Conservation of cofitness between HSERO_RS14075 and HSERO_RS23345 in Herbaspirillum seropedicae SmR1

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS14075 3-oxoacyl-ACP reductase 1.0 HSERO_RS23345 16S rRNA methyltransferase 0.34 15
Magnetospirillum magneticum AMB-1 0.73 AMB_RS14310 KR domain-containing protein 0.35 AMB_RS22780 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 64
Azospirillum sp. SherDot2 0.73 MPMX19_01299 Gluconate 5-dehydrogenase 0.33 MPMX19_02471 Ribosomal RNA small subunit methyltransferase I — —
Azospirillum brasilense Sp245 0.73 AZOBR_RS16265 3-oxoacyl-ACP reductase 0.33 AZOBR_RS02155 16S rRNA methyltransferase — —
Rhodopseudomonas palustris CGA009 0.70 TX73_008650 SDR family oxidoreductase 0.33 TX73_001680 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 86
Xanthomonas campestris pv. campestris strain 8004 0.68 Xcc-8004.500.1 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) 0.39 Xcc-8004.4371.1 rRNA small subunit methyltransferase I low > 74
Paraburkholderia sabiae LMG 24235 0.67 QEN71_RS24385 SDR family oxidoreductase 0.55 QEN71_RS00655 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Paraburkholderia graminis OAS925 0.67 ABIE53_001548 3-oxoacyl-[acyl-carrier protein] reductase 0.47 ABIE53_000470 16S rRNA (cytidine1402-2'-O)-methyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_04524 3-oxoacyl-[acyl-carrier protein] reductase 0.50 H281DRAFT_02152 16S rRNA (cytidine1402-2'-O)-methyltransferase — —
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS06420 oxidoreductase 0.53 BPHYT_RS01940 16S rRNA methyltransferase — —
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS04765 3-oxoacyl-ACP reductase 0.47 RR42_RS19740 16S rRNA methyltransferase low > 128
Ralstonia solanacearum GMI1000 0.65 RS_RS10970 KR domain-containing protein 0.48 RS_RS16360 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Ralstonia solanacearum PSI07 0.64 RPSI07_RS13705 3-oxoacyl-ACP reductase 0.49 RPSI07_RS08730 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 81
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS15380 SDR family oxidoreductase 0.48 ABZR87_RS03815 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 80
Ralstonia solanacearum IBSBF1503 0.62 RALBFv3_RS03520 3-oxoacyl-ACP reductase 0.49 RALBFv3_RS08495 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 76
Ralstonia solanacearum UW163 0.62 UW163_RS10150 3-oxoacyl-ACP reductase 0.49 UW163_RS05115 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Variovorax sp. SCN45 0.62 GFF6068 Oxidoreductase, short-chain dehydrogenase/reductase family 0.42 GFF3735 16S rRNA (cytidine(1402)-2'-O)-methyltransferase (EC 2.1.1.198) — —
Variovorax sp. OAS795 0.61 ABID97_RS22670 SDR family oxidoreductase 0.42 ABID97_RS00285 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF753 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) 0.36 GFF2715 rRNA small subunit methyltransferase I — —
Acidovorax sp. GW101-3H11 0.60 Ac3H11_1727 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) 0.42 Ac3H11_4466 rRNA small subunit methyltransferase I — —
Pseudomonas putida KT2440 0.59 PP_2540 Oxidoreductase, short-chain dehydrogenase/reductase family 0.42 PP_1326 16S rRNA 2'-O-ribose C1402 methyltransferase low > 96
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_2345 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) 0.43 PfGW456L13_1643 rRNA small subunit methyltransferase I low > 87
Dickeya dianthicola 67-19 0.56 HGI48_RS11805 SDR family oxidoreductase 0.42 HGI48_RS01610 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 71
Dickeya dianthicola ME23 0.55 DZA65_RS12345 SDR family oxidoreductase 0.42 DZA65_RS01685 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 75
Phaeobacter inhibens DSM 17395 0.54 PGA1_c10650 putative short chain dehydrogenase 0.23 PGA1_c26730 probable S-adenosylmethionine-dependent methyltransferase, YraL family low > 62
Dinoroseobacter shibae DFL-12 0.52 Dshi_1339 short-chain dehydrogenase/reductase SDR (RefSeq) 0.30 Dshi_2831 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase (RefSeq) low > 64
Bosea sp. OAE506 0.52 ABIE41_RS13185 SDR family oxidoreductase 0.30 ABIE41_RS03315 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Serratia liquefaciens MT49 0.48 IAI46_12450 SDR family oxidoreductase 0.40 IAI46_22295 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 86
Kangiella aquimarina DSM 16071 0.32 B158DRAFT_0024 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 0.37 B158DRAFT_2109 probable S-adenosylmethionine-dependent methyltransferase, YraL family low > 40
Sinorhizobium meliloti 1021 0.29 SMc01157 oxidoreductase 0.36 SMc00416 hypothetical protein — —
Rhizobium sp. OAE497 0.29 ABIE40_RS05770 SDR family oxidoreductase 0.35 ABIE40_RS01370 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 107
Klebsiella michiganensis M5al 0.26 BWI76_RS10295 short chain dehydrogenase/reductase family oxidoreductase 0.39 BWI76_RS24910 rRNA (cytidine-2'-O-)-methyltransferase low > 92
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_30325 3-oxoacyl-ACP reductase 0.44 AO356_17110 methyltransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_1928 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) 0.45 Pf6N2E2_5346 rRNA small subunit methyltransferase I low > 103
Agrobacterium fabrum C58 0.26 Atu0990 NAD/NADP dependent oxidoreductase 0.36 Atu0302 tetrapyrrole methylase family protein low > 89
Rhodanobacter denitrificans MT42 0.26 LRK55_RS02325 SDR family oxidoreductase 0.37 LRK55_RS11925 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 63
Rhodanobacter denitrificans FW104-10B01 0.26 LRK54_RS02570 SDR family oxidoreductase 0.37 LRK54_RS12190 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 59
Rahnella sp. WP5 0.25 EX31_RS17475 SDR family oxidoreductase 0.44 EX31_RS12550 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 89
Dyella japonica UNC79MFTsu3.2 0.25 ABZR86_RS08895 SDR family oxidoreductase 0.38 ABZR86_RS11380 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 74
Rhodanobacter sp. FW510-T8 0.24 OKGIIK_09625 fabG NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 0.35 OKGIIK_11735 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 52
Lysobacter sp. OAE881 0.23 ABIE51_RS12650 SDR family oxidoreductase 0.40 ABIE51_RS04695 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —

Not shown: 2 genomes with orthologs for HSERO_RS14075 only; 47 genomes with orthologs for HSERO_RS23345 only