Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS04200 | | 7-carboxy-7-deazaguanine synthase QueE | 1.0 | HER17_RS20305 | | amino acid ABC transporter ATP-binding protein | 0.68 | 6 |
Dickeya dadantii 3937 | 0.86 | DDA3937_RS16970 | | 7-carboxy-7-deazaguanine synthase QueE | 0.95 | DDA3937_RS01255 | | amino acid ABC transporter ATP-binding protein | low | > 74 |
Escherichia coli ECRC62 | 0.85 | BNILDI_10675 | queE | 7-carboxy-7-deazaguanine synthase QueE | 0.90 | BNILDI_02110 | yhdZ | Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ | low | > 75 |
Escherichia coli ECRC102 | 0.85 | NIAGMN_18070 | queE | 7-carboxy-7-deazaguanine synthase QueE | 0.90 | NIAGMN_15380 | yhdZ | Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ | — | — |
Escherichia coli ECRC101 | 0.85 | MCAODC_10825 | queE | 7-carboxy-7-deazaguanine synthase QueE | 0.90 | MCAODC_08140 | yhdZ | Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ | low | > 87 |
Escherichia coli BL21 | 0.85 | ECD_02622 | | 7-carboxy-7-deazaguanine synthase; queosine biosynthesis | 0.90 | ECD_03129 | | putative amino acid ABC transporter ATPase | low | > 61 |
Escherichia coli ECRC100 | 0.85 | OKFHMN_20300 | queE | 7-carboxy-7-deazaguanine synthase QueE | 0.90 | OKFHMN_17620 | yhdZ | Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ | low | > 80 |
Escherichia coli BW25113 | 0.85 | b2777 | ygcF | hypothetical protein (NCBI) | 0.90 | b3271 | yhdZ | predicted amino-acid transporter subunit (NCBI) | low | > 76 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.85 | OHPLBJKB_00957 | | 7-carboxy-7-deazaguanine synthase | 0.90 | OHPLBJKB_00432 | | Glutamine transport ATP-binding protein GlnQ | low | > 73 |
Escherichia coli ECRC99 | 0.85 | KEDOAH_07830 | queE | 7-carboxy-7-deazaguanine synthase QueE | 0.90 | KEDOAH_10530 | yhdZ | Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ | — | — |
Escherichia coli ECRC98 | 0.85 | JDDGAC_23965 | queE | 7-carboxy-7-deazaguanine synthase QueE | 0.90 | JDDGAC_21240 | yhdZ | Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ | low | > 86 |
Escherichia coli ECOR27 | 0.85 | NOLOHH_12170 | queE | 7-carboxy-7-deazaguanine synthase QueE | 0.90 | NOLOHH_09410 | yhdZ | Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ | low | > 75 |
Escherichia fergusonii Becca | 0.85 | EFB2_01141 | | 7-carboxy-7-deazaguanine synthase | 0.90 | EFB2_00552 | | Glutamine transport ATP-binding protein GlnQ | low | > 86 |
Escherichia coli Nissle 1917 | 0.85 | ECOLIN_RS15475 | | 7-carboxy-7-deazaguanine synthase QueE | 0.89 | ECOLIN_RS18790 | | amino acid ABC transporter ATP-binding protein | low | > 55 |
Escherichia coli ECOR38 | 0.85 | HEPCGN_19205 | queE | 7-carboxy-7-deazaguanine synthase QueE | 0.89 | HEPCGN_16440 | | ABC transporter ATP-binding protein | low | > 87 |
Enterobacter sp. TBS_079 | 0.84 | MPMX20_03645 | | 7-carboxy-7-deazaguanine synthase | 0.91 | MPMX20_04180 | | Glutamine transport ATP-binding protein GlnQ | low | > 85 |
Enterobacter asburiae PDN3 | 0.84 | EX28DRAFT_2855 | | putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE | 0.91 | EX28DRAFT_3324 | | ABC-type polar amino acid transport system, ATPase component | low | > 76 |
Erwinia tracheiphila SCR3 | 0.84 | LU632_RS06390 | queE | 7-carboxy-7-deazaguanine synthase QueE | 0.90 | LU632_RS19785 | | amino acid ABC transporter ATP-binding protein | 0.61 | 6 |
Rahnella sp. WP5 | 0.83 | EX31_RS07920 | | 7-carboxy-7-deazaguanine synthase QueE | 0.90 | EX31_RS12140 | | amino acid ABC transporter ATP-binding protein | low | > 89 |
Pantoea sp. MT58 | 0.80 | IAI47_04140 | | 7-carboxy-7-deazaguanine synthase QueE | 0.91 | IAI47_02360 | | amino acid ABC transporter ATP-binding protein | 0.45 | 42 |
Dickeya dianthicola 67-19 | 0.79 | HGI48_RS17035 | | 7-carboxy-7-deazaguanine synthase QueE | 0.95 | HGI48_RS01240 | | amino acid ABC transporter ATP-binding protein | low | > 71 |
Dickeya dianthicola ME23 | 0.79 | DZA65_RS18110 | | 7-carboxy-7-deazaguanine synthase QueE | 0.95 | DZA65_RS01285 | | amino acid ABC transporter ATP-binding protein | low | > 75 |
Vibrio cholerae E7946 ATCC 55056 | 0.64 | CSW01_06870 | | 7-carboxy-7-deazaguanine synthase QueE | 0.77 | CSW01_06840 | | amino acid ABC transporter ATP-binding protein | 0.39 | 26 |
Paraburkholderia sabiae LMG 24235 | 0.45 | QEN71_RS41925 | | 7-carboxy-7-deazaguanine synthase QueE | 0.71 | QEN71_RS40280 | | amino acid ABC transporter ATP-binding protein | — | — |
Synechococcus elongatus PCC 7942 | 0.23 | Synpcc7942_1332 | | hypothetical protein | 0.63 | Synpcc7942_0249 | bgtA | ATPase | low | > 38 |
Rhodospirillum rubrum S1H | 0.19 | Rru_A1959 | | Radical SAM (NCBI) | 0.79 | Rru_A1001 | | ABC transporter component (NCBI) | low | > 58 |
Ralstonia sp. UNC404CL21Col | 0.19 | ABZR87_RS12145 | | 7-carboxy-7-deazaguanine synthase | 0.61 | ABZR87_RS15830 | | amino acid ABC transporter ATP-binding protein | low | > 80 |
Azospirillum brasilense Sp245 | 0.19 | AZOBR_RS04155 | | radical SAM protein | 0.80 | AZOBR_RS08670 | | arginine ABC transporter ATP-binding protein | low | > 97 |
Cupriavidus basilensis FW507-4G11 | 0.18 | RR42_RS11390 | | 7-cyano-7-deazaguanine reductase | 0.71 | RR42_RS16370 | | glutamine ABC transporter ATP-binding protein | — | — |
Rhodopseudomonas palustris CGA009 | 0.18 | TX73_006110 | | 7-carboxy-7-deazaguanine synthase | 0.72 | TX73_013255 | | amino acid ABC transporter ATP-binding protein | low | > 86 |
Pseudomonas simiae WCS417 | 0.18 | PS417_22405 | | 7-carboxy-7-deazaguanine synthase | 0.86 | PS417_04915 | | glutamine ABC transporter ATP-binding protein | low | > 88 |
Pseudomonas fluorescens SBW25-INTG | 0.18 | PFLU_RS24045 | | 7-carboxy-7-deazaguanine synthase QueE | 0.86 | PFLU_RS04975 | | amino acid ABC transporter ATP-binding protein | low | > 109 |
Pseudomonas fluorescens SBW25 | 0.18 | PFLU_RS24045 | | 7-carboxy-7-deazaguanine synthase QueE | 0.86 | PFLU_RS04975 | | amino acid ABC transporter ATP-binding protein | low | > 109 |
Ralstonia solanacearum GMI1000 | 0.17 | RS_RS07295 | | 7-carboxy-7-deazaguanine synthase | 0.61 | RS_RS11345 | | amino acid ABC transporter ATP-binding protein | — | — |
Ralstonia solanacearum UW163 | 0.17 | UW163_RS13945 | | 7-carboxy-7-deazaguanine synthase | 0.60 | UW163_RS09770 | | amino acid ABC transporter ATP-binding protein | — | — |
Ralstonia solanacearum PSI07 | 0.17 | RPSI07_RS16890 | | 7-carboxy-7-deazaguanine synthase | 0.61 | RPSI07_RS13330 | | amino acid ABC transporter ATP-binding protein | — | — |
Pseudomonas sp. RS175 | 0.17 | PFR28_03404 | | 7-carboxy-7-deazaguanine synthase | 0.85 | PFR28_03539 | | Glutamine transport ATP-binding protein GlnQ | low | > 88 |
Ralstonia solanacearum IBSBF1503 | 0.17 | RALBFv3_RS00615 | | 7-carboxy-7-deazaguanine synthase | 0.60 | RALBFv3_RS03900 | | amino acid ABC transporter ATP-binding protein | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.17 | AO356_18065 | | 7-carboxy-7-deazaguanine synthase | 0.85 | AO356_17395 | | glutamine ABC transporter ATP-binding protein | low | > 104 |
Pseudomonas fluorescens FW300-N2E2 | 0.17 | Pf6N2E2_5545 | | Queuosine Biosynthesis QueE Radical SAM | 0.85 | Pf6N2E2_5405 | | ABC transporter for D-Alanine, ATPase component (from data) | low | > 103 |
Pseudomonas fluorescens FW300-N1B4 | 0.17 | Pf1N1B4_629 | | Queuosine Biosynthesis QueE Radical SAM | 0.86 | Pf1N1B4_914 | | ABC-type polar amino acid transport system, ATPase component | low | > 87 |
Desulfovibrio vulgaris Hildenborough JW710 | 0.17 | DVU2658 | | conserved hypothetical protein (TIGR) | 0.65 | DVU0753 | | amino acid ABC transporter, ATP-binding protein (TIGR) | low | > 55 |
Variovorax sp. SCN45 | 0.17 | GFF2577 | | 7-carboxy-7-deazaguanine synthase (EC 4.3.99.3) | 0.75 | GFF4213 | | ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) | — | — |
Desulfovibrio vulgaris Miyazaki F | 0.17 | DvMF_1124 | | radical SAM domain protein (RefSeq) | 0.65 | DvMF_2788 | | ABC transporter related (RefSeq) | low | > 51 |
Pseudomonas fluorescens FW300-N2E3 | 0.17 | AO353_03540 | | 7-carboxy-7-deazaguanine synthase | 0.86 | AO353_04600 | | glutamine ABC transporter ATP-binding protein | low | > 101 |
Pseudomonas sp. S08-1 | 0.17 | OH686_19175 | | 7-carboxy-7-deazaguanine synthase | 0.85 | OH686_17820 | | Amino acid ABC transporter, ATP-binding protein YhdZ | low | > 80 |
Variovorax sp. OAS795 | 0.16 | ABID97_RS07425 | | 7-carboxy-7-deazaguanine synthase | 0.74 | ABID97_RS13305 | | amino acid ABC transporter ATP-binding protein | — | — |
Pseudomonas putida KT2440 | 0.16 | PP_1225 | | 7-carboxy-7-deazaguanine synthase | 0.86 | PP_1300 | | putative amino acid ABC transporter - ATP-binding subunit | low | > 96 |
Pseudomonas fluorescens GW456-L13 | 0.16 | PfGW456L13_1861 | | Queuosine Biosynthesis QueE Radical SAM | 0.86 | PfGW456L13_1701 | | ABC-type polar amino acid transport system, ATPase component | low | > 87 |
Pseudomonas stutzeri RCH2 | 0.15 | Psest_1505 | | Organic radical activating enzymes | 0.84 | Psest_3160 | | ABC-type polar amino acid transport system, ATPase component | — | — |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.15 | GFF4633 | | Queuosine Biosynthesis QueE Radical SAM | 0.71 | GFF1640 | | amino acid ABC transporter, ATP-binding protein | — | — |
Pseudomonas syringae pv. syringae B728a | 0.15 | Psyr_1418 | | Radical SAM | 0.85 | Psyr_1075 | | amino acid ABC transporter ATP-binding protein, PAAT family | low | > 86 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.15 | Psyr_1418 | | Radical SAM | 0.85 | Psyr_1075 | | amino acid ABC transporter ATP-binding protein, PAAT family | — | — |
Marinobacter adhaerens HP15 | 0.15 | HP15_3815 | | organic radical activating enzyme | 0.78 | HP15_2193 | | amino-acid ABC transporter ATP-binding protein-like protein | low | > 73 |
Not shown: 30 genomes with orthologs for HER17_RS04200 only; 10 genomes with orthologs for HER17_RS20305 only