Conservation of cofitness between MPMX19_06850 and MPMX19_04919 in Azospirillum sp. SherDot2

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Azospirillum sp. SherDot2 1.0 MPMX19_06850 putative tartrate dehydrogenase/decarboxylase TtuC' 1.0 MPMX19_04919 5-aminovalerate aminotransferase DavT 0.30 17
Sinorhizobium meliloti 1021 0.84 SMa1846 3-isopropylmalate dehydrogenase 0.57 SM_b21186 4-aminobutyrate aminotransferase low > 103
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_4412 Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) 0.55 Pf1N1B4_1733 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) low > 87
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS33755 tartrate dehydrogenase 0.63 RR42_RS21370 4-aminobutyrate aminotransferase low > 128
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS25050 3-isopropylmalate dehydrogenase 0.60 BPHYT_RS22435 4-aminobutyrate aminotransferase — —
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS37830 tartrate dehydrogenase 0.61 QEN71_RS19980 4-aminobutyrate--2-oxoglutarate transaminase low > 153
Ralstonia solanacearum GMI1000 0.49 RS_RS21930 tartrate dehydrogenase 0.59 RS_RS00145 4-aminobutyrate--2-oxoglutarate transaminase low > 80
Ralstonia solanacearum PSI07 0.49 RPSI07_RS04410 tartrate dehydrogenase 0.59 RPSI07_RS23805 4-aminobutyrate--2-oxoglutarate transaminase low > 81
Variovorax sp. OAS795 0.48 ABID97_RS29220 tartrate dehydrogenase 0.61 ABID97_RS21585 4-aminobutyrate--2-oxoglutarate transaminase — —
Variovorax sp. SCN45 0.48 GFF7170 D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) 0.60 GFF921 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF2675 Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) 0.59 GFF2029 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) low > 90
Ralstonia solanacearum UW163 0.48 UW163_RS18420 tartrate dehydrogenase 0.59 UW163_RS04035 4-aminobutyrate--2-oxoglutarate transaminase — —
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS17030 tartrate dehydrogenase 0.59 RALBFv3_RS09545 4-aminobutyrate--2-oxoglutarate transaminase low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_01933 D-malate dehydrogenase [decarboxylating] 0.57 OHPLBJKB_02380 4-aminobutyrate aminotransferase PuuE low > 74
Escherichia coli ECRC102 0.48 NIAGMN_01440 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.57 NIAGMN_26590 puuE 4-aminobutyrate transaminase low > 80
Escherichia coli BW25113 0.48 b1800 yeaU predicted dehydrogenase (NCBI) 0.57 b1302 puuE GABA aminotransferase, PLP-dependent (NCBI) low > 76
Escherichia coli ECRC100 0.48 OKFHMN_26625 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.57 OKFHMN_02420 puuE 4-aminobutyrate transaminase low > 79
Escherichia coli ECRC99 0.48 KEDOAH_01485 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.57 KEDOAH_26355 puuE 4-aminobutyrate transaminase — —
Escherichia coli ECRC98 0.48 JDDGAC_01200 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.57 JDDGAC_04965 puuE 4-aminobutyrate transaminase low > 87
Escherichia coli ECRC62 0.48 BNILDI_15930 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.57 BNILDI_18255 puuE 4-aminobutyrate transaminase low > 75
Escherichia coli ECRC101 0.48 MCAODC_18785 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.57 MCAODC_15850 puuE 4-aminobutyrate transaminase low > 88
Escherichia coli BL21 0.48 ECD_01770 D-malate oxidase, NAD-dependent; putative tartrate dehydrogenase 0.57 ECD_01279 4-aminobutyrate aminotransferase, PLP-dependent low > 61
Acidovorax sp. GW101-3H11 0.48 Ac3H11_635 Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) 0.59 Ac3H11_4179 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) low > 79
Escherichia coli ECOR38 0.48 HEPCGN_05015 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.57 HEPCGN_25780 puuE 4-aminobutyrate transaminase low > 88
Escherichia coli ECOR27 0.47 NOLOHH_17145 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.57 NOLOHH_20105 puuE 4-aminobutyrate transaminase low > 76
Paraburkholderia graminis OAS925 0.47 ABIE53_005150 tartrate dehydrogenase/decarboxylase/D-malate dehydrogenase 0.60 ABIE53_004117 4-aminobutyrate aminotransferase low > 113
Klebsiella pneumoniae MKP103 0.47 KDGMDA_18320 tartrate dehydrogenase 0.58 KDGMDA_07235 4-aminobutyrate--2-oxoglutarate transaminase low > 95
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_01534 tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase 0.60 H281DRAFT_03179 4-aminobutyrate aminotransferase apoenzyme low > 103
Klebsiella michiganensis M5al 0.47 BWI76_RS10680 tartrate dehydrogenase 0.60 BWI76_RS26375 aspartate aminotransferase family protein low > 92
Acinetobacter baumannii LAC-4 0.47 RR41_RS15025 tartrate dehydrogenase 0.52 RR41_RS01110 4-aminobutyrate--2-oxoglutarate transaminase low > 55
Castellaniella sp019104865 MT123 0.46 ABCV34_RS14695 tartrate dehydrogenase 0.57 ABCV34_RS01765 4-aminobutyrate--2-oxoglutarate transaminase low > 48
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS07390 tartrate dehydrogenase 0.61 HSERO_RS05420 4-aminobutyrate aminotransferase low > 78
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_369 Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) 0.55 Pf6N2E2_4013 5-aminovalerate transaminase (EC 2.6.1.48) (from data) low > 103
Pseudomonas sp. BP01 0.46 JOY50_RS08040 tartrate dehydrogenase 0.57 JOY50_RS18510 gabT 4-aminobutyrate--2-oxoglutarate transaminase low > 84
Serratia liquefaciens MT49 0.46 IAI46_21025 tartrate dehydrogenase 0.57 IAI46_22165 4-aminobutyrate--2-oxoglutarate transaminase low > 86
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_28225 tartrate dehydrogenase 0.55 AO353_11510 5-aminovalerate transaminase (EC 2.6.1.48) (from data) low > 101
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_2396 Tartrate dehydrogenase 0.53 Psyr_0090 4-aminobutyrate aminotransferase apoenzyme low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_2396 Tartrate dehydrogenase 0.53 Psyr_0090 4-aminobutyrate aminotransferase apoenzyme low > 86
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_26735 tartrate dehydrogenase 0.55 AO356_10715 4-aminobutyrate aminotransferase low > 104
Pseudomonas lactucae CFBP13502 0.45 GEMAOFIL_03842 D-malate dehydrogenase [decarboxylating] 0.56 GEMAOFIL_00404 5-aminovalerate aminotransferase DavT low > 93
Pseudomonas fluorescens SBW25 0.45 PFLU_RS19735 tartrate dehydrogenase 0.56 PFLU_RS00915 4-aminobutyrate--2-oxoglutarate transaminase low > 109
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS19735 tartrate dehydrogenase 0.56 PFLU_RS00915 4-aminobutyrate--2-oxoglutarate transaminase low > 109
Pantoea agglomerans CFBP13505 P0401 0.45 PagCFBP13505_RS09590 tartrate dehydrogenase 0.52 PagCFBP13505_RS07790 4-aminobutyrate--2-oxoglutarate transaminase low > 74
Pantoea sp. MT58 0.45 IAI47_17525 tartrate dehydrogenase 0.52 IAI47_19475 4-aminobutyrate--2-oxoglutarate transaminase low > 76
Rhodopseudomonas palustris CGA009 0.44 TX73_008960 tartrate dehydrogenase 0.56 TX73_012015 4-aminobutyrate--2-oxoglutarate transaminase low > 86
Dickeya dadantii 3937 0.44 DDA3937_RS04645 tartrate dehydrogenase 0.55 DDA3937_RS11830 4-aminobutyrate--2-oxoglutarate transaminase low > 74
Dickeya dianthicola ME23 0.44 DZA65_RS04525 tartrate dehydrogenase 0.55 DZA65_RS12405 4-aminobutyrate--2-oxoglutarate transaminase low > 75
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS21505 tartrate dehydrogenase 0.60 ABZR87_RS05190 4-aminobutyrate--2-oxoglutarate transaminase low > 80
Dickeya dianthicola 67-19 0.43 HGI48_RS04605 tartrate dehydrogenase 0.55 HGI48_RS11860 4-aminobutyrate--2-oxoglutarate transaminase low > 71
Marinobacter adhaerens HP15 0.37 HP15_817 3-isopropylmalate dehydrogenase 0.53 HP15_3708 4-aminobutyrate aminotransferase low > 73
Mycobacterium tuberculosis H37Rv 0.35 Rv2995c Probable 3-isopropylmalate dehydrogenase LeuB (beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) 0.42 Rv2589 4-aminobutyrate aminotransferase GabT (gamma-amino-N-butyrate transaminase) (GABA transaminase) (glutamate:succinic semialdehyde transaminase) (GABA aminotransferase) (GABA-at) — —
Rhizobium sp. OAE497 0.24 ABIE40_RS23195 isocitrate/isopropylmalate family dehydrogenase 0.57 ABIE40_RS00145 4-aminobutyrate--2-oxoglutarate transaminase low > 107

Not shown: 9 genomes with orthologs for MPMX19_06850 only; 30 genomes with orthologs for MPMX19_04919 only