Conservation of cofitness between HSERO_RS03410 and HSERO_RS18540 in Herbaspirillum seropedicae SmR1

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS03410 polyisoprenoid-binding protein 1.0 HSERO_RS18540 3-ketoacyl-ACP reductase 0.25 11
Ralstonia sp. UNC404CL21Col 0.66 ABZR87_RS01300 YceI family protein 0.61 ABZR87_RS22225 3-ketoacyl-ACP reductase FabG2 low > 80
Ralstonia solanacearum PSI07 0.65 RPSI07_RS11595 polyisoprenoid-binding protein 0.43 RPSI07_RS21885 3-oxoacyl-ACP reductase FabG low > 81
Burkholderia phytofirmans PsJN 0.65 BPHYT_RS03435 polyisoprenoid-binding protein 0.62 BPHYT_RS15135 3-ketoacyl-ACP reductase low > 109
Paraburkholderia graminis OAS925 0.64 ABIE53_000826 polyisoprenoid-binding protein YceI 0.62 ABIE53_003199 3-oxoacyl-[acyl-carrier protein] reductase low > 113
Ralstonia solanacearum UW163 0.64 UW163_RS07920 polyisoprenoid-binding protein 0.42 UW163_RS02260 3-oxoacyl-ACP reductase FabG — —
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS05705 polyisoprenoid-binding protein 0.42 RALBFv3_RS11325 3-oxoacyl-ACP reductase FabG low > 76
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS26665 YceI family protein 0.62 QEN71_RS03865 3-ketoacyl-ACP reductase FabG2 low > 153
Ralstonia solanacearum GMI1000 0.64 RS_RS13595 polyisoprenoid-binding protein 0.60 RS_RS18880 3-oxoacyl-ACP reductase FabG low > 80
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_04665 Polyisoprenoid-binding protein YceI 0.61 H281DRAFT_03972 3-oxoacyl-[acyl-carrier protein] reductase low > 103
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS17440 polyisoprenoid-binding protein 0.73 RR42_RS31190 3-ketoacyl-ACP reductase low > 128
Rhodanobacter denitrificans MT42 0.54 LRK55_RS05075 YceI family protein 0.37 LRK55_RS09420 3-oxoacyl-ACP reductase FabG low > 63
Rhodanobacter denitrificans FW104-10B01 0.54 LRK54_RS05295 YceI family protein 0.37 LRK54_RS09760 3-oxoacyl-ACP reductase FabG low > 59
Variovorax sp. OAS795 0.42 ABID97_RS04790 YceI family protein 0.39 ABID97_RS16765 3-oxoacyl-ACP reductase FabG low > 91
Variovorax sp. SCN45 0.40 GFF6286 Probable signal peptide protein 0.39 GFF308 Oxidoreductase, short-chain dehydrogenase/reductase family low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.38 GFF95 Probable signal peptide protein 0.39 GFF3012 3-oxoacyl-[ACP] reductase (EC 1.1.1.100) low > 90
Castellaniella sp019104865 MT123 0.36 ABCV34_RS08175 YceI family protein 0.57 ABCV34_RS14960 3-ketoacyl-ACP reductase FabG2 low > 48
Azospirillum sp. SherDot2 0.30 MPMX19_03035 Protein YceI 0.40 MPMX19_03667 3-oxoacyl-[acyl-carrier-protein] reductase FabG low > 112
Azospirillum brasilense Sp245 0.28 AZOBR_RS24000 polyprenyl-pyrophosphate binding protein 0.60 AZOBR_RS04695 3-ketoacyl-ACP reductase low > 97
Kangiella aquimarina DSM 16071 0.24 B158DRAFT_0439 Uncharacterized conserved protein 0.67 B158DRAFT_0420 3-oxoacyl-(acyl-carrier-protein) reductase, putative low > 40
Rhodanobacter sp. FW510-T8 0.23 OKGIIK_16900 yceI polyisoprenoid-binding protein 0.37 OKGIIK_16030 fabG 3-oxoacyl-ACP reductase FabG low > 52
Pseudomonas fluorescens FW300-N2E3 0.23 AO353_08035 hypothetical protein 0.70 AO353_12610 3-ketoacyl-ACP reductase low > 101
Pseudomonas simiae WCS417 0.22 PS417_26530 hypothetical protein 0.71 PS417_02035 3-ketoacyl-ACP reductase low > 88
Escherichia coli ECRC100 0.22 OKFHMN_03760 yceI YceI family protein 0.59 OKFHMN_16565 fabG 3-ketoacyl-ACP reductase FabG2 — —
Escherichia coli ECRC102 0.22 NIAGMN_24070 yceI YceI family protein 0.59 NIAGMN_14335 fabG 3-ketoacyl-ACP reductase FabG2 — —
Escherichia coli ECRC101 0.22 MCAODC_23120 yceI YceI family protein 0.59 MCAODC_07085 fabG 3-ketoacyl-ACP reductase FabG2 low > 87
Escherichia coli ECRC99 0.22 KEDOAH_23995 yceI YceI family protein 0.59 KEDOAH_11575 fabG 3-ketoacyl-ACP reductase FabG2 — —
Escherichia coli ECRC98 0.22 JDDGAC_07420 yceI YceI family protein 0.59 JDDGAC_20195 fabG 3-ketoacyl-ACP reductase FabG2 low > 86
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS28185 YceI family protein 0.71 PFLU_RS02080 3-oxoacyl-ACP reductase FabG low > 109
Escherichia fergusonii Becca 0.21 EFB2_02918 Protein YceI 0.59 EFB2_03038 3-oxoacyl-[acyl-carrier-protein] reductase FabG low > 86
Pseudomonas fluorescens SBW25 0.21 PFLU_RS28185 YceI family protein 0.71 PFLU_RS02080 3-oxoacyl-ACP reductase FabG low > 109
Escherichia coli Nissle 1917 0.21 ECOLIN_RS06130 YceI family protein 0.59 ECOLIN_RS05445 3-ketoacyl-ACP reductase FabG2 — —
Pseudomonas stutzeri RCH2 0.21 Psest_0308 Uncharacterized conserved protein 0.72 Psest_3703 3-oxoacyl-(acyl-carrier-protein) reductase, putative — —
Enterobacter asburiae PDN3 0.21 EX28DRAFT_1875 Uncharacterized conserved protein 0.59 EX28DRAFT_4091 3-oxoacyl-(acyl-carrier-protein) reductase, putative low > 76
Enterobacter sp. TBS_079 0.20 MPMX20_01736 Protein YceI 0.60 MPMX20_04371 3-oxoacyl-[acyl-carrier-protein] reductase FabG low > 85
Shewanella amazonensis SB2B 0.20 Sama_0950 hypothetical protein (RefSeq) 0.65 Sama_3393 fabG 3-ketoacyl-(acyl-carrier-protein) reductase (RefSeq) low > 62
Pseudomonas sp. S08-1 0.20 OH686_10840 Protein yceI precursor 0.74 OH686_09970 3-oxoacyl-[ACP] reductase FadG2, NOT low > 80
Serratia liquefaciens MT49 0.20 IAI46_09690 YceI family protein 0.61 IAI46_04100 3-oxoacyl-ACP reductase FabG low > 86
Shewanella loihica PV-4 0.19 Shew_1121 hypothetical protein (RefSeq) 0.65 Shew_3525 fabG 3-ketoacyl-(acyl-carrier-protein) reductase (RefSeq) low > 60
Dickeya dianthicola 67-19 0.19 HGI48_RS13255 YceI family protein 0.62 HGI48_RS21530 3-oxoacyl-ACP reductase FabG low > 71
Dickeya dianthicola ME23 0.19 DZA65_RS13730 YceI family protein 0.61 DZA65_RS22510 3-oxoacyl-ACP reductase FabG low > 75
Shewanella sp. ANA-3 0.18 Shewana3_1179 hypothetical protein (RefSeq) 0.61 Shewana3_0327 fabG 3-ketoacyl-(acyl-carrier-protein) reductase (RefSeq) — —
Rahnella sp. WP5 0.18 EX31_RS24340 YceI family protein 0.60 EX31_RS21240 3-oxoacyl-ACP reductase FabG low > 89
Pseudomonas fluorescens FW300-N2E2 0.18 Pf6N2E2_4634 Protein yceI precursor 0.70 Pf6N2E2_3728 3-oxoacyl-[ACP] reductase (EC 1.1.1.100) low > 103
Shewanella oneidensis MR-1 0.16 SO3370 conserved hypothetical protein (NCBI ptt file) 0.62 SO4382 fabG-2 3-oxoacyl-(acyl-carrier-protein) reductase (NCBI ptt file) low > 76

Not shown: 27 genomes with orthologs for HSERO_RS03410 only; 12 genomes with orthologs for HSERO_RS18540 only