Conservation of cofitness between HER17_RS04200 and HER17_RS20305 in Pectobacterium carotovorum WPP14

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS04200 7-carboxy-7-deazaguanine synthase QueE 1.0 HER17_RS20305 amino acid ABC transporter ATP-binding protein 0.68 6
Dickeya dadantii 3937 0.86 DDA3937_RS16970 7-carboxy-7-deazaguanine synthase QueE 0.95 DDA3937_RS01255 amino acid ABC transporter ATP-binding protein low > 74
Escherichia coli ECRC62 0.85 BNILDI_10675 queE 7-carboxy-7-deazaguanine synthase QueE 0.90 BNILDI_02110 yhdZ Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ low > 75
Escherichia coli ECRC102 0.85 NIAGMN_18070 queE 7-carboxy-7-deazaguanine synthase QueE 0.90 NIAGMN_15380 yhdZ Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ
Escherichia coli ECRC101 0.85 MCAODC_10825 queE 7-carboxy-7-deazaguanine synthase QueE 0.90 MCAODC_08140 yhdZ Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ low > 87
Escherichia coli BL21 0.85 ECD_02622 7-carboxy-7-deazaguanine synthase; queosine biosynthesis 0.90 ECD_03129 putative amino acid ABC transporter ATPase low > 61
Escherichia coli ECRC100 0.85 OKFHMN_20300 queE 7-carboxy-7-deazaguanine synthase QueE 0.90 OKFHMN_17620 yhdZ Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ low > 80
Escherichia coli BW25113 0.85 b2777 ygcF hypothetical protein (NCBI) 0.90 b3271 yhdZ predicted amino-acid transporter subunit (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_00957 7-carboxy-7-deazaguanine synthase 0.90 OHPLBJKB_00432 Glutamine transport ATP-binding protein GlnQ low > 73
Escherichia coli ECRC99 0.85 KEDOAH_07830 queE 7-carboxy-7-deazaguanine synthase QueE 0.90 KEDOAH_10530 yhdZ Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ
Escherichia coli ECRC98 0.85 JDDGAC_23965 queE 7-carboxy-7-deazaguanine synthase QueE 0.90 JDDGAC_21240 yhdZ Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ low > 86
Escherichia coli ECOR27 0.85 NOLOHH_12170 queE 7-carboxy-7-deazaguanine synthase QueE 0.90 NOLOHH_09410 yhdZ Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ low > 75
Escherichia fergusonii Becca 0.85 EFB2_01141 7-carboxy-7-deazaguanine synthase 0.90 EFB2_00552 Glutamine transport ATP-binding protein GlnQ low > 86
Escherichia coli Nissle 1917 0.85 ECOLIN_RS15475 7-carboxy-7-deazaguanine synthase QueE 0.89 ECOLIN_RS18790 amino acid ABC transporter ATP-binding protein low > 55
Escherichia coli ECOR38 0.85 HEPCGN_19205 queE 7-carboxy-7-deazaguanine synthase QueE 0.89 HEPCGN_16440 ABC transporter ATP-binding protein low > 87
Enterobacter sp. TBS_079 0.84 MPMX20_03645 7-carboxy-7-deazaguanine synthase 0.91 MPMX20_04180 Glutamine transport ATP-binding protein GlnQ low > 85
Enterobacter asburiae PDN3 0.84 EX28DRAFT_2855 putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 0.91 EX28DRAFT_3324 ABC-type polar amino acid transport system, ATPase component low > 76
Erwinia tracheiphila SCR3 0.84 LU632_RS06390 queE 7-carboxy-7-deazaguanine synthase QueE 0.90 LU632_RS19785 amino acid ABC transporter ATP-binding protein 0.61 6
Rahnella sp. WP5 0.83 EX31_RS07920 7-carboxy-7-deazaguanine synthase QueE 0.90 EX31_RS12140 amino acid ABC transporter ATP-binding protein low > 89
Pantoea sp. MT58 0.80 IAI47_04140 7-carboxy-7-deazaguanine synthase QueE 0.91 IAI47_02360 amino acid ABC transporter ATP-binding protein 0.45 42
Dickeya dianthicola 67-19 0.79 HGI48_RS17035 7-carboxy-7-deazaguanine synthase QueE 0.95 HGI48_RS01240 amino acid ABC transporter ATP-binding protein low > 71
Dickeya dianthicola ME23 0.79 DZA65_RS18110 7-carboxy-7-deazaguanine synthase QueE 0.95 DZA65_RS01285 amino acid ABC transporter ATP-binding protein low > 75
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_06870 7-carboxy-7-deazaguanine synthase QueE 0.77 CSW01_06840 amino acid ABC transporter ATP-binding protein 0.39 26
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS41925 7-carboxy-7-deazaguanine synthase QueE 0.71 QEN71_RS40280 amino acid ABC transporter ATP-binding protein
Synechococcus elongatus PCC 7942 0.23 Synpcc7942_1332 hypothetical protein 0.63 Synpcc7942_0249 bgtA ATPase low > 38
Rhodospirillum rubrum S1H 0.19 Rru_A1959 Radical SAM (NCBI) 0.79 Rru_A1001 ABC transporter component (NCBI) low > 58
Ralstonia sp. UNC404CL21Col 0.19 ABZR87_RS12145 7-carboxy-7-deazaguanine synthase 0.61 ABZR87_RS15830 amino acid ABC transporter ATP-binding protein low > 80
Azospirillum brasilense Sp245 0.19 AZOBR_RS04155 radical SAM protein 0.80 AZOBR_RS08670 arginine ABC transporter ATP-binding protein low > 97
Cupriavidus basilensis FW507-4G11 0.18 RR42_RS11390 7-cyano-7-deazaguanine reductase 0.71 RR42_RS16370 glutamine ABC transporter ATP-binding protein
Rhodopseudomonas palustris CGA009 0.18 TX73_006110 7-carboxy-7-deazaguanine synthase 0.72 TX73_013255 amino acid ABC transporter ATP-binding protein low > 86
Pseudomonas simiae WCS417 0.18 PS417_22405 7-carboxy-7-deazaguanine synthase 0.86 PS417_04915 glutamine ABC transporter ATP-binding protein low > 88
Pseudomonas fluorescens SBW25-INTG 0.18 PFLU_RS24045 7-carboxy-7-deazaguanine synthase QueE 0.86 PFLU_RS04975 amino acid ABC transporter ATP-binding protein low > 109
Pseudomonas fluorescens SBW25 0.18 PFLU_RS24045 7-carboxy-7-deazaguanine synthase QueE 0.86 PFLU_RS04975 amino acid ABC transporter ATP-binding protein low > 109
Ralstonia solanacearum GMI1000 0.17 RS_RS07295 7-carboxy-7-deazaguanine synthase 0.61 RS_RS11345 amino acid ABC transporter ATP-binding protein
Ralstonia solanacearum UW163 0.17 UW163_RS13945 7-carboxy-7-deazaguanine synthase 0.60 UW163_RS09770 amino acid ABC transporter ATP-binding protein
Ralstonia solanacearum PSI07 0.17 RPSI07_RS16890 7-carboxy-7-deazaguanine synthase 0.61 RPSI07_RS13330 amino acid ABC transporter ATP-binding protein
Pseudomonas sp. RS175 0.17 PFR28_03404 7-carboxy-7-deazaguanine synthase 0.85 PFR28_03539 Glutamine transport ATP-binding protein GlnQ low > 88
Ralstonia solanacearum IBSBF1503 0.17 RALBFv3_RS00615 7-carboxy-7-deazaguanine synthase 0.60 RALBFv3_RS03900 amino acid ABC transporter ATP-binding protein
Pseudomonas fluorescens FW300-N2C3 0.17 AO356_18065 7-carboxy-7-deazaguanine synthase 0.85 AO356_17395 glutamine ABC transporter ATP-binding protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.17 Pf6N2E2_5545 Queuosine Biosynthesis QueE Radical SAM 0.85 Pf6N2E2_5405 ABC transporter for D-Alanine, ATPase component (from data) low > 103
Pseudomonas fluorescens FW300-N1B4 0.17 Pf1N1B4_629 Queuosine Biosynthesis QueE Radical SAM 0.86 Pf1N1B4_914 ABC-type polar amino acid transport system, ATPase component low > 87
Desulfovibrio vulgaris Hildenborough JW710 0.17 DVU2658 conserved hypothetical protein (TIGR) 0.65 DVU0753 amino acid ABC transporter, ATP-binding protein (TIGR) low > 55
Variovorax sp. SCN45 0.17 GFF2577 7-carboxy-7-deazaguanine synthase (EC 4.3.99.3) 0.75 GFF4213 ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines)
Desulfovibrio vulgaris Miyazaki F 0.17 DvMF_1124 radical SAM domain protein (RefSeq) 0.65 DvMF_2788 ABC transporter related (RefSeq) low > 51
Pseudomonas fluorescens FW300-N2E3 0.17 AO353_03540 7-carboxy-7-deazaguanine synthase 0.86 AO353_04600 glutamine ABC transporter ATP-binding protein low > 101
Pseudomonas sp. S08-1 0.17 OH686_19175 7-carboxy-7-deazaguanine synthase 0.85 OH686_17820 Amino acid ABC transporter, ATP-binding protein YhdZ low > 80
Variovorax sp. OAS795 0.16 ABID97_RS07425 7-carboxy-7-deazaguanine synthase 0.74 ABID97_RS13305 amino acid ABC transporter ATP-binding protein
Pseudomonas putida KT2440 0.16 PP_1225 7-carboxy-7-deazaguanine synthase 0.86 PP_1300 putative amino acid ABC transporter - ATP-binding subunit low > 96
Pseudomonas fluorescens GW456-L13 0.16 PfGW456L13_1861 Queuosine Biosynthesis QueE Radical SAM 0.86 PfGW456L13_1701 ABC-type polar amino acid transport system, ATPase component low > 87
Pseudomonas stutzeri RCH2 0.15 Psest_1505 Organic radical activating enzymes 0.84 Psest_3160 ABC-type polar amino acid transport system, ATPase component
Hydrogenophaga sp. GW460-11-11-14-LB1 0.15 GFF4633 Queuosine Biosynthesis QueE Radical SAM 0.71 GFF1640 amino acid ABC transporter, ATP-binding protein
Pseudomonas syringae pv. syringae B728a 0.15 Psyr_1418 Radical SAM 0.85 Psyr_1075 amino acid ABC transporter ATP-binding protein, PAAT family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.15 Psyr_1418 Radical SAM 0.85 Psyr_1075 amino acid ABC transporter ATP-binding protein, PAAT family
Marinobacter adhaerens HP15 0.15 HP15_3815 organic radical activating enzyme 0.78 HP15_2193 amino-acid ABC transporter ATP-binding protein-like protein low > 73

Not shown: 30 genomes with orthologs for HER17_RS04200 only; 10 genomes with orthologs for HER17_RS20305 only