Conservation of cofitness between JDDGAC_25065 and JDDGAC_26995 in Escherichia coli ECRC98

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_25065 lepA translation elongation factor 4 1.0 JDDGAC_26995 MFS transporter 0.66 16
Escherichia coli ECRC62 1.00 BNILDI_11875 lepA translation elongation factor 4 0.26 BNILDI_07855 hpaX 4-hydroxyphenylacetate permease low > 75
Escherichia coli ECOR27 1.00 NOLOHH_13075 lepA translation elongation factor 4 0.26 NOLOHH_03745 hpaX 4-hydroxyphenylacetate permease low > 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS14540 translation elongation factor 4 0.99 ECOLIN_RS13090 MFS transporter low > 55
Escherichia coli BW25113 1.00 b2569 lepA GTP-binding protein LepA (NCBI) 0.99 b2246 b2246 putative transport protein (VIMSS) low > 76
Escherichia coli ECRC102 1.00 NIAGMN_19170 lepA translation elongation factor 4 1.00 NIAGMN_20800 MFS transporter — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01138 Elongation factor 4 1.00 OHPLBJKB_01465 Inner membrane transport protein RhmT low > 73
Escherichia coli ECOR38 1.00 HEPCGN_20545 lepA translation elongation factor 4 0.99 HEPCGN_22275 MFS transporter low > 87
Escherichia coli BL21 1.00 ECD_02463 back-translocating elongation factor EF4, GTPase 0.99 ECD_02172 putative L-rhamnonate transporter low > 61
Escherichia fergusonii Becca 1.00 EFB2_01327 Elongation factor 4 0.99 EFB2_01610 Inner membrane transport protein RhmT low > 86
Klebsiella michiganensis M5al 0.94 BWI76_RS21335 elongation factor 4 0.90 BWI76_RS19985 MFS transporter — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF2477 Translation elongation factor LepA 0.93 GFF1851 L-rhamnonate transporter (predicted by genome context) low > 78
Enterobacter asburiae PDN3 0.94 EX28DRAFT_0076 elongation factor 4 0.25 EX28DRAFT_3541 4-hydroxyphenylacetate permease low > 76
Enterobacter sp. TBS_079 0.93 MPMX20_03440 Elongation factor 4 0.25 MPMX20_00636 Putative tartrate transporter low > 85
Dickeya dadantii 3937 0.92 DDA3937_RS15745 elongation factor 4 0.26 DDA3937_RS14150 MFS transporter low > 74
Dickeya dianthicola 67-19 0.92 HGI48_RS15830 elongation factor 4 0.27 HGI48_RS20685 MFS transporter low > 71
Dickeya dianthicola ME23 0.92 DZA65_RS16910 elongation factor 4 0.25 DZA65_RS14810 MFS transporter low > 75
Erwinia tracheiphila SCR3 0.92 LU632_RS15395 lepA translation elongation factor 4 0.19 LU632_RS04260 MFS transporter low > 74
Pectobacterium carotovorum WPP14 0.92 HER17_RS05805 translation elongation factor 4 0.28 HER17_RS17310 MFS transporter low > 75
Serratia liquefaciens MT49 0.91 IAI46_19560 elongation factor 4 0.53 IAI46_09090 MFS transporter low > 86
Rahnella sp. WP5 0.91 EX31_RS21825 elongation factor 4 0.31 EX31_RS20665 MFS transporter low > 89
Pantoea sp. MT58 0.89 IAI47_04870 elongation factor 4 0.28 IAI47_10485 MFS transporter low > 76
Pseudomonas sp. RS175 0.76 PFR28_03525 Elongation factor 4 0.32 PFR28_01580 Quinolone resistance transporter — —
Pseudomonas putida KT2440 0.76 PP_1431 Elongation factor 4 0.31 PP_4758 Major facilitator family transporter — —
Pseudomonas fluorescens SBW25 0.75 PFLU_RS05250 elongation factor 4 0.32 PFLU_RS11630 MFS transporter low > 109
Pseudomonas fluorescens FW300-N2E2 0.75 Pf6N2E2_5423 Translation elongation factor LepA 0.43 Pf6N2E2_1105 Nitrate/nitrite transporter — —
Pseudomonas fluorescens GW456-L13 0.75 PfGW456L13_4842 Translation elongation factor LepA 0.46 PfGW456L13_3929 Nitrate/nitrite transporter low > 87
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS05250 elongation factor 4 0.32 PFLU_RS11630 MFS transporter low > 109
Pseudomonas fluorescens FW300-N2C3 0.75 AO356_17485 elongation factor 4 0.45 AO356_26160 MFS transporter low > 104
Pseudomonas simiae WCS417 0.75 PS417_05180 elongation factor 4 0.31 PS417_17855 major facilitator transporter — —
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_04520 elongation factor 4 0.30 AO353_24515 MFS transporter permease low > 101
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_895 Translation elongation factor LepA 0.45 Pf1N1B4_5692 Nitrate/nitrite transporter — —
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_3954 GTP-binding protein LepA 0.32 Psyr_1709 Major facilitator superfamily low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_3954 GTP-binding protein LepA 0.32 Psyr_1709 Major facilitator superfamily low > 86
Herbaspirillum seropedicae SmR1 0.73 HSERO_RS09650 elongation factor 4 0.33 HSERO_RS11250 MFS transporter low > 78
Burkholderia phytofirmans PsJN 0.73 BPHYT_RS14380 elongation factor 4 0.48 BPHYT_RS28245 MFS transporter low > 109
Paraburkholderia bryophila 376MFSha3.1 0.72 H281DRAFT_04360 GTP-binding protein LepA 0.47 H281DRAFT_01229 Sugar phosphate permease low > 103
Paraburkholderia graminis OAS925 0.72 ABIE53_003038 GTP-binding protein LepA 0.47 ABIE53_005691 MFS family permease low > 113
Cupriavidus basilensis FW507-4G11 0.71 RR42_RS14055 elongation factor 4 0.30 RR42_RS25070 membrane protein low > 128
Paraburkholderia sabiae LMG 24235 0.70 QEN71_RS04600 translation elongation factor 4 0.45 QEN71_RS12645 MFS transporter low > 153
Dyella japonica UNC79MFTsu3.2 0.70 ABZR86_RS07165 translation elongation factor 4 0.28 ABZR86_RS11930 MFS transporter low > 74
Ralstonia solanacearum PSI07 0.70 RPSI07_RS18990 elongation factor 4 0.30 RPSI07_RS13130 MFS transporter low > 81
Ralstonia sp. UNC404CL21Col 0.69 ABZR87_RS10190 translation elongation factor 4 0.30 ABZR87_RS05260 MFS transporter low > 80
Xanthomonas campestris pv. campestris strain 8004 0.69 Xcc-8004.3676.1 Translation elongation factor LepA 0.26 Xcc-8004.5388.1 D-glycerate transporter (predicted) low > 74
Variovorax sp. SCN45 0.68 GFF3867 Translation elongation factor LepA 0.31 GFF6545 Uncharacterized MFS-type transporter low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.68 GFF3343 Translation elongation factor LepA 0.28 GFF4428 Nitrate/nitrite transporter low > 90
Variovorax sp. OAS795 0.68 ABID97_RS08350 translation elongation factor 4 0.31 ABID97_RS01950 MFS transporter low > 91
Ralstonia solanacearum UW163 0.68 UW163_RS11935 elongation factor 4 0.29 UW163_RS09450 MFS transporter — —
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS14470 elongation factor 4 0.29 RALBFv3_RS04220 MFS transporter low > 76
Ralstonia solanacearum GMI1000 0.68 RS_RS05250 elongation factor 4 0.30 RS_RS11810 MFS transporter — —
Magnetospirillum magneticum AMB-1 0.63 AMB_RS19545 elongation factor 4 0.29 AMB_RS16025 MFS transporter low > 64
Agrobacterium fabrum C58 0.61 Atu0241 GTP-binding protein LepA 0.31 Atu2708 MFS permease — —
Caulobacter crescentus NA1000 Δfur 0.60 CCNA_01086 GTP-binding protein lepA 0.30 CCNA_02439 transporter, major facilitator superfamily low > 67
Caulobacter crescentus NA1000 0.60 CCNA_01086 GTP-binding protein lepA 0.30 CCNA_02439 transporter, major facilitator superfamily low > 66
Rhizobium sp. OAE497 0.60 ABIE40_RS01055 translation elongation factor 4 0.31 ABIE40_RS20120 MFS transporter low > 107
Mycobacterium tuberculosis H37Rv 0.53 Rv2404c Probable GTP-binding protein LepA (GTP-binding elongation factor) 0.20 Rv1672c Probable conserved integral membrane transport protein low > 58

Not shown: 46 genomes with orthologs for JDDGAC_25065 only; 0 genomes with orthologs for JDDGAC_26995 only