protein rarD 0.51 Pf6N2E2_201 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) low > 103
Pseudomonas sp. RS175 0.48 PFR28_04108 Protein RarD 0.66 PFR28_00916 UDP-N-acetylglucosamine 2-epimerase 0.23 81
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_1142 Protein rarD 0.65 PfGW456L13_3995 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) low > 87
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_14110 Putative D-serine transporter (from data) 0.51 AO356_00800 UDP-N-acetylglucosamine 2-epimerase low > 104
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_07550 chloramphenical resistance permease RarD 0.50 AO353_01990 UDP-N-acetylglucosamine 2-epimerase low > 101
Pseudomonas fluorescens SBW25 0.46 PFLU_RS27675 EamA family transporter RarD 0.16 PFLU_RS08155 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 109
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS27675 EamA family transporter RarD 0.16 PFLU_RS08155 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.26 7
Pseudomonas putida KT2440 0.46 PP_0358 conserved membrane protein of unknown function 0.66 PP_1811 UDP-N-acetylglucosamine-2-epimerase low > 96
Pseudomonas simiae WCS417 0.46 PS417_26030 chloramphenical resistance permease RarD 0.16 PS417_08175 UDP-N-acetylglucosamine 2-epimerase — —
Paraburkholderia sabiae LMG 24235 0.41 QEN71_RS26035 EamA family transporter RarD 0.63 QEN71_RS40740 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 153
Magnetospirillum magneticum AMB-1 0.41 AMB_RS06360 EamA family transporter RarD 0.20 AMB_RS00515 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) — —
Pseudomonas stutzeri RCH2 0.41 Psest_0356 rarD protein 0.59 Psest_0249 UDP-N-acetylglucosamine 2-epimerase low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_4698 RarD protein 0.53 Psyr_1032 UDP-N-Acetylglucosamine 2-epimerase low > 86
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_4698 RarD protein 0.53 Psyr_1032 UDP-N-Acetylglucosamine 2-epimerase low > 86
Marinobacter adhaerens HP15 0.39 HP15_2670 RarD protein, DMT superfamily transporter 0.65 HP15_2382 UDP-N-acetylglucosamine 2-epimerase low > 73
Pseudomonas sp. S08-1 0.38 OH686_10385 Uncharacterized inner membrane protein RarD 0.66 OH686_14385 UDP-N-acetylglucosamine 2-epimerase low > 80
Kangiella aquimarina DSM 16071 0.38 B158DRAFT_0490 rarD protein 0.66 B158DRAFT_2351 UDP-N-acetylglucosamine 2-epimerase low > 40
Ralstonia sp. UNC404CL21Col 0.37 ABZR87_RS08060 EamA family transporter RarD 0.65 ABZR87_RS21645 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 80
Sphingomonas koreensis DSMZ 15582 0.36 Ga0059261_3478 rarD protein 0.54 Ga0059261_3102 UDP-N-Acetylglucosamine 2-epimerase (EC 5.1.3.14) — —
Ralstonia solanacearum GMI1000 0.36 RS_RS02855 EamA family transporter RarD 0.63 RS_RS19610 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 80
Ralstonia solanacearum UW163 0.35 UW163_RS01440 EamA family transporter RarD 0.63 UW163_RS20040 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) — —
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS12170 EamA family transporter RarD 0.63 RALBFv3_RS19090 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 76
Ralstonia solanacearum PSI07 0.33 RPSI07_RS21160 EamA family transporter RarD 0.63 RPSI07_RS01940 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 81
Herbaspirillum seropedicae SmR1 0.33 HSERO_RS23555 membrane protein 0.20 HSERO_RS13765 UDP-N-acetylglucosamine 2-epimerase low > 78
Rhodospirillum rubrum S1H 0.31 Rru_A0706 RarD protein (NCBI) 0.41 Rru_A1493 UDP-N-acetylglucosamine 2-epimerase (NCBI) low > 58
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS34860 chemotaxis protein 0.50 BPHYT_RS21460 UDP-N-acetylglucosamine 2-epimerase low > 109
Acinetobacter radioresistens SK82 0.18 MPMX26_02140 Protein RarD 0.39 MPMX26_00920 UDP-N-acetylglucosamine 2-epimerase low > 36
Paraburkholderia graminis OAS925 0.16 ABIE53_004634 chloramphenicol-sensitive protein RarD 0.49 ABIE53_001712 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) — —
Pedobacter sp. GW460-11-11-14-LB5 0.11 CA265_RS22830 permease 0.22 CA265_RS19270 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 88

Not shown: 24 genomes with orthologs for NOLOHH_06505 only; 14 genomes with orthologs for NOLOHH_06705 only