Conservation of cofitness between HGI48_RS21430 and HGI48_RS04960 in Dickeya dianthicola 67-19

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS21430 F0F1 ATP synthase subunit epsilon 1.0 HGI48_RS04960 phosphoenolpyruvate--protein phosphotransferase 0.67 11
Dickeya dianthicola ME23 1.00 DZA65_RS22410 F0F1 ATP synthase subunit epsilon 1.00 DZA65_RS05300 phosphoenolpyruvate--protein phosphotransferase low > 75
Dickeya dadantii 3937 1.00 DDA3937_RS21555 F0F1 ATP synthase subunit epsilon 0.96 DDA3937_RS04950 phosphoenolpyruvate--protein phosphotransferase
Pectobacterium carotovorum WPP14 0.96 HER17_RS21650 F0F1 ATP synthase subunit epsilon 0.84 HER17_RS16580 phosphoenolpyruvate--protein phosphotransferase
Serratia liquefaciens MT49 0.92 IAI46_25160 F0F1 ATP synthase subunit epsilon 0.79 IAI46_20450 phosphoenolpyruvate--protein phosphotransferase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF1727 ATP synthase epsilon chain (EC 3.6.3.14) 0.75 GFF1311 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated
Klebsiella michiganensis M5al 0.91 BWI76_RS00180 F0F1 ATP synthase subunit epsilon 0.72 BWI76_RS23270 phosphoenolpyruvate--protein phosphotransferase PtsP low > 92
Escherichia coli ECRC98 0.91 JDDGAC_18455 atpC F0F1 ATP synthase subunit epsilon 0.74 JDDGAC_23670 ptsP phosphoenolpyruvate--protein phosphotransferase
Escherichia coli ECRC101 0.91 MCAODC_05340 atpC F0F1 ATP synthase subunit epsilon 0.74 MCAODC_10530 ptsP phosphoenolpyruvate--protein phosphotransferase
Escherichia coli ECRC62 0.91 BNILDI_04555 atpC F0F1 ATP synthase subunit epsilon 0.74 BNILDI_10370 ptsP phosphoenolpyruvate--protein phosphotransferase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.91 OHPLBJKB_04322 ATP synthase epsilon chain 0.74 OHPLBJKB_00901 Phosphoenolpyruvate-dependent phosphotransferase system
Escherichia fergusonii Becca 0.91 EFB2_04902 ATP synthase epsilon chain 0.74 EFB2_01055 Phosphoenolpyruvate-dependent phosphotransferase system low > 86
Escherichia coli BL21 0.91 ECD_03615 F1 sector of membrane-bound ATP synthase, epsilon subunit 0.74 ECD_02677 PEP-protein phosphotransferase enzyme I; GAF domain containing protein
Escherichia coli ECRC100 0.91 OKFHMN_14835 atpC F0F1 ATP synthase subunit epsilon 0.74 OKFHMN_20005 ptsP phosphoenolpyruvate--protein phosphotransferase low > 80
Escherichia coli ECRC99 0.91 KEDOAH_13315 atpC F0F1 ATP synthase subunit epsilon 0.74 KEDOAH_08125 ptsP phosphoenolpyruvate--protein phosphotransferase
Escherichia coli Nissle 1917 0.91 ECOLIN_RS25860 F0F1 ATP synthase subunit epsilon 0.74 ECOLIN_RS15875 phosphoenolpyruvate--protein phosphotransferase
Escherichia coli ECOR38 0.91 HEPCGN_13550 atpC F0F1 ATP synthase subunit epsilon 0.74 HEPCGN_19260 ptsP phosphoenolpyruvate--protein phosphotransferase low > 87
Escherichia coli ECOR27 0.91 NOLOHH_06970 atpC F0F1 ATP synthase subunit epsilon 0.74 NOLOHH_11890 ptsP phosphoenolpyruvate--protein phosphotransferase
Escherichia coli BW25113 0.91 b3731 atpC F0F1 ATP synthase subunit epsilon (NCBI) 0.74 b2829 ptsP fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI)
Rahnella sp. WP5 0.90 EX31_RS06090 F0F1 ATP synthase subunit epsilon 0.76 EX31_RS13200 phosphoenolpyruvate--protein phosphotransferase
Enterobacter asburiae PDN3 0.90 EX28DRAFT_4007 ATP synthase, F1 epsilon subunit (delta in mitochondria) 0.74 EX28DRAFT_2904 phosphoenolpyruvate-protein phosphotransferase
Enterobacter sp. TBS_079 0.90 MPMX20_04636 ATP synthase epsilon chain 0.74 MPMX20_03692 Phosphoenolpyruvate-dependent phosphotransferase system
Pantoea sp. MT58 0.90 IAI47_00250 F0F1 ATP synthase subunit epsilon 0.73 IAI47_03920 phosphoenolpyruvate--protein phosphotransferase
Escherichia coli ECRC102 0.90 NIAGMN_12590 atpC F0F1 ATP synthase subunit epsilon 0.74 NIAGMN_17775 ptsP phosphoenolpyruvate--protein phosphotransferase
Erwinia tracheiphila SCR3 0.87 LU632_RS24765 atpC F0F1 ATP synthase subunit epsilon 0.73 LU632_RS06110 ptsP phosphoenolpyruvate--protein phosphotransferase
Vibrio cholerae E7946 ATCC 55056 0.77 CSW01_13995 ATP synthase epsilon chain 0.48 CSW01_03525 phosphoenolpyruvate-protein phosphotransferase PtsP
Alteromonas macleodii MIT1002 0.65 MIT1002_04112 F-ATPase epsilon subunit 0.41 MIT1002_00648 Phosphoenolpyruvate-protein phosphotransferase
Shewanella amazonensis SB2B 0.63 Sama_3643 atpC F0F1 ATP synthase subunit epsilon (RefSeq) 0.42 Sama_0864 phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq)
Shewanella sp. ANA-3 0.61 Shewana3_4129 atpC F0F1 ATP synthase subunit epsilon (RefSeq) 0.41 Shewana3_3042 phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq)
Shewanella oneidensis MR-1 0.61 SO4746 atpC ATP synthase F1, epsilon subunit (NCBI ptt file) 0.41 SO1332 ptsP phosphoenolpyruvate-protein phosphotransferase PtsP (NCBI ptt file)
Shewanella loihica PV-4 0.57 Shew_3844 F0F1 ATP synthase subunit epsilon (RefSeq) 0.40 Shew_1039 phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq)
Marinobacter adhaerens HP15 0.55 HP15_3678 ATP synthase epsilon chain 0.40 HP15_463 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain protein
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_683 ATP synthase epsilon chain (EC 3.6.3.14) 0.38 PfGW456L13_953 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_1944 ATP synthase epsilon chain (EC 3.6.3.14) 0.38 Pf1N1B4_2284 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS30115 F0F1 ATP synthase subunit epsilon 0.39 PFLU_RS28645 phosphoenolpyruvate--protein phosphotransferase
Pseudomonas putida KT2440 0.47 PP_5412 ATP synthase epsilon chain 0.38 PP_5145 phosphoenolpyruvate-dependent regulator (with NPR and NTR proteins)
Pseudomonas sp. RS175 0.47 PFR28_04575 ATP synthase epsilon chain 0.38 PFR28_04830 Phosphoenolpyruvate-dependent phosphotransferase system
Pseudomonas fluorescens SBW25 0.47 PFLU_RS30115 F0F1 ATP synthase subunit epsilon 0.39 PFLU_RS28645 phosphoenolpyruvate--protein phosphotransferase
Pseudomonas simiae WCS417 0.46 PS417_28460 ATP synthase F0F1 subunit epsilon 0.39 PS417_26985 phosphoenolpyruvate-protein phosphotransferase
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_4214 ATP synthase epsilon chain (EC 3.6.3.14) 0.38 Pf6N2E2_3942 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_11725 ATP synthase F0F1 subunit epsilon 0.38 AO356_10350 phosphoenolpyruvate-protein phosphotransferase
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_5120 ATP synthase F1 subcomplex epsilon subunit 0.38 Psyr_4842 Phosphoenolpyruvate-protein phosphotransferase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_5120 ATP synthase F1 subcomplex epsilon subunit 0.38 Psyr_4842 Phosphoenolpyruvate-protein phosphotransferase
Pseudomonas fluorescens FW300-N2E3 0.45 AO353_10385 ATP synthase F0F1 subunit epsilon 0.38 AO353_08465 phosphoenolpyruvate-protein phosphotransferase
Pseudomonas stutzeri RCH2 0.45 Psest_4353 ATP synthase, F1 epsilon subunit (delta in mitochondria) 0.39 Psest_3862 phosphoenolpyruvate-protein phosphotransferase
Acinetobacter radioresistens SK82 0.44 MPMX26_00105 ATP synthase epsilon chain 0.36 MPMX26_00341 Phosphoenolpyruvate-dependent phosphotransferase system
Pseudomonas sp. S08-1 0.42 OH686_12720 ATP synthase F1, epsilon subunit 0.38 OH686_11430 Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated
Rhodopseudomonas palustris CGA009 0.27 TX73_000910 F0F1 ATP synthase subunit epsilon 0.25 TX73_003130 phosphoenolpyruvate--protein phosphotransferase low > 86
Azospirillum sp. SherDot2 0.25 MPMX19_02100 ATP synthase epsilon chain 0.24 MPMX19_02675 Phosphoenolpyruvate-dependent phosphotransferase system
Azospirillum brasilense Sp245 0.25 AZOBR_RS04015 ATP synthase subunit epsilon 0.25 AZOBR_RS18900 peptidase
Rhodospirillum rubrum S1H 0.23 Rru_A1227 H+-transporting two-sector ATPase, delta/epsilon subunit (NCBI) 0.23 Rru_A0745 PTSINtr with GAF domain, PtsP (NCBI)
Magnetospirillum magneticum AMB-1 0.21 AMB_RS20930 ATP synthase epsilon chain 0.24 AMB_RS08150 phosphoenolpyruvate--protein phosphotransferase
Phaeobacter inhibens DSM 17395 0.21 PGA1_c25080 ATP synthase epsilon chain 0.21 PGA1_c23500 phosphoenolpyruvate-protein phosphotransferase PtsP
Dinoroseobacter shibae DFL-12 0.20 Dshi_2933 ATP synthase F1, epsilon subunit (RefSeq) 0.21 Dshi_2062 PTSINtr with GAF domain, PtsP (RefSeq)

Not shown: 26 genomes with orthologs for HGI48_RS21430 only; 8 genomes with orthologs for HGI48_RS04960 only