Conservation of cofitness between HSERO_RS07145 and HSERO_RS05500 in Herbaspirillum seropedicae SmR1

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS07145 hypothetical protein 1.0 HSERO_RS05500 transaldolase 0.36 8
Acidovorax sp. GW101-3H11 0.25 Ac3H11_1208 FIG005080: Possible exported protein 0.66 Ac3H11_2059 Transaldolase (EC 2.2.1.2) low > 79
Variovorax sp. SCN45 0.24 GFF5444 FIG005080: Possible exported protein 0.65 GFF5266 Transaldolase (EC 2.2.1.2) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.23 GFF2534 FIG005080: Possible exported protein 0.66 GFF1363 Transaldolase (EC 2.2.1.2) low > 90
Variovorax sp. OAS795 0.22 ABID97_RS02005 YhdP family protein 0.64 ABID97_RS07095 transaldolase low > 91
Ralstonia sp. UNC404CL21Col 0.21 ABZR87_RS01095 YhdP family protein 0.74 ABZR87_RS11000 transaldolase low > 80
Ralstonia solanacearum GMI1000 0.21 RS_RS13305 TIGR02099 family protein 0.73 RS_RS06170 transaldolase low > 80
Paraburkholderia graminis OAS925 0.21 ABIE53_000853 uncharacterized protein (TIGR02099 family) 0.71 ABIE53_001416 transaldolase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_04690 TIGR02099 family protein 0.71 H281DRAFT_00286 transaldolase low > 103
Ralstonia solanacearum PSI07 0.21 RPSI07_RS11860 TIGR02099 family protein 0.73 RPSI07_RS18015 transaldolase low > 81
Ralstonia solanacearum UW163 0.21 UW163_RS08180 TIGR02099 family protein 0.73 UW163_RS12825 transaldolase — —
Ralstonia solanacearum IBSBF1503 0.21 RALBFv3_RS05445 TIGR02099 family protein 0.73 RALBFv3_RS15360 transaldolase low > 76
Paraburkholderia sabiae LMG 24235 0.21 QEN71_RS26545 AsmA-like C-terminal region-containing protein 0.72 QEN71_RS24595 transaldolase low > 153
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS03550 hypothetical protein 0.71 BPHYT_RS06045 transaldolase low > 109
Cupriavidus basilensis FW507-4G11 0.19 RR42_RS05885 hypothetical protein 0.71 RR42_RS13050 transaldolase low > 128
Dyella japonica UNC79MFTsu3.2 0.09 ABZR86_RS21725 YhdP family protein 0.55 ABZR86_RS12545 transaldolase low > 74
Pseudomonas syringae pv. syringae B728a 0.08 Psyr_4158 conserved hypothetical protein 0.58 Psyr_1914 transaldolase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.08 Psyr_4158 conserved hypothetical protein 0.58 Psyr_1914 transaldolase low > 86
Lysobacter sp. OAE881 0.08 ABIE51_RS06790 YhdP family protein 0.55 ABIE51_RS02125 transaldolase low > 62
Serratia liquefaciens MT49 0.08 IAI46_22695 AsmA2 domain-containing protein YhdP 0.54 IAI46_03055 transaldolase low > 86
Klebsiella michiganensis M5al 0.07 BWI76_RS25475 TIGR02099 family protein 0.56 BWI76_RS04270 transaldolase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.07 GFF2139 FIG005080: Possible exported protein 0.56 GFF1083 Transaldolase (EC 2.2.1.2) low > 78
Vibrio cholerae E7946 ATCC 55056 0.07 CSW01_02210 DUF3971 domain-containing protein 0.55 CSW01_17325 transaldolase low > 62
Dickeya dadantii 3937 0.07 DDA3937_RS01455 AsmA2 domain-containing protein YhdP 0.54 DDA3937_RS18395 transaldolase low > 74
Enterobacter sp. TBS_079 0.07 MPMX20_04152 hypothetical protein 0.57 MPMX20_00716 Transaldolase B low > 85
Pseudomonas sp. S08-1 0.07 OH686_08590 Possible exported protein 0.55 OH686_22740 transaldolase — —
Dickeya dianthicola 67-19 0.07 HGI48_RS01375 AsmA2 domain-containing protein YhdP 0.54 HGI48_RS18325 transaldolase low > 71
Escherichia coli BL21 0.07 ECD_03105 DUF3971-AsmA2 domains protein 0.56 ECD_00008 transaldolase B low > 61
Dickeya dianthicola ME23 0.07 DZA65_RS01435 AsmA2 domain-containing protein 0.54 DZA65_RS19465 transaldolase low > 75
Enterobacter asburiae PDN3 0.07 EX28DRAFT_3296 TIGR02099 family protein 0.57 EX28DRAFT_3620 transaldolase low > 76
Escherichia coli ECOR38 0.07 HEPCGN_16615 yhdP AsmA2 domain-containing protein YhdP 0.56 HEPCGN_09085 transaldolase B low > 87
Pseudomonas putida KT2440 0.07 PP_0938 conserved protein of unknown function 0.59 PP_2168 Transaldolase low > 96
Escherichia coli ECRC100 0.07 OKFHMN_17750 yhdP AsmA2 domain-containing protein YhdP 0.56 OKFHMN_11080 transaldolase B low > 80
Escherichia coli ECRC99 0.07 KEDOAH_10400 yhdP AsmA2 domain-containing protein YhdP 0.56 KEDOAH_17075 transaldolase B — —
Escherichia coli ECRC98 0.07 JDDGAC_21375 yhdP AsmA2 domain-containing protein YhdP 0.56 JDDGAC_14675 transaldolase B low > 86
Escherichia coli ECRC102 0.07 NIAGMN_15510 yhdP AsmA2 domain-containing protein YhdP 0.56 NIAGMN_08930 transaldolase B — —
Escherichia coli ECRC101 0.07 MCAODC_08270 yhdP AsmA2 domain-containing protein YhdP 0.56 MCAODC_01595 transaldolase B low > 87
Escherichia fergusonii Becca 0.07 EFB2_00585 hypothetical protein 0.56 EFB2_04035 Transaldolase B low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.07 OHPLBJKB_00459 hypothetical protein 0.56 OHPLBJKB_03652 Transaldolase low > 73
Escherichia coli ECOR27 0.07 NOLOHH_09535 yhdP AsmA2 domain-containing protein YhdP 0.56 NOLOHH_03410 transaldolase B low > 75
Escherichia coli ECRC62 0.07 BNILDI_01985 yhdP AsmA2 domain-containing protein YhdP 0.56 BNILDI_08195 transaldolase B low > 75
Escherichia coli BW25113 0.07 b4472 yhdP conserved membrane protein, predicted transporter (NCBI) 0.56 b0008 talB transaldolase B (NCBI) low > 76
Escherichia coli Nissle 1917 0.07 ECOLIN_RS18600 AsmA2 domain-containing protein YhdP 0.56 ECOLIN_RS00045 transaldolase low > 55
Rahnella sp. WP5 0.06 EX31_RS12260 AsmA2 domain-containing protein 0.54 EX31_RS03920 transaldolase low > 89
Pseudomonas stutzeri RCH2 0.06 Psest_3322 TIGR02099 family protein 0.59 Psest_2708 transaldolase low > 67
Pseudomonas fluorescens FW300-N2E2 0.06 Pf6N2E2_3282 FIG005080: Possible exported protein 0.57 Pf6N2E2_2258 Transaldolase (EC 2.2.1.2) low > 103
Pseudomonas fluorescens FW300-N2E3 0.06 AO353_05225 hypothetical protein 0.59 AO353_00310 transaldolase low > 101
Pseudomonas fluorescens GW456-L13 0.06 PfGW456L13_5028 FIG005080: Possible exported protein 0.57 PfGW456L13_4009 Transaldolase (EC 2.2.1.2) low > 87
Pseudomonas fluorescens FW300-N2C3 0.06 AO356_07105 hypothetical protein 0.57 AO356_02175 transaldolase low > 104
Pectobacterium carotovorum WPP14 0.06 HER17_RS20145 AsmA2 domain-containing protein YhdP 0.54 HER17_RS02815 transaldolase low > 75
Pseudomonas sp. RS175 0.06 PFR28_00159 hypothetical protein 0.57 PFR28_01142 Transaldolase low > 88
Shewanella sp. ANA-3 0.06 Shewana3_3643 hypothetical protein (RefSeq) 0.56 Shewana3_3147 transaldolase B (RefSeq) — —
Pseudomonas fluorescens FW300-N1B4 0.05 Pf1N1B4_1094 FIG005080: Possible exported protein 0.57 Pf1N1B4_58 Transaldolase (EC 2.2.1.2) low > 87

Not shown: 4 genomes with orthologs for HSERO_RS07145 only; 17 genomes with orthologs for HSERO_RS05500 only