Conservation of cofitness between MPMX19_01820 and MPMX19_04417 in Azospirillum sp. SherDot2

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Azospirillum sp. SherDot2 1.0 MPMX19_01820 Inner membrane protein YohK 1.0 MPMX19_04417 Dipeptide transport system permease protein DppC 0.60 2
Azospirillum brasilense Sp245 0.85 AZOBR_RS12150 membrane protein 0.82 AZOBR_RS21770 peptide ABC transporter low > 97
Paraburkholderia bryophila 376MFSha3.1 0.53 H281DRAFT_02851 TIGR00659 family protein 0.57 H281DRAFT_05804 dipeptide transport system permease protein — —
Rhodospirillum rubrum S1H 0.53 Rru_A2427 LrgB-like protein (NCBI) 0.62 Rru_A2358 Binding-protein-dependent transport systems inner membrane component (NCBI) low > 58
Variovorax sp. OAS795 0.52 ABID97_RS17375 LrgB family protein 0.61 ABID97_RS04455 ABC transporter permease subunit low > 91
Paraburkholderia graminis OAS925 0.52 ABIE53_005942 putative murein hydrolase (TIGR00659 family) 0.57 ABIE53_000056 dipeptide transport system permease protein low > 113
Variovorax sp. SCN45 0.51 GFF436 LrgA-associated membrane protein LrgB 0.62 GFF7285 Dipeptide ABC transporter, permease protein DppC (TC 3.A.1.5.2) low > 127
Marinobacter adhaerens HP15 0.51 HP15_2943 LrgB family protein 0.33 HP15_2805 permease protein, ABC-type oligopeptide transporter low > 73
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS26565 membrane protein 0.57 BPHYT_RS18680 peptide ABC transporter — —
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_15270 hypothetical protein 0.61 AO356_07265 peptide transporter low > 104
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_4989 LrgA-associated membrane protein LrgB 0.61 Pf6N2E2_3312 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) low > 103
Pseudomonas putida KT2440 0.38 PP_4815 putative Membrane protein 0.60 PP_0880 dipeptide ABC transporter - putative membrane subunit low > 96
Pseudomonas sp. RS175 0.38 PFR28_03876 Inner membrane protein YohK 0.61 PFR28_00126 Dipeptide transport system permease protein DppC low > 88
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_1351 LrgA-associated membrane protein LrgB 0.61 PfGW456L13_5056 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) low > 87
Pseudomonas sp. DMC3 0.38 GFF3867 Inner membrane protein YohK 0.61 GFF5021 Dipeptide transport system permease protein DppC low > 89
Pseudomonas sp. BP01 0.38 JOY50_RS17660 LrgB family protein 0.60 JOY50_RS10955 ABC transporter permease subunit low > 84
Pseudomonas aeruginosa PA14 0.37 IKLFDK_20695 LrgB-like family 0.60 IKLFDK_01560 Di/tripeptide transport system permease protein DppC low > 100
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_06515 hypothetical protein 0.60 AO353_05400 peptide transporter low > 101
Pseudomonas simiae WCS417 0.37 PS417_24765 membrane protein 0.61 PS417_04055 peptide transporter low > 88
Pseudomonas sp. S08-1 0.37 OH686_09360 LrgA-associated membrane protein LrgB 0.60 OH686_08710 Dipeptide ABC transporter, permease protein DppC low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_0637 LrgB-like protein 0.60 Psyr_4240 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_0637 LrgB-like protein 0.60 Psyr_4240 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas lactucae CFBP13502 0.37 GEMAOFIL_05107 Inner membrane protein YohK 0.61 GEMAOFIL_01015 Dipeptide transport system permease protein DppC low > 93
Pseudomonas fluorescens SBW25 0.36 PFLU_RS26700 LrgB family protein 0.61 PFLU_RS04095 ABC transporter permease subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS26700 LrgB family protein 0.61 PFLU_RS04095 ABC transporter permease subunit low > 109
Pseudomonas segetis P6 0.36 MPMX49_01042 Inner membrane protein YohK 0.62 MPMX49_03888 Dipeptide transport system permease protein DppC low > 75
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_2683 LrgA-associated membrane protein LrgB 0.61 Pf1N1B4_1125 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) low > 87
Pseudomonas sp. SVBP6 0.35 COO64_RS15650 LrgB family protein 0.62 COO64_RS04095 ABC transporter permease subunit low > 93
Klebsiella pneumoniae MKP103 0.35 KDGMDA_26585 CidB/LrgB family autolysis modulator 0.59 KDGMDA_07600 dipeptide ABC transporter permease DppC low > 95
Alteromonas macleodii MIT1002 0.34 MIT1002_00933 Inner membrane protein YohK 0.35 MIT1002_01139 Peptide transport system permease protein SapC — —
Escherichia coli BW25113 0.34 b2142 yohK predicted inner membrane protein (NCBI) 0.59 b3542 dppC dipeptide transporter (NCBI) low > 76
Escherichia coli ECRC100 0.34 OKFHMN_23575 yohK CidB/LrgB family autolysis modulator 0.59 OKFHMN_16110 dppC dipeptide ABC transporter permease DppC low > 79
Escherichia coli HS(pFamp)R (ATCC 700891) 0.34 OHPLBJKB_01569 Inner membrane protein YohK 0.59 OHPLBJKB_00164 Dipeptide transport system permease protein DppC low > 74
Escherichia coli ECRC62 0.34 BNILDI_14065 yohK CidB/LrgB family autolysis modulator 0.59 BNILDI_03505 dppC dipeptide ABC transporter permease DppC low > 75
Escherichia coli ECOR38 0.34 HEPCGN_22840 yohK CidB/LrgB family autolysis modulator 0.59 HEPCGN_14975 dppC dipeptide ABC transporter permease DppC low > 88
Escherichia coli ECRC99 0.34 KEDOAH_04610 yohK CidB/LrgB family autolysis modulator 0.59 KEDOAH_12040 dppC dipeptide ABC transporter permease DppC — —
Escherichia fergusonii Becca 0.34 EFB2_01714 Inner membrane protein YohK 0.59 EFB2_00265 Dipeptide transport system permease protein DppC low > 86
Escherichia coli ECRC101 0.34 MCAODC_14625 yohK CidB/LrgB family autolysis modulator 0.59 MCAODC_06625 dppC dipeptide ABC transporter permease DppC low > 88
Escherichia coli ECRC98 0.34 JDDGAC_27530 yohK CidB/LrgB family autolysis modulator 0.59 JDDGAC_19740 dppC dipeptide ABC transporter permease DppC low > 87
Escherichia coli ECRC102 0.34 NIAGMN_21340 yohK CidB/LrgB family autolysis modulator 0.59 NIAGMN_13870 dppC dipeptide ABC transporter permease DppC low > 80
Escherichia coli ECOR27 0.34 NOLOHH_15145 yohK CidB/LrgB family autolysis modulator 0.59 NOLOHH_08055 dppC dipeptide ABC transporter permease DppC low > 76
Escherichia coli BL21 0.34 ECD_02071 LrgB family inner membrane protein 0.59 ECD_03393 dipeptide/heme ABC transporter permease low > 61
Klebsiella michiganensis M5al 0.33 BWI76_RS19605 CidB/LrgB family autolysis modulator 0.61 BWI76_RS26875 dipeptide ABC transporter permease DppC low > 92
Escherichia coli Nissle 1917 0.33 ECOLIN_RS12540 CidB/LrgB family autolysis modulator 0.59 ECOLIN_RS20265 dipeptide ABC transporter permease DppC low > 55
Enterobacter sp. TBS_079 0.32 MPMX20_03114 Inner membrane protein YohK 0.61 MPMX20_00192 Dipeptide transport system permease protein DppC low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.32 GFF3796 LrgA-associated membrane protein LrgB 0.62 GFF477 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) low > 78
Enterobacter asburiae PDN3 0.32 EX28DRAFT_0413 TIGR00659 family protein 0.60 EX28DRAFT_3802 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components low > 76
Dickeya dianthicola ME23 0.31 DZA65_RS08945 CidB/LrgB family autolysis modulator 0.64 DZA65_RS21910 dipeptide ABC transporter permease DppC low > 75
Rahnella sp. WP5 0.31 EX31_RS11260 CidB/LrgB family autolysis modulator 0.60 EX31_RS05505 dipeptide ABC transporter permease DppC low > 89
Dickeya dianthicola 67-19 0.31 HGI48_RS08655 CidB/LrgB family autolysis modulator 0.64 HGI48_RS20915 dipeptide ABC transporter permease DppC low > 71
Dickeya dadantii 3937 0.31 DDA3937_RS08490 CidB/LrgB family autolysis modulator 0.65 DDA3937_RS00470 dipeptide ABC transporter permease DppC low > 74
Pectobacterium carotovorum WPP14 0.31 HER17_RS13480 CidB/LrgB family autolysis modulator 0.64 HER17_RS00230 dipeptide ABC transporter permease DppC low > 75
Erwinia amylovora T8 0.30 OLJFJH_11880 Inner membrane protein yohK 0.60 OLJFJH_04865 dipeptide ABC transporter permease DppC low > 58
Pantoea agglomerans CFBP13505 P0401 0.29 PagCFBP13505_RS00865 CidB/LrgB family autolysis modulator 0.61 PagCFBP13505_RS15675 dipeptide ABC transporter permease DppC low > 74
Serratia liquefaciens MT49 0.29 IAI46_07945 CidB/LrgB family autolysis modulator 0.62 IAI46_00485 dipeptide ABC transporter permease DppC low > 86
Pantoea sp. MT58 0.29 IAI47_06765 CidB/LrgB family autolysis modulator 0.60 IAI47_18640 dipeptide ABC transporter permease DppC low > 76
Vibrio cholerae E7946 ATCC 55056 0.26 CSW01_06230 LrgB family protein 0.36 CSW01_08455 peptide ABC transporter permease SapC — —
Paraburkholderia sabiae LMG 24235 0.22 QEN71_RS28735 LrgB family protein 0.57 QEN71_RS28695 ABC transporter permease subunit low > 153
Shewanella loihica PV-4 0.20 Shew_0830 LrgB family protein (RefSeq) 0.41 Shew_2500 binding-protein-dependent transport systems inner membrane component (RefSeq) — —
Shewanella sp. ANA-3 0.14 Shewana3_0886 LrgB family protein (RefSeq) 0.41 Shewana3_2652 binding-protein-dependent transport systems inner membrane component (RefSeq) — —
Shewanella oneidensis MR-1 0.14 SO1048 membrane protein, putative (NCBI ptt file) 0.40 SO1803 sapC peptide ABC transporter, permease protein (NCBI ptt file) low > 76

Not shown: 24 genomes with orthologs for MPMX19_01820 only; 10 genomes with orthologs for MPMX19_04417 only