| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Herbaspirillum seropedicae SmR1 | 1.0 | HSERO_RS05425 | | decarboxylase | 1.0 | HSERO_RS04240 | | C4-dicarboxylate ABC transporter | 0.35 | 3 |
| Burkholderia phytofirmans PsJN | 0.53 | BPHYT_RS22440 | | DNA-binding protein | 0.20 | BPHYT_RS24175 | | C4-dicarboxylate ABC transporter | low | > 109 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.53 | H281DRAFT_03509 | | transcriptional regulator, GntR family | 0.20 | H281DRAFT_05324 | | tripartite ATP-independent transporter solute receptor, DctP family | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.52 | ABIE53_004748 | | GntR family transcriptional regulator/MocR family aminotransferase | 0.20 | ABIE53_006502 | | tripartite ATP-independent transporter DctP family solute receptor | low | > 113 |
| Cupriavidus basilensis FW507-4G11 | 0.52 | RR42_RS21340 | | DNA-binding protein | 0.22 | RR42_RS06535 | | C4-dicarboxylate ABC transporter | low | > 128 |
| Ralstonia sp. UNC404CL21Col | 0.47 | ABZR87_RS05185 | | PLP-dependent aminotransferase family protein | 0.20 | ABZR87_RS21090 | | TRAP transporter substrate-binding protein | low | > 80 |
| Castellaniella sp019104865 MT123 | 0.45 | ABCV34_RS01775 | | PLP-dependent aminotransferase family protein | 0.70 | ABCV34_RS13980 | | TRAP transporter substrate-binding protein | low | > 48 |
| Pectobacterium carotovorum WPP14 | 0.44 | HER17_RS09875 | | PLP-dependent aminotransferase family protein | 0.21 | HER17_RS19675 | | TRAP transporter substrate-binding protein | 0.53 | 21 |
| Klebsiella michiganensis M5al | 0.41 | BWI76_RS26380 | | decarboxylase | 0.19 | BWI76_RS24125 | | hypothetical protein | low | > 92 |
| Rahnella sp. WP5 | 0.41 | EX31_RS00090 | | PLP-dependent aminotransferase family protein | 0.21 | EX31_RS08010 | | TRAP transporter substrate-binding protein | low | > 89 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.40 | GFF2040 | | Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) | 0.27 | GFF5231 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | low | > 90 |
| Pantoea sp. MT58 | 0.39 | IAI47_19480 | | PLP-dependent aminotransferase family protein | 0.22 | IAI47_03230 | | TRAP transporter substrate-binding protein | low | > 76 |
| Azospirillum sp. SherDot2 | 0.34 | MPMX19_03847 | | HTH-type transcriptional regulatory protein GabR | 0.73 | MPMX19_00659 | | C4-dicarboxylate-binding periplasmic protein DctP | low | > 112 |
| Variovorax sp. SCN45 | 0.31 | GFF1662 | | Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) | 0.25 | GFF1519 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | low | > 127 |
| Variovorax sp. OAS795 | 0.30 | ABID97_RS21960 | | PLP-dependent aminotransferase family protein | 0.24 | ABID97_RS19625 | | TRAP transporter substrate-binding protein | low | > 91 |
| Magnetospirillum magneticum AMB-1 | 0.30 | AMB_RS06965 | | PLP-dependent aminotransferase family protein | 0.74 | AMB_RS04560 | | C4-dicarboxylate ABC transporter | low | > 64 |
| Rhodopseudomonas palustris CGA009 | 0.30 | TX73_007155 | | PLP-dependent aminotransferase family protein | 0.65 | TX73_010550 | | TRAP transporter substrate-binding protein | low | > 86 |
| Enterobacter sp. TBS_079 | 0.29 | MPMX20_01059 | | HTH-type transcriptional regulatory protein GabR | 0.20 | MPMX20_04349 | | Solute-binding protein | low | > 85 |
| Acidovorax sp. GW101-3H11 | 0.29 | Ac3H11_1092 | | Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) | 0.27 | Ac3H11_1227 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | low | > 79 |
| Dinoroseobacter shibae DFL-12 | 0.29 | Dshi_0609 | | transcriptional regulator, GntR family with aminotransferase domain (RefSeq) | 0.22 | Dshi_3326 | | TRAP dicarboxylate transporter, DctP subunit (RefSeq) | low | > 64 |
| Rhodospirillum rubrum S1H | 0.28 | Rru_A1143 | | regulatory protein GntR (NCBI) | 0.71 | Rru_A3678 | | TRAP dicarboxylate transporter- DctP subunit (NCBI) | low | > 58 |
| Azospirillum brasilense Sp245 | 0.28 | AZOBR_RS22530 | | transcriptional regulator | 0.77 | AZOBR_RS09605 | | C4-dicarboxylate ABC transporter | low | > 97 |
| Marinobacter adhaerens HP15 | 0.27 | HP15_2761 | | transcriptional regulator, GntR family with aminotransferase domain protein | 0.18 | HP15_2560 | | TRAP dicarboxylate transporter- DctP subunit | low | > 73 |
| Phaeobacter inhibens DSM 17395 | 0.27 | PGA1_262p01530 | | transcriptional regulator, GntR family | 0.36 | PGA1_c20680 | | TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, substrate-binding component (from data) | low | > 62 |
| Dechlorosoma suillum PS | 0.27 | Dsui_2252 | | transcriptional regulator with HTH domain and aminotransferase domain | 0.68 | Dsui_3155 | | tripartite ATP-independent periplasmic transporter solute receptor, DctP family | low | > 51 |
| Pseudomonas fluorescens FW300-N2C3 | 0.27 | AO356_12070 | | GntR family transcriptional regulator | 0.43 | AO356_06880 | | C4-dicarboxylate ABC transporter | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.27 | Pf6N2E2_4288 | | Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) | 0.43 | Pf6N2E2_3238 | | TRAP-type C4-dicarboxylate transport system, periplasmic component | low | > 103 |
| Pseudomonas sp. RS175 | 0.26 | PFR28_04508 | | HTH-type transcriptional regulatory protein GabR | 0.47 | PFR28_00119 | | C4-dicarboxylate-binding periplasmic protein DctP | low | > 88 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.24 | DVU2086 | | transcriptional regulator, GntR family (TIGR) | 0.24 | DVU0707 | dctP | TRAP dicarboxylate family transporter (TIGR) | low | > 55 |
| Rhizobium sp. OAE497 | 0.24 | ABIE40_RS04930 | | PLP-dependent aminotransferase family protein | 0.20 | ABIE40_RS25820 | | sialic acid TRAP transporter substrate-binding protein SiaP | low | > 107 |
| Sinorhizobium meliloti 1021 | 0.15 | SM_b21525 | | transcriptional regulator | 0.28 | SM_b20036 | | ABC transporter substrate-binding protein | low | > 103 |
Not shown: 35 genomes with orthologs for HSERO_RS05425 only; 12 genomes with orthologs for HSERO_RS04240 only