Conservation of cofitness between HSERO_RS13935 and HSERO_RS01180 in Herbaspirillum seropedicae SmR1

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS13935 DNAase 1.0 HSERO_RS01180 acetyl-CoA acetyltransferase 0.43 13
Paraburkholderia sabiae LMG 24235 0.62 QEN71_RS05855 TatD family hydrolase 0.78 QEN71_RS22200 acetyl-CoA C-acetyltransferase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.55 H281DRAFT_00492 TatD DNase family protein 0.78 H281DRAFT_00852 acetyl-CoA acetyltransferase low > 103
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS12705 DNAase 0.78 BPHYT_RS09150 acetyl-CoA acetyltransferase low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.55 GFF744 Putative deoxyribonuclease YjjV 0.70 GFF4796 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) low > 90
Paraburkholderia graminis OAS925 0.54 ABIE53_002767 TatD DNase family protein 0.79 ABIE53_002065 acetyl-CoA C-acetyltransferase low > 113
Castellaniella sp019104865 MT123 0.52 ABCV34_RS04985 TatD family hydrolase 0.46 ABCV34_RS04820 beta-ketothiolase BktB low > 48
Cupriavidus basilensis FW507-4G11 0.52 RR42_RS06110 DNAase 0.80 RR42_RS26090 acetyl-CoA acetyltransferase — —
Variovorax sp. OAS795 0.48 ABID97_RS22725 TatD family hydrolase 0.73 ABID97_RS26575 acetyl-CoA C-acetyltransferase — —
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS10420 TatD family hydrolase 0.75 ABZR87_RS13295 acetyl-CoA C-acetyltransferase low > 80
Ralstonia solanacearum GMI1000 0.47 RS_RS05570 TatD family deoxyribonuclease 0.75 RS_RS08225 acetyl-CoA C-acetyltransferase low > 80
Acidovorax sp. GW101-3H11 0.46 Ac3H11_1737 Putative deoxyribonuclease YjjV 0.66 Ac3H11_2303 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) low > 79
Ralstonia solanacearum PSI07 0.46 RPSI07_RS18600 TatD family deoxyribonuclease 0.74 RPSI07_RS15990 acetyl-CoA C-acetyltransferase low > 81
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS14760 TatD family deoxyribonuclease 0.73 RALBFv3_RS01500 acetyl-CoA C-acetyltransferase low > 76
Ralstonia solanacearum UW163 0.45 UW163_RS12230 TatD family deoxyribonuclease 0.73 UW163_RS14810 acetyl-CoA C-acetyltransferase — —
Variovorax sp. SCN45 0.45 GFF6080 Putative deoxyribonuclease YjjV 0.70 GFF809 Acetyl-CoA acetyltransferase (EC 2.3.1.9) low > 127
Dechlorosoma suillum PS 0.45 Dsui_0503 Mg-dependent DNase 0.42 Dsui_3239 acetyl-CoA acetyltransferase low > 51
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_5078 Putative deoxyribonuclease YjjV 0.41 PfGW456L13_2411 Acetyl-CoA C-acetyltransferase (EC 2.3.1.9) (from data) low > 87
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_3341 Putative deoxyribonuclease YjjV 0.67 Pf6N2E2_2113 Acetyl-CoA acetyltransferase (EC 2.3.1.9) low > 103
Pseudomonas sp. S08-1 0.36 OH686_16550 Putative deoxyribonuclease YjjV 0.67 OH686_17215 Acetyl-CoA acetyltransferase low > 80
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_07345 hydrolase TatD 0.67 AO356_21640 acetyl-CoA C-acetyltransferase [EC: 2.3.1.9] (from data) low > 104
Pseudomonas fluorescens SBW25 0.35 PFLU_RS04000 TatD family hydrolase 0.67 PFLU_RS10575 acetyl-CoA C-acetyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS04000 TatD family hydrolase 0.67 PFLU_RS10575 acetyl-CoA C-acetyltransferase low > 109
Pseudomonas simiae WCS417 0.35 PS417_03955 hydrolase TatD 0.67 PS417_10515 acetyl-CoA acetyltransferase low > 88
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_1148 Putative deoxyribonuclease YjjV 0.67 Pf1N1B4_5835 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) low > 87
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_05495 hydrolase TatD 0.67 AO353_27945 acetyl-CoA acetyltransferase low > 101
Enterobacter asburiae PDN3 0.35 EX28DRAFT_3587 Mg-dependent DNase 0.63 EX28DRAFT_1710 acetyl-CoA acetyltransferases — —
Pseudomonas stutzeri RCH2 0.34 Psest_0728 hydrolase, TatD family 0.63 Psest_1076 acetyl-CoA acetyltransferases low > 67
Escherichia coli ECRC62 0.34 BNILDI_08020 tatD metal-dependent hydrolase 0.63 BNILDI_10280 yqeF putative acetyl-CoA acetyltransferase low > 75
Escherichia coli Nissle 1917 0.34 ECOLIN_RS25130 metal-dependent hydrolase 0.63 ECOLIN_RS15960 acetyl-CoA C-acetyltransferase low > 55
Pseudomonas sp. RS175 0.34 PFR28_00103 putative metal-dependent hydrolase YjjV 0.67 PFR28_01323 Acetyl-CoA acetyltransferase low > 88
Escherichia coli ECOR27 0.34 NOLOHH_03580 yjjV metal-dependent hydrolase 0.63 NOLOHH_11800 yqeF putative acetyl-CoA acetyltransferase low > 75
Escherichia coli BW25113 0.34 b4378 yjjV predicted DNase (NCBI) 0.62 b2844 yqeF putative acyltransferase (VIMSS) low > 76
Escherichia fergusonii Becca 0.34 EFB2_04068 putative metal-dependent hydrolase YjjV 0.63 EFB2_01039 Acetyl-CoA acetyltransferase low > 86
Escherichia coli BL21 0.34 ECD_04254 putative DNase 0.63 ECD_02692 short chain acyltransferase low > 61
Escherichia coli ECOR38 0.34 HEPCGN_09265 tatD metal-dependent hydrolase 0.62 HEPCGN_19595 yqeF putative acetyl-CoA acetyltransferase low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_0819 TatD-related deoxyribonuclease 0.67 Psyr_0824 acetyl-CoA acetyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_0819 TatD-related deoxyribonuclease 0.67 Psyr_0824 acetyl-CoA acetyltransferase low > 86
Escherichia coli ECRC99 0.33 KEDOAH_16885 yjjV metal-dependent hydrolase 0.63 KEDOAH_08215 yqeF putative acetyl-CoA acetyltransferase — —
Escherichia coli ECRC98 0.33 JDDGAC_14855 yjjV metal-dependent hydrolase 0.63 JDDGAC_23580 yqeF putative acetyl-CoA acetyltransferase low > 86
Escherichia coli ECRC100 0.33 OKFHMN_11260 yjjV metal-dependent hydrolase 0.63 OKFHMN_19915 yqeF putative acetyl-CoA acetyltransferase low > 80
Escherichia coli ECRC102 0.33 NIAGMN_09110 yjjV metal-dependent hydrolase 0.63 NIAGMN_17685 yqeF putative acetyl-CoA acetyltransferase — —
Escherichia coli ECRC101 0.33 MCAODC_01775 yjjV metal-dependent hydrolase 0.63 MCAODC_10440 yqeF putative acetyl-CoA acetyltransferase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_03683 putative metal-dependent hydrolase YjjV 0.62 OHPLBJKB_00885 Acetyl-CoA acetyltransferase low > 73
Enterobacter sp. TBS_079 0.33 MPMX20_00677 putative metal-dependent hydrolase YjjV 0.63 MPMX20_03719 Acetyl-CoA acetyltransferase low > 85
Pseudomonas putida KT2440 0.32 PP_0791 putative hydrolase 0.67 PP_4636 acetyl-CoA acetyltransferase low > 96
Klebsiella michiganensis M5al 0.32 BWI76_RS04120 metal-dependent hydrolase 0.63 BWI76_RS23445 acetyl-CoA acetyltransferase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF1040 Putative deoxyribonuclease YjjV 0.62 GFF1330 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) low > 78
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_11925 TatD family deoxyribonuclease 0.51 CSW01_17645 acetyl-CoA C-acetyltransferase low > 62
Marinobacter adhaerens HP15 0.28 HP15_542 TatD-related deoxyribonuclease 0.67 HP15_2996 acetyl-CoA acetyltransferase low > 73

Not shown: 19 genomes with orthologs for HSERO_RS13935 only; 20 genomes with orthologs for HSERO_RS01180 only