Conservation of cofitness between HER17_RS15875 and HER17_RS21605 in Pectobacterium carotovorum WPP14

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS15875 cytochrome o ubiquinol oxidase subunit II 1.0 HER17_RS21605 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.75 12
Dickeya dadantii 3937 0.82 DDA3937_RS05615 cytochrome o ubiquinol oxidase subunit II 0.80 DDA3937_RS21600 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 74
Dickeya dianthicola 67-19 0.82 HGI48_RS05660 cytochrome o ubiquinol oxidase subunit II 0.80 HGI48_RS21385 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS05985 cytochrome o ubiquinol oxidase subunit II 0.79 DZA65_RS22365 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 75
Escherichia coli ECOR27 0.68 NOLOHH_01295 cyoA cytochrome o ubiquinol oxidase subunit II 0.76 NOLOHH_06925 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 75
Escherichia coli ECRC62 0.68 BNILDI_22710 cyoA cytochrome o ubiquinol oxidase subunit II 0.76 BNILDI_04600 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_03241 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.76 OHPLBJKB_04313 Ribosomal RNA small subunit methyltransferase G low > 73
Escherichia coli BL21 0.68 ECD_00383 cytochrome o ubiquinol oxidase subunit II 0.76 ECD_03624 16S rRNA m(7)G527 methyltransferase, SAM-dependent; glucose-inhibited cell-division protein low > 61
Escherichia coli BW25113 0.68 b0432 cyoA cytochrome o ubiquinol oxidase subunit II (NCBI) 0.76 b3740 gidB glucose-inhibited division protein B (NCBI) low > 76
Escherichia coli ECOR38 0.68 HEPCGN_06975 cyoA cytochrome o ubiquinol oxidase subunit II 0.76 HEPCGN_13505 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 87
Escherichia coli Nissle 1917 0.68 ECOLIN_RS02595 cytochrome o ubiquinol oxidase subunit II 0.76 ECOLIN_RS21510 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 55
Escherichia fergusonii Becca 0.67 EFB2_03625 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.76 EFB2_04893 Ribosomal RNA small subunit methyltransferase G low > 86
Enterobacter sp. TBS_079 0.67 MPMX20_01023 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.78 MPMX20_04627 Ribosomal RNA small subunit methyltransferase G low > 85
Klebsiella michiganensis M5al 0.67 BWI76_RS06495 cytochrome ubiquinol oxidase subunit II 0.77 BWI76_RS00225 16S rRNA methyltransferase G low > 92
Escherichia coli ECRC99 0.67 KEDOAH_19605 cyoA cytochrome o ubiquinol oxidase subunit II 0.76 KEDOAH_13360 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Escherichia coli ECRC101 0.67 MCAODC_27585 cyoA cytochrome o ubiquinol oxidase subunit II 0.76 MCAODC_05295 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 87
Escherichia coli ECRC98 0.67 JDDGAC_12015 cyoA cytochrome o ubiquinol oxidase subunit II 0.76 JDDGAC_18410 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.87 40
Escherichia coli ECRC102 0.67 NIAGMN_06415 cyoA cytochrome o ubiquinol oxidase subunit II 0.76 NIAGMN_12545 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Escherichia coli ECRC100 0.67 OKFHMN_08360 cyoA cytochrome o ubiquinol oxidase subunit II 0.76 OKFHMN_14790 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.67 64
Enterobacter asburiae PDN3 0.66 EX28DRAFT_2539 cytochrome o ubiquinol oxidase subunit II 0.78 EX28DRAFT_4016 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 76
Pantoea sp. MT58 0.66 IAI47_14680 cytochrome o ubiquinol oxidase subunit II 0.76 IAI47_00295 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 76
Serratia liquefaciens MT49 0.66 IAI46_04985 cytochrome o ubiquinol oxidase subunit II 0.81 IAI46_25115 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF4346 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.75 GFF1717 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB low > 78
Erwinia tracheiphila SCR3 0.65 LU632_RS18375 cyoA cytochrome o ubiquinol oxidase subunit II 0.72 LU632_RS24810 rsmG 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Rahnella sp. WP5 0.65 EX31_RS22220 cytochrome o ubiquinol oxidase subunit II 0.77 EX31_RS06135 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 89
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 0.47 Psyr_5131 16S rRNA m(7)G-527 methyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 0.47 Psyr_5131 16S rRNA m(7)G-527 methyltransferase — —
Pseudomonas putida KT2440 0.56 PP_0812 cytochrome bo terminal oxidase subunit II 0.44 PP_0003 16S RNA methyltransferase — —
Ralstonia solanacearum UW163 0.54 UW163_RS06965 ubiquinol oxidase subunit II 0.38 UW163_RS04750 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS06660 ubiquinol oxidase subunit II 0.38 RALBFv3_RS08860 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG — —
Ralstonia solanacearum PSI07 0.54 RPSI07_RS10565 ubiquinol oxidase subunit II 0.38 RPSI07_RS08415 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 81
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS02335 ubiquinol oxidase subunit II 0.37 ABZR87_RS04120 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 80
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_4936 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.47 PfGW456L13_672 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB low > 87
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS24915 ubiquinol oxidase subunit II 0.39 BPHYT_RS19435 16S rRNA methyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS25220 ubiquinol oxidase subunit II 0.45 PFLU_RS30170 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 109
Pseudomonas fluorescens SBW25 0.53 PFLU_RS25220 ubiquinol oxidase subunit II 0.45 PFLU_RS30170 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 109
Pseudomonas simiae WCS417 0.53 PS417_23390 ubiquinol oxidase subunit II 0.44 PS417_28515 16S rRNA methyltransferase low > 88
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_16960 ubiquinol oxidase subunit II 0.46 AO356_11670 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 104
Pseudomonas sp. RS175 0.53 PFR28_00242 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.47 PFR28_04586 Ribosomal RNA small subunit methyltransferase G low > 88
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_5317 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.46 Pf6N2E2_4204 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB low > 103
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_15450 ubiquinol oxidase subunit II 0.47 AO353_10440 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 101
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS15340 ubiquinol oxidase subunit II 0.40 QEN71_RS29340 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG low > 153
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_973 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.47 Pf1N1B4_1935 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB — —
Alteromonas macleodii MIT1002 0.52 MIT1002_03929 Ubiquinol oxidase subunit 2 precursor 0.57 MIT1002_04123 Ribosomal RNA small subunit methyltransferase G low > 70
Shewanella loihica PV-4 0.51 Shew_0366 ubiquinol oxidase, subunit II (RefSeq) 0.60 Shew_3855 gidB glucose-inhibited division protein B (RefSeq) low > 60
Ralstonia solanacearum GMI1000 0.51 RS_RS14610 ubiquinol oxidase subunit II 0.37 RS_RS16670 ribosomal RNA small subunit methyltransferase G — —
Paraburkholderia graminis OAS925 0.49 ABIE53_005340 cytochrome o ubiquinol oxidase subunit 2 0.39 ABIE53_000263 16S rRNA (guanine527-N7)-methyltransferase low > 113
Shewanella sp. ANA-3 0.49 Shewana3_4031 ubiquinol oxidase, subunit II (RefSeq) 0.59 Shewana3_0001 gidB 16S rRNA methyltransferase GidB (RefSeq) low > 73
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_03426 cytochrome bo3 quinol oxidase subunit 2 (EC 1.10.3.-) 0.40 H281DRAFT_02386 16S rRNA m(7)G-527 methyltransferase (EC 2.1.1.170) low > 103
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS32600 cytochrome O ubiquinol oxidase subunit II 0.33 RR42_RS20210 16S rRNA methyltransferase low > 128
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS07625 ubiquinol oxidase subunit II 0.42 ABZR86_RS14875 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 0.34 73
Caulobacter crescentus NA1000 Δfur 0.45 CCNA_01851 quinol cytochrome oxidase polypeptide II 0.16 CCNA_03870 methyltransferase GidB low > 67
Caulobacter crescentus NA1000 0.45 CCNA_01851 quinol cytochrome oxidase polypeptide II 0.16 CCNA_03870 methyltransferase GidB low > 66
Variovorax sp. SCN45 0.45 GFF5678 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.36 GFF3337 16S rRNA (guanine(527)-N(7))-methyltransferase (EC 2.1.1.170) low > 127
Acinetobacter radioresistens SK82 0.42 MPMX26_01162 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.38 MPMX26_01214 Ribosomal RNA small subunit methyltransferase G low > 36
Acidovorax sp. GW101-3H11 0.42 Ac3H11_3141 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.39 Ac3H11_4955 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB low > 79

Not shown: 2 genomes with orthologs for HER17_RS15875 only; 18 genomes with orthologs for HER17_RS21605 only