Conservation of cofitness between HSERO_RS21535 and HSERO_RS11465 in Herbaspirillum seropedicae SmR1

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS21535 NADH dehydrogenase 1.0 HSERO_RS11465 sodium:proton antiporter 0.40 13
Paraburkholderia sabiae LMG 24235 0.74 QEN71_RS13375 alkyl hydroperoxide reductase subunit F 0.48 QEN71_RS19280 Na+/H+ antiporter NhaA low > 153
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_22810 alkyl hydroperoxide reductase subunit F 0.48 AO356_05390 sodium:proton antiporter — —
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_448 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.48 Pf6N2E2_2937 Na+/H+ antiporter NhaA type — —
Pseudomonas sp. RS175 0.71 PFR28_02481 Alkyl hydroperoxide reductase subunit F 0.49 PFR28_00526 Na(+)/H(+) antiporter NhaA — —
Pseudomonas fluorescens GW456-L13 0.71 PfGW456L13_2928 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.48 PfGW456L13_4617 Na+/H+ antiporter NhaA type — —
Pseudomonas fluorescens FW300-N2E3 0.71 AO353_26960 alkyl hydroperoxide reductase subunit F 0.48 AO353_17055 sodium:proton antiporter — —
Pseudomonas simiae WCS417 0.71 PS417_14040 alkyl hydroperoxide reductase 0.49 PS417_06545 pH-dependent sodium/proton antiporter — —
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_5010 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.47 Pf1N1B4_3202 Na+/H+ antiporter NhaA type — —
Azospirillum sp. SherDot2 0.71 MPMX19_05836 Alkyl hydroperoxide reductase subunit F 0.48 MPMX19_02315 Na(+)/H(+) antiporter NhaA low > 112
Pseudomonas putida KT2440 0.70 PP_2440 Alkyl hydroperoxide reductase subunit F 0.48 PP_1132 Na(+)/H(+) antiporter NhaA 1 0.12 59
Azospirillum brasilense Sp245 0.69 AZOBR_RS20515 alkyl hydroperoxide reductase subunit F 0.43 AZOBR_RS12965 sodium:proton antiporter low > 97
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_2974 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.45 Psyr_4210 sodium/proton antiporter, NhaA family — —
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_2974 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.45 Psyr_4210 sodium/proton antiporter, NhaA family — —
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS14575 alkyl hydroperoxide reductase subunit F 0.49 PFLU_RS06575 Na+/H+ antiporter NhaA — —
Pseudomonas fluorescens SBW25 0.69 PFLU_RS14575 alkyl hydroperoxide reductase subunit F 0.49 PFLU_RS06575 Na+/H+ antiporter NhaA — —
Lysobacter sp. OAE881 0.69 ABIE51_RS05480 alkyl hydroperoxide reductase subunit F 0.43 ABIE51_RS04100 Na+/H+ antiporter NhaA — —
Rhodospirillum rubrum S1H 0.68 Rru_A1417 thioredoxin-disulfide reductase (NCBI) 0.48 Rru_A0128 Na+/H+ antiporter NhaA (NCBI) low > 58
Brevundimonas sp. GW460-12-10-14-LB2 0.65 A4249_RS04545 alkyl hydroperoxide reductase subunit F 0.32 A4249_RS10415 Na+/H+ antiporter NhaA — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.65 GFF3915 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.32 GFF4701 Na+/H+ antiporter NhaA type low > 90
Caulobacter crescentus NA1000 0.65 CCNA_03013 alkyl hydroperoxide reductase subunit F 0.44 CCNA_00459 Na+/H+ antiporter nhaA low > 66
Caulobacter crescentus NA1000 Δfur 0.65 CCNA_03013 alkyl hydroperoxide reductase subunit F 0.44 CCNA_00459 Na+/H+ antiporter nhaA low > 67
Sphingomonas koreensis DSMZ 15582 0.63 Ga0059261_0156 alkyl hydroperoxide reductase subunit F 0.39 Ga0059261_2282 sodium/proton antiporter, NhaA family (TC 2.A.33.1.1) — —
Shewanella sp. ANA-3 0.62 Shewana3_3326 FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) 0.47 Shewana3_3038 Na+/H+ antiporter NhaA (RefSeq) low > 73
Shewanella oneidensis MR-1 0.62 SO0956 ahpF alkyl hydroperoxide reductase, F subunit (NCBI ptt file) 0.47 SO1336 nhaA Na+/H+ antiporter (NCBI ptt file) low > 76
Klebsiella michiganensis M5al 0.62 BWI76_RS07945 alkyl hydroperoxide reductase subunit F 0.47 BWI76_RS04315 Na+/H+ antiporter NhaA low > 92
Shewanella amazonensis SB2B 0.61 Sama_0618 alkyl hydroperoxide reductase, F subunit (RefSeq) 0.45 Sama_0868 Na+/H+ antiporter (RefSeq) low > 62
Enterobacter asburiae PDN3 0.60 EX28DRAFT_2349 alkyl hydroperoxide reductase subunit F 0.46 EX28DRAFT_3628 Na+/H+ antiporter NhaA low > 76
Shewanella loihica PV-4 0.60 Shew_0793 FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) 0.45 Shew_1042 Na+/H+ antiporter NhaA (RefSeq) low > 60
Escherichia coli ECRC99 0.60 KEDOAH_20465 Alkyl hydroperoxide reductase subunit F 0.47 KEDOAH_17125 nhaA Na+/H+ antiporter NhaA — —
Escherichia coli ECRC98 0.60 JDDGAC_11150 Alkyl hydroperoxide reductase subunit F 0.47 JDDGAC_14625 nhaA Na+/H+ antiporter NhaA low > 86
Escherichia coli ECOR27 0.60 NOLOHH_23880 Alkyl hydroperoxide reductase subunit F 0.47 NOLOHH_03360 nhaA Na+/H+ antiporter NhaA low > 75
Escherichia coli ECRC62 0.60 BNILDI_21890 Alkyl hydroperoxide reductase subunit F 0.47 BNILDI_08245 nhaA Na+/H+ antiporter NhaA low > 75
Pectobacterium carotovorum WPP14 0.60 HER17_RS02550 alkyl hydroperoxide reductase subunit F 0.46 HER17_RS02850 Na+/H+ antiporter NhaA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_03099 Alkyl hydroperoxide reductase subunit F 0.47 OHPLBJKB_03642 Na(+)/H(+) antiporter NhaA low > 73
Escherichia fergusonii Becca 0.60 EFB2_03485 Alkyl hydroperoxide reductase subunit F 0.49 EFB2_04024 Na(+)/H(+) antiporter NhaA low > 86
Escherichia coli ECRC100 0.60 OKFHMN_07505 Alkyl hydroperoxide reductase subunit F 0.47 OKFHMN_11030 nhaA Na+/H+ antiporter NhaA low > 80
Escherichia coli ECRC102 0.60 NIAGMN_05560 Alkyl hydroperoxide reductase subunit F 0.47 NIAGMN_08880 nhaA Na+/H+ antiporter NhaA — —
Escherichia coli ECRC101 0.60 MCAODC_26720 Alkyl hydroperoxide reductase subunit F 0.47 MCAODC_01545 nhaA Na+/H+ antiporter NhaA low > 87
Escherichia coli ECOR38 0.60 HEPCGN_00775 Alkyl hydroperoxide reductase subunit F 0.47 HEPCGN_09015 nhaA Na+/H+ antiporter NhaA low > 87
Escherichia coli BL21 0.60 ECD_00575 alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding 0.47 ECD_00018 sodium-proton antiporter low > 61
Pantoea sp. MT58 0.60 IAI47_06795 alkyl hydroperoxide reductase subunit F 0.46 IAI47_16165 Na+/H+ antiporter NhaA — —
Escherichia coli BW25113 0.60 b0606 ahpF alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides (VIMSS) 0.46 b0019 nhaA pH-dependent sodium/proton antiporter (NCBI) low > 76
Escherichia coli Nissle 1917 0.60 ECOLIN_RS03325 alkyl hydroperoxide reductase subunit F 0.49 ECOLIN_RS00105 Na+/H+ antiporter NhaA low > 55
Enterobacter sp. TBS_079 0.60 MPMX20_01272 Alkyl hydroperoxide reductase subunit F 0.46 MPMX20_00722 Na(+)/H(+) antiporter NhaA low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF4514 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.47 GFF1119 Na+/H+ antiporter NhaA type low > 78
Dickeya dianthicola 67-19 0.59 HGI48_RS02465 alkyl hydroperoxide reductase subunit F 0.44 HGI48_RS18295 Na+/H+ antiporter NhaA — —
Dickeya dianthicola ME23 0.59 DZA65_RS02570 alkyl hydroperoxide reductase subunit F 0.45 DZA65_RS19435 Na+/H+ antiporter NhaA — —
Dickeya dadantii 3937 0.59 DDA3937_RS02520 alkyl hydroperoxide reductase subunit F 0.45 DDA3937_RS18360 Na+/H+ antiporter NhaA — —
Alteromonas macleodii MIT1002 0.46 MIT1002_01785 NADH dehydrogenase 0.46 MIT1002_00520 Sodium/proton antiporter NhaA low > 70
Bacteroides thetaiotaomicron VPI-5482 0.42 BT2811 alkyl hydroperoxide reductase subunit F (NCBI ptt file) 0.32 BT0634 Na+/H+ antiporter 1 (NCBI ptt file) low > 81
Parabacteroides merdae CL09T00C40 0.40 HMPREF1078_RS04200 alkyl hydroperoxide reductase subunit F 0.32 HMPREF1078_RS00855 Na+/H+ antiporter NhaA low > 61
Bacteroides stercoris CC31F 0.40 HMPREF1181_RS02150 alkyl hydroperoxide reductase subunit F 0.34 HMPREF1181_RS16585 Na+/H+ antiporter NhaA low > 56
Phocaeicola dorei CL03T12C01 0.40 ABI39_RS03990 alkyl hydroperoxide reductase subunit F 0.34 ABI39_RS20170 Na+/H+ antiporter NhaA 0.36 60
Phocaeicola vulgatus CL09T03C04 0.39 HMPREF1058_RS09535 alkyl hydroperoxide reductase subunit F 0.34 HMPREF1058_RS06405 Na+/H+ antiporter NhaA low > 67

Not shown: 23 genomes with orthologs for HSERO_RS21535 only; 11 genomes with orthologs for HSERO_RS11465 only