Conservation of cofitness between HSERO_RS01565 and HSERO_RS08100 in Herbaspirillum seropedicae SmR1

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS01565 hemolysin secretion protein D 1.0 HSERO_RS08100 nicotinate phosphoribosyltransferase 0.32 4
Paraburkholderia graminis OAS925 0.58 ABIE53_004107 multidrug efflux system membrane fusion protein 0.78 ABIE53_003069 nicotinate phosphoribosyltransferase 0.20 27
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS22510 MexE family multidrug efflux RND transporter periplasmic adaptor subunit 0.78 BPHYT_RS14535 nicotinate phosphoribosyltransferase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_03189 membrane fusion protein, multidrug efflux system 0.77 H281DRAFT_04330 nicotinate phosphoribosyltransferase low > 103
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS19405 efflux RND transporter periplasmic adaptor subunit 0.74 ABZR87_RS10040 nicotinate phosphoribosyltransferase low > 80
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS20100 efflux RND transporter periplasmic adaptor subunit 0.77 QEN71_RS04445 nicotinate phosphoribosyltransferase low > 153
Ralstonia solanacearum PSI07 0.54 RPSI07_RS05170 efflux RND transporter periplasmic adaptor subunit 0.75 RPSI07_RS19135 nicotinate phosphoribosyltransferase low > 81
Azospirillum sp. SherDot2 0.52 MPMX19_02967 Efflux pump periplasmic linker BepF 0.21 MPMX19_03477 Nicotinate phosphoribosyltransferase low > 112
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS27680 MexE family multidrug efflux RND transporter periplasmic adaptor subunit 0.75 RR42_RS14205 nicotinate phosphoribosyltransferase low > 128
Variovorax sp. SCN45 0.46 GFF430 RND efflux system, membrane fusion protein 0.70 GFF2870 Nicotinate phosphoribosyltransferase (EC 6.3.4.21) low > 127
Variovorax sp. OAS795 0.45 ABID97_RS17355 efflux RND transporter periplasmic adaptor subunit 0.71 ABID97_RS10590 nicotinate phosphoribosyltransferase low > 91
Acidovorax sp. GW101-3H11 0.44 Ac3H11_259 Probable Co/Zn/Cd efflux system membrane fusion protein 0.70 Ac3H11_2601 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) low > 79
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_2967 Secretion protein HlyD 0.48 Psyr_0595 Nicotinate phosphoribosyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_2967 Secretion protein HlyD 0.48 Psyr_0595 Nicotinate phosphoribosyltransferase low > 86
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_947 Multidrug efflux membrane fusion protein MexE 0.49 Pf6N2E2_3585 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) low > 103
Pseudomonas sp. RS175 0.43 PFR28_02012 Multidrug resistance protein MdtA 0.49 PFR28_05149 Nicotinate phosphoribosyltransferase 2 low > 88
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_3061 Multidrug efflux membrane fusion protein MexE 0.49 PfGW456L13_129 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) low > 87
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_4865 Multidrug efflux membrane fusion protein MexE 0.49 Pf1N1B4_1386 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) low > 87
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_23965 RND transporter MFP subunit 0.48 AO353_13320 nicotinate phosphoribosyltransferase low > 101
Pseudomonas putida KT2440 0.41 PP_3425 Efflux transporter RND family, MFP subunit 0.43 PP_4868 Nicotinate phosphoribosyltransferase low > 96
Rhizobium sp. OAE497 0.41 ABIE40_RS14880 efflux RND transporter periplasmic adaptor subunit 0.26 ABIE40_RS00645 nicotinate phosphoribosyltransferase low > 107
Agrobacterium fabrum C58 0.40 Atu2482 HlyD family secretion protein 0.26 Atu0213 nicotinate phosphoribosyltransferase low > 89
Pseudomonas stutzeri RCH2 0.40 Psest_2145 RND family efflux transporter, MFP subunit 0.48 Psest_1171 nicotinate phosphoribosyltransferase low > 67
Pseudomonas fluorescens SBW25 0.40 PFLU_RS14265 efflux RND transporter periplasmic adaptor subunit 0.48 PFLU_RS02705 nicotinate phosphoribosyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS14265 efflux RND transporter periplasmic adaptor subunit 0.48 PFLU_RS02705 nicotinate phosphoribosyltransferase low > 109
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_27600 RND transporter MFP subunit 0.49 AO356_08520 nicotinate phosphoribosyltransferase low > 104
Pseudomonas simiae WCS417 0.39 PS417_13195 RND transporter MFP subunit 0.48 PS417_02635 nicotinate phosphoribosyltransferase 0.16 45
Pseudomonas sp. S08-1 0.38 OH686_01010 Multidrug efflux system, membrane fusion component 0.48 OH686_03820 nicotinate phosphoribosyltransferase low > 80
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS15405 efflux RND transporter periplasmic adaptor subunit 0.73 ABZR86_RS00460 nicotinate phosphoribosyltransferase low > 74
Sinorhizobium meliloti 1021 0.37 SMc01094 multidrug efflux system transmembrane protein 0.27 SMc02276 nicotinate phosphoribosyltransferase low > 103
Pantoea sp. MT58 0.37 IAI47_10305 efflux RND transporter periplasmic adaptor subunit 0.39 IAI47_12750 nicotinate phosphoribosyltransferase low > 76
Enterobacter asburiae PDN3 0.37 EX28DRAFT_1473 RND family efflux transporter, MFP subunit 0.39 EX28DRAFT_2005 nicotinate phosphoribosyltransferase low > 76
Serratia liquefaciens MT49 0.36 IAI46_09930 efflux RND transporter periplasmic adaptor subunit 0.41 IAI46_08765 nicotinate phosphoribosyltransferase low > 86
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS08135 efflux RND transporter periplasmic adaptor subunit 0.73 LRK54_RS14720 nicotinate phosphoribosyltransferase low > 59
Klebsiella michiganensis M5al 0.36 BWI76_RS12950 acriflavin resistance protein AcrA 0.39 BWI76_RS09885 nicotinate phosphoribosyltransferase low > 92
Enterobacter sp. TBS_079 0.36 MPMX20_01154 Multidrug resistance protein MdtE 0.40 MPMX20_01589 Nicotinate phosphoribosyltransferase low > 85
Rahnella sp. WP5 0.36 EX31_RS01490 efflux RND transporter periplasmic adaptor subunit 0.39 EX31_RS18130 nicotinate phosphoribosyltransferase low > 89
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.3478.1 RND efflux system, membrane fusion protein CmeA 0.68 Xcc-8004.4407.1 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) low > 74
Rhodanobacter denitrificans MT42 0.35 LRK55_RS07885 efflux RND transporter periplasmic adaptor subunit 0.73 LRK55_RS14435 nicotinate phosphoribosyltransferase low > 63
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_14950 Efflux RND transporter periplasmic adaptor subunit 0.71 OKGIIK_03545 pncB nicotinate phosphoribosyltransferase low > 52
Brevundimonas sp. GW460-12-10-14-LB2 0.31 A4249_RS09930 efflux RND transporter periplasmic adaptor subunit 0.25 A4249_RS08365 nicotinate phosphoribosyltransferase low > 48
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF4247 RND efflux system, membrane fusion protein CmeA 0.39 GFF3695 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) low > 78
Bosea sp. OAE506 0.28 ABIE41_RS17115 efflux RND transporter periplasmic adaptor subunit 0.27 ABIE41_RS14420 nicotinate phosphoribosyltransferase — —

Not shown: 15 genomes with orthologs for HSERO_RS01565 only; 24 genomes with orthologs for HSERO_RS08100 only