Conservation of cofitness between HER17_RS12035 and HER17_RS18850 in Pectobacterium carotovorum WPP14

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12035 MBL fold metallo-hydrolase 1.0 HER17_RS18850 protein-disulfide reductase DsbD 0.62 6
Serratia liquefaciens MT49 0.81 IAI46_08745 MBL fold metallo-hydrolase 0.65 IAI46_01465 protein-disulfide reductase DsbD low > 86
Dickeya dadantii 3937 0.78 DDA3937_RS12920 MBL fold metallo-hydrolase 0.64 DDA3937_RS02705 protein-disulfide reductase DsbD low > 74
Dickeya dianthicola ME23 0.78 DZA65_RS13455 MBL fold metallo-hydrolase 0.62 DZA65_RS02835 protein-disulfide reductase DsbD low > 75
Dickeya dianthicola 67-19 0.78 HGI48_RS12995 MBL fold metallo-hydrolase 0.62 HGI48_RS02680 protein-disulfide reductase DsbD low > 71
Enterobacter asburiae PDN3 0.77 EX28DRAFT_2009 Zn-dependent hydrolases, including glyoxylases 0.62 EX28DRAFT_3333 Thiol:disulfide interchange protein low > 76
Enterobacter sp. TBS_079 0.77 MPMX20_01585 Hydroxyacylglutathione hydrolase GloC 0.61 MPMX20_00416 Thiol:disulfide interchange protein DsbD low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.77 OHPLBJKB_02740 Hydroxyacylglutathione hydrolase GloC 0.64 OHPLBJKB_03907 Thiol:disulfide interchange protein DsbD low > 73
Escherichia coli ECRC62 0.77 BNILDI_20205 gloC hydroxyacylglutathione hydrolase GloC 0.64 BNILDI_06775 dsbD protein-disulfide reductase DsbD low > 75
Escherichia coli ECOR27 0.77 NOLOHH_21950 gloC hydroxyacylglutathione hydrolase GloC 0.64 NOLOHH_04715 dsbD protein-disulfide reductase DsbD low > 75
Escherichia coli BL21 0.76 ECD_00931 putative metal-binding enzyme 0.64 ECD_04006 thiol:disulfide interchange protein and activator of DsbC low > 61
Escherichia coli ECOR38 0.76 HEPCGN_23135 gloC hydroxyacylglutathione hydrolase GloC 0.64 HEPCGN_10675 dsbD protein-disulfide reductase DsbD low > 87
Escherichia coli BW25113 0.76 b0927 ycbL predicted metal-binding enzyme (NCBI) 0.64 b4136 dipZ thiol:disulfide interchange protein precursor (NCBI) low > 76
Escherichia coli ECRC100 0.76 OKFHMN_05390 gloC hydroxyacylglutathione hydrolase GloC 0.64 OKFHMN_12450 dsbD protein-disulfide reductase DsbD low > 80
Escherichia coli Nissle 1917 0.76 ECOLIN_RS04905 hydroxyacylglutathione hydrolase GloC 0.64 ECOLIN_RS24030 protein-disulfide reductase DsbD low > 55
Escherichia coli ECRC98 0.76 JDDGAC_09000 gloC hydroxyacylglutathione hydrolase GloC 0.64 JDDGAC_16085 dsbD protein-disulfide reductase DsbD low > 86
Escherichia coli ECRC102 0.76 NIAGMN_03110 gloC hydroxyacylglutathione hydrolase GloC 0.64 NIAGMN_10295 dsbD protein-disulfide reductase DsbD
Escherichia fergusonii Becca 0.76 EFB2_03137 Hydroxyacylglutathione hydrolase GloC 0.64 EFB2_04399 Thiol:disulfide interchange protein DsbD low > 86
Escherichia coli ECRC101 0.76 MCAODC_24780 gloC hydroxyacylglutathione hydrolase GloC 0.64 MCAODC_02960 dsbD protein-disulfide reductase DsbD low > 87
Escherichia coli ECRC99 0.76 KEDOAH_22345 gloC hydroxyacylglutathione hydrolase GloC 0.64 KEDOAH_15715 dsbD protein-disulfide reductase DsbD
Klebsiella michiganensis M5al 0.76 BWI76_RS09865 MBL fold hydrolase 0.60 BWI76_RS02315 protein-disulfide reductase DsbD low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF3684 Hypothetical metal-binding enzyme, YcbL homolog 0.62 GFF2016 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) 0.50 58
Rahnella sp. WP5 0.73 EX31_RS18150 MBL fold metallo-hydrolase 0.61 EX31_RS08975 protein-disulfide reductase DsbD low > 89
Pantoea sp. MT58 0.72 IAI47_12770 MBL fold metallo-hydrolase 0.60 IAI47_17335 protein-disulfide reductase DsbD low > 76
Erwinia tracheiphila SCR3 0.66 LU632_RS09895 MBL fold metallo-hydrolase 0.56 LU632_RS01840 protein-disulfide reductase DsbD low > 74
Marinobacter adhaerens HP15 0.64 HP15_1191 metallo-beta-lactamase family protein 0.29 HP15_2101 membrane protein containing cytochrome c assembly protein, transmembrane region domain low > 73
Shewanella amazonensis SB2B 0.62 Sama_2142 metallo-beta-lactamase family protein (RefSeq) 0.39 Sama_0538 dipZ thiol:disulfide interchange protein precursor (RefSeq) low > 62
Shewanella oneidensis MR-1 0.61 SO3054 metallo-beta-lactamase family protein (NCBI ptt file) 0.40 SO0696 dsbD thiol:disulfide interchange protein DsbD (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.61 Shewana3_1493 beta-lactamase domain-containing protein (RefSeq) 0.41 Shewana3_3576 dipZ thiol:disulfide interchange protein precursor (RefSeq) low > 73
Dechlorosoma suillum PS 0.60 Dsui_3107 Zn-dependent hydrolase, glyoxylase 0.34 Dsui_0718 thiol:disulfide interchange protein
Shewanella loihica PV-4 0.60 Shew_2269 beta-lactamase domain-containing protein (RefSeq) 0.40 Shew_3266 dipZ thiol:disulfide interchange protein precursor (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.59 CSW01_06415 MBL fold metallo-hydrolase 0.49 CSW01_13635 thiol:disulfide interchange protein DsbD low > 62
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS00645 MBL fold metallo-hydrolase 0.27 QEN71_RS28120 protein-disulfide reductase DsbD
Brevundimonas sp. GW460-12-10-14-LB2 0.58 A4249_RS06505 MBL fold metallo-hydrolase 0.16 A4249_RS11500 protein-disulfide reductase DsbD low > 48
Alteromonas macleodii MIT1002 0.57 MIT1002_03450 Beta-lactamase hydrolase-like protein 0.39 MIT1002_03939 Thiol:disulfide interchange protein DsbD precursor
Paraburkholderia graminis OAS925 0.57 ABIE53_000468 hydroxyacylglutathione hydrolase 0.27 ABIE53_003757 thiol:disulfide interchange protein DsbD low > 113
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_02154 Glyoxylase, beta-lactamase superfamily II 0.28 H281DRAFT_05598 thiol:disulfide interchange protein DsbD
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS01930 hypothetical protein 0.27 BPHYT_RS17970 thiol:disulfide interchange protein
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS19750 MBL fold metallo-hydrolase 0.27 RR42_RS19110 thiol:disulfide interchange protein
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS03825 MBL fold metallo-hydrolase 0.28 ABZR87_RS02695 protein-disulfide reductase DsbD
Ralstonia solanacearum PSI07 0.54 RPSI07_RS08720 MBL fold metallo-hydrolase 0.28 RPSI07_RS10195 protein-disulfide reductase DsbD
Ralstonia solanacearum GMI1000 0.53 RS_RS16370 MBL fold metallo-hydrolase 0.28 RS_RS14985 thiol:disulfide interchange protein DsbD
Ralstonia solanacearum UW163 0.53 UW163_RS05105 MBL fold metallo-hydrolase 0.28 UW163_RS06570 protein-disulfide reductase DsbD
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS08505 MBL fold metallo-hydrolase 0.28 RALBFv3_RS07045 protein-disulfide reductase DsbD
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_1623 Hypothetical metal-binding enzyme, YcbL homolog 0.31 PfGW456L13_2298 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) low > 87
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_2963 Hypothetical metal-binding enzyme, YcbL homolog 0.28 Pf1N1B4_210 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) low > 87
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_15160 MBL fold metallo-hydrolase 0.27 AO353_19365 thiol:disulfide interchange protein low > 101
Pseudomonas stutzeri RCH2 0.32 Psest_3219 Zn-dependent hydrolases, including glyoxylases 0.28 Psest_1603 Thiol:disulfide interchange protein low > 67
Pseudomonas putida KT2440 0.32 PP_0772 Metallo-beta-lactamase family protein 0.26 PP_0561 thiol/disulfide interchange protein 1 low > 96
Pseudomonas fluorescens SBW25 0.31 PFLU_RS04625 MBL fold metallo-hydrolase 0.27 PFLU_RS21490 protein-disulfide reductase DsbD
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS04625 MBL fold metallo-hydrolase 0.27 PFLU_RS21490 protein-disulfide reductase DsbD
Pseudomonas simiae WCS417 0.31 PS417_04560 beta-lactamase 0.27 PS417_19525 thiol:disulfide interchange protein
Pseudomonas sp. S08-1 0.29 OH686_06295 MBL-fold metallo-hydrolase superfamily 0.23 OH686_07580 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase

Not shown: 31 genomes with orthologs for HER17_RS12035 only; 8 genomes with orthologs for HER17_RS18850 only