Conservation of cofitness between HSERO_RS19630 and HSERO_RS06245 in Herbaspirillum seropedicae SmR1

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS19630 AMP nucleosidase 1.0 HSERO_RS06245 catalase-peroxidase 0.41 8
Paraburkholderia sabiae LMG 24235 0.69 QEN71_RS17860 AMP nucleosidase 0.75 QEN71_RS29740 catalase/peroxidase HPI low > 153
Burkholderia phytofirmans PsJN 0.68 BPHYT_RS33635 AMP nucleosidase 0.75 BPHYT_RS10310 catalase-peroxidase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.68 H281DRAFT_06027 AMP nucleosidase 0.70 H281DRAFT_00053 catalase-peroxidase low > 103
Azospirillum sp. SherDot2 0.65 MPMX19_00597 AMP nucleosidase 0.64 MPMX19_03084 Catalase-peroxidase low > 112
Acidovorax sp. GW101-3H11 0.61 Ac3H11_4669 AMP nucleosidase (EC 3.2.2.4) 0.69 Ac3H11_135 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 79
Variovorax sp. SCN45 0.59 GFF3583 AMP nucleosidase (EC 3.2.2.4) 0.73 GFF4692 Catalase-peroxidase KatG (EC 1.11.1.21) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.59 GFF370 AMP nucleosidase (EC 3.2.2.4) 0.63 GFF637 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 90
Agrobacterium fabrum C58 0.57 Atu1006 AMP nucleosidase 0.53 Atu4642 catalase — —
Rhizobium sp. OAE497 0.56 ABIE40_RS05905 AMP nucleosidase 0.65 ABIE40_RS15040 catalase/peroxidase HPI low > 107
Sinorhizobium meliloti 1021 0.56 SMc02386 AMP nucleosidase 0.66 SMa2379 KatB catalase/peroxidase — —
Phaeobacter inhibens DSM 17395 0.53 PGA1_c34250 AMP nucleosidase Amn 0.53 PGA1_78p00050 peroxidase/catalase HPI low > 62
Dinoroseobacter shibae DFL-12 0.53 Dshi_3289 AMP nucleosidase (RefSeq) 0.49 Dshi_3801 catalase/peroxidase HPI (RefSeq) — —
Ralstonia solanacearum UW163 0.52 UW163_RS23015 AMP nucleosidase 0.73 UW163_RS00460 catalase/peroxidase HPI — —
Ralstonia solanacearum PSI07 0.52 RPSI07_RS00695 AMP nucleosidase 0.72 RPSI07_RS20110 catalase/peroxidase HPI low > 81
Ralstonia solanacearum IBSBF1503 0.52 RALBFv3_RS22470 AMP nucleosidase 0.73 RALBFv3_RS13105 catalase/peroxidase HPI 0.86 22
Cupriavidus basilensis FW507-4G11 0.52 RR42_RS21185 AMP nucleosidase 0.72 RR42_RS26270 hydroperoxidase low > 128
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS17145 AMP nucleosidase 0.65 ABZR87_RS01240 catalase/peroxidase HPI low > 80
Bosea sp. OAE506 0.42 ABIE41_RS04230 AMP nucleosidase 0.54 ABIE41_RS01200 catalase/peroxidase HPI low > 77
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF3974 AMP nucleosidase (EC 3.2.2.4) 0.61 GFF2330 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 78
Caulobacter crescentus NA1000 0.41 CCNA_00265 AMP nucleosidase 0.63 CCNA_03138 peroxidase/catalase katG — —
Caulobacter crescentus NA1000 Δfur 0.41 CCNA_00265 AMP nucleosidase 0.63 CCNA_03138 peroxidase/catalase katG — —
Enterobacter sp. TBS_079 0.41 MPMX20_02987 AMP nucleosidase 0.61 MPMX20_04528 Catalase-peroxidase low > 85
Brevundimonas sp. GW460-12-10-14-LB2 0.41 A4249_RS14550 AMP nucleosidase 0.72 A4249_RS12750 catalase/peroxidase HPI low > 48
Pseudomonas stutzeri RCH2 0.41 Psest_0542 AMP nucleosidase 0.62 Psest_2741 catalase/peroxidase HPI low > 67
Enterobacter asburiae PDN3 0.41 EX28DRAFT_0555 AMP nucleosidase 0.61 EX28DRAFT_4414 catalase/peroxidase HPI low > 76
Klebsiella michiganensis M5al 0.41 BWI76_RS18545 AMP nucleosidase 0.60 BWI76_RS13925 catalase/peroxidase HPI low > 92
Erwinia tracheiphila SCR3 0.41 LU632_RS14885 AMP nucleosidase 0.60 LU632_RS19500 katG catalase/peroxidase HPI — —
Sphingomonas koreensis DSMZ 15582 0.41 Ga0059261_4012 AMP nucleosidase 0.54 Ga0059261_3628 catalase/peroxidase HPI low > 68
Escherichia coli ECRC62 0.41 BNILDI_14920 amn AMP nucleosidase 0.60 BNILDI_05730 katG catalase/peroxidase HPI low > 75
Escherichia coli ECOR38 0.41 HEPCGN_03515 amn AMP nucleosidase 0.60 HEPCGN_12305 katG catalase/peroxidase HPI low > 87
Escherichia coli ECRC102 0.41 NIAGMN_22685 amn AMP nucleosidase 0.60 NIAGMN_11415 katG catalase/peroxidase HPI — —
Escherichia coli Nissle 1917 0.41 ECOLIN_RS11455 AMP nucleosidase 0.60 ECOLIN_RS22765 catalase/peroxidase HPI — —
Escherichia coli ECRC100 0.41 OKFHMN_25180 amn AMP nucleosidase 0.60 OKFHMN_13660 katG catalase/peroxidase HPI low > 80
Escherichia coli BL21 0.41 ECD_01894 AMP nucleosidase 0.60 ECD_03828 catalase-peroxidase HPI, heme b-containing low > 61
Escherichia coli ECOR27 0.41 NOLOHH_16125 amn AMP nucleosidase 0.60 NOLOHH_05805 katG catalase/peroxidase HPI low > 75
Escherichia coli BW25113 0.41 b1982 amn AMP nucleosidase (NCBI) 0.60 b3942 katG catalase/hydroperoxidase HPI(I) (NCBI) low > 76
Escherichia fergusonii Becca 0.41 EFB2_01930 AMP nucleosidase 0.60 EFB2_04671 Catalase-peroxidase low > 86
Escherichia coli ECRC101 0.41 MCAODC_20210 amn AMP nucleosidase 0.60 MCAODC_04160 katG catalase/peroxidase HPI low > 87
Escherichia coli ECRC99 0.41 KEDOAH_02930 amn AMP nucleosidase 0.60 KEDOAH_14500 katG catalase/peroxidase HPI — —
Escherichia coli ECRC98 0.41 JDDGAC_29310 amn AMP nucleosidase 0.60 JDDGAC_17285 katG catalase/peroxidase HPI low > 86
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_4337 AMP nucleosidase 0.72 Psyr_4208 heme catalase/peroxidase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_4337 AMP nucleosidase 0.72 Psyr_4208 heme catalase/peroxidase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_01726 AMP nucleosidase 0.60 OHPLBJKB_04108 Catalase-peroxidase low > 73
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_06335 AMP nucleosidase 0.70 AO353_23210 hydroperoxidase low > 101
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_2721 AMP nucleosidase (EC 3.2.2.4) 0.70 Pf1N1B4_4230 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 87
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_15450 AMP nucleosidase 0.72 AO356_07735 hydroperoxidase low > 104
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_5027 AMP nucleosidase (EC 3.2.2.4) 0.72 Pf6N2E2_3430 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 103
Dickeya dadantii 3937 0.40 DDA3937_RS06940 AMP nucleosidase 0.70 DDA3937_RS07265 catalase/peroxidase HPI low > 74
Pseudomonas putida KT2440 0.40 PP_4779 AMP nucleosidase 0.72 PP_3668 Catalase-peroxidase low > 96
Pantoea sp. MT58 0.40 IAI47_07865 AMP nucleosidase 0.58 IAI47_07215 catalase/peroxidase HPI low > 76
Serratia liquefaciens MT49 0.40 IAI46_16720 AMP nucleosidase 0.67 IAI46_17030 catalase/peroxidase HPI low > 86
Dickeya dianthicola ME23 0.39 DZA65_RS07265 AMP nucleosidase 0.70 DZA65_RS08685 catalase/peroxidase HPI low > 75
Dickeya dianthicola 67-19 0.39 HGI48_RS06920 AMP nucleosidase 0.70 HGI48_RS08090 catalase/peroxidase HPI low > 71
Pectobacterium carotovorum WPP14 0.39 HER17_RS14005 AMP nucleosidase 0.56 HER17_RS09165 catalase/peroxidase HPI low > 75
Rahnella sp. WP5 0.39 EX31_RS17755 AMP nucleosidase 0.59 EX31_RS11140 catalase/peroxidase HPI low > 89
Pseudomonas sp. S08-1 0.39 OH686_08855 AMP nucleosidase 0.64 OH686_15490 catalase/peroxidase HPI low > 80

Not shown: 10 genomes with orthologs for HSERO_RS19630 only; 18 genomes with orthologs for HSERO_RS06245 only