Conservation of cofitness between HER17_RS06010 and HER17_RS15180 in Pectobacterium carotovorum WPP14

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS06010 Fe-S cluster assembly transcriptional regulator IscR 1.0 HER17_RS15180 CNNM family magnesium/cobalt transport protein CorC 0.68 13
Dickeya dadantii 3937 0.95 DDA3937_RS15550 Fe-S cluster assembly transcriptional regulator IscR 0.85 DDA3937_RS06235 CNNM family magnesium/cobalt transport protein CorC — —
Dickeya dianthicola ME23 0.94 DZA65_RS16725 Fe-S cluster assembly transcriptional regulator IscR 0.84 DZA65_RS06625 CNNM family magnesium/cobalt transport protein CorC low > 75
Dickeya dianthicola 67-19 0.94 HGI48_RS15650 Fe-S cluster assembly transcriptional regulator IscR 0.84 HGI48_RS06280 CNNM family magnesium/cobalt transport protein CorC — —
Serratia liquefaciens MT49 0.92 IAI46_19360 Fe-S cluster assembly transcriptional regulator IscR 0.86 IAI46_06005 CNNM family magnesium/cobalt transport protein CorC low > 86
Rahnella sp. WP5 0.88 EX31_RS20550 Fe-S cluster assembly transcriptional regulator IscR 0.88 EX31_RS23185 CNNM family magnesium/cobalt transport protein CorC low > 89
Erwinia tracheiphila SCR3 0.86 LU632_RS17875 iscR Fe-S cluster assembly transcriptional regulator IscR 0.81 LU632_RS16320 corC CNNM family magnesium/cobalt transport protein CorC low > 74
Pantoea sp. MT58 0.82 IAI47_05000 Fe-S cluster assembly transcriptional regulator IscR 0.83 IAI47_13960 CNNM family magnesium/cobalt transport protein CorC — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF2436 Iron-sulfur cluster regulator IscR 0.82 GFF4575 Magnesium and cobalt efflux protein CorC low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_01178 HTH-type transcriptional regulator IscR 0.82 OHPLBJKB_03054 Magnesium and cobalt efflux protein CorC — —
Enterobacter sp. TBS_079 0.71 MPMX20_03412 HTH-type transcriptional regulator IscR 0.81 MPMX20_01308 Magnesium and cobalt efflux protein CorC low > 85
Escherichia coli BW25113 0.71 b2531 iscR DNA-binding transcriptional repressor (NCBI) 0.82 b0658 ybeX predicteed ion transport (NCBI) low > 76
Escherichia coli ECRC101 0.71 MCAODC_12145 iscR Fe-S cluster assembly transcriptional regulator IscR 0.82 MCAODC_26455 corC CNNM family magnesium/cobalt transport protein CorC low > 87
Escherichia coli ECRC62 0.71 BNILDI_12085 iscR Fe-S cluster assembly transcriptional regulator IscR 0.82 BNILDI_21625 corC CNNM family magnesium/cobalt transport protein CorC low > 75
Escherichia coli BL21 0.71 ECD_02423 isc operon transcriptional repressor; suf operon transcriptional activator; oxidative stress- and iron starvation-inducible; autorepressor 0.82 ECD_00626 putative ion transport 0.77 13
Escherichia coli ECOR38 0.71 HEPCGN_20755 iscR Fe-S cluster assembly transcriptional regulator IscR 0.82 HEPCGN_00990 corC CNNM family magnesium/cobalt transport protein CorC — —
Escherichia coli ECRC102 0.71 NIAGMN_19385 iscR Fe-S cluster assembly transcriptional regulator IscR 0.82 NIAGMN_05295 corC CNNM family magnesium/cobalt transport protein CorC — —
Escherichia coli Nissle 1917 0.71 ECOLIN_RS14370 Fe-S cluster assembly transcriptional regulator IscR 0.82 ECOLIN_RS03540 CNNM family magnesium/cobalt transport protein CorC — —
Escherichia fergusonii Becca 0.71 EFB2_01359 HTH-type transcriptional regulator IscR 0.82 EFB2_03441 Magnesium and cobalt efflux protein CorC low > 86
Escherichia coli ECRC100 0.71 OKFHMN_21615 iscR Fe-S cluster assembly transcriptional regulator IscR 0.82 OKFHMN_07240 corC CNNM family magnesium/cobalt transport protein CorC low > 80
Escherichia coli ECOR27 0.71 NOLOHH_13285 iscR Fe-S cluster assembly transcriptional regulator IscR 0.82 NOLOHH_23620 corC CNNM family magnesium/cobalt transport protein CorC low > 75
Escherichia coli ECRC99 0.71 KEDOAH_06605 iscR Fe-S cluster assembly transcriptional regulator IscR 0.82 KEDOAH_20730 corC CNNM family magnesium/cobalt transport protein CorC — —
Enterobacter asburiae PDN3 0.71 EX28DRAFT_0108 transcriptional regulator, BadM/Rrf2 family 0.81 EX28DRAFT_2313 Putative Mg2+ and Co2+ transporter CorC low > 76
Escherichia coli ECRC98 0.71 JDDGAC_25290 iscR Fe-S cluster assembly transcriptional regulator IscR 0.82 JDDGAC_10885 corC CNNM family magnesium/cobalt transport protein CorC low > 86
Alteromonas macleodii MIT1002 0.70 MIT1002_02802 HTH-type transcriptional regulator IscR 0.56 MIT1002_01477 Magnesium and cobalt efflux protein CorC — —
Klebsiella michiganensis M5al 0.70 BWI76_RS21165 Fe-S cluster assembly transcriptional regulator IscR 0.82 BWI76_RS08120 cobalt transporter low > 92
Shewanella amazonensis SB2B 0.66 Sama_1292 Rrf2 family protein (RefSeq) 0.57 Sama_2578 magnesium and cobalt efflux protein CorC (RefSeq) low > 62
Shewanella loihica PV-4 0.66 Shew_2318 BadM/Rrf2 family transcriptional regulator (RefSeq) 0.58 Shew_2926 CBS domain-containing protein (RefSeq) — —
Shewanella oneidensis MR-1 0.65 SO2263 Rrf2 family protein (NCBI ptt file) 0.57 SO1178 corC magnesium and cobalt efflux protein CorC (NCBI ptt file) — —
Shewanella sp. ANA-3 0.65 Shewana3_2281 BadM/Rrf2 family transcriptional regulator (RefSeq) 0.57 Shewana3_1005 CBS domain-containing protein (RefSeq) low > 73
Pseudomonas sp. RS175 0.61 PFR28_00285 HTH-type transcriptional regulator IscR 0.48 PFR28_03851 Magnesium and cobalt efflux protein CorC low > 88
Pseudomonas sp. S08-1 0.61 OH686_17470 iron-sulfur cluster assembly transcription factor IscR 0.47 OH686_09230 Magnesium and cobalt efflux protein CorC low > 80
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_06650 transcriptional regulator 0.48 AO356_15395 magnesium transporter low > 104
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_15830 transcriptional regulator 0.48 AO353_06390 magnesium transporter low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_1236 transcriptional regulator, BadM/Rrf2 family 0.47 Psyr_4348 CBS:Transporter-associated region low > 86
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_1236 transcriptional regulator, BadM/Rrf2 family 0.47 Psyr_4348 CBS:Transporter-associated region — —
Pseudomonas stutzeri RCH2 0.60 Psest_1250 iron-sulfur cluster assembly transcription factor IscR 0.46 Psest_0529 Putative Mg2+ and Co2+ transporter CorC — —
Pseudomonas putida KT2440 0.59 PP_0841 DNA-binding transcriptional dual regulator 2Fe-2S cluster IscR 0.47 PP_4789 heat shock protein, Co2+ and Mg2+ efflux protein low > 96
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS24860 Fe-S cluster assembly transcriptional regulator IscR 0.48 PFLU_RS26570 HlyC/CorC family transporter low > 109
Pseudomonas fluorescens SBW25 0.59 PFLU_RS24860 Fe-S cluster assembly transcriptional regulator IscR 0.48 PFLU_RS26570 HlyC/CorC family transporter low > 109
Pseudomonas simiae WCS417 0.59 PS417_23205 transcriptional regulator 0.48 PS417_24640 magnesium transporter — —
Kangiella aquimarina DSM 16071 0.55 B158DRAFT_1458 transcriptional regulator, BadM/Rrf2 family 0.41 B158DRAFT_0096 Putative Mg2+ and Co2+ transporter CorC low > 40
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_866 Iron-sulfur cluster regulator IscR 0.48 Pf1N1B4_2709 Magnesium and cobalt efflux protein CorC low > 87
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_4874 Iron-sulfur cluster regulator IscR 0.48 PfGW456L13_1377 Magnesium and cobalt efflux protein CorC low > 87
Acinetobacter radioresistens SK82 0.50 MPMX26_01328 HTH-type transcriptional regulator IscR 0.36 MPMX26_00287 Magnesium and cobalt efflux protein CorC low > 36
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS15775 DNA-binding protein 0.40 HSERO_RS03595 cation transporter — —
Marinobacter adhaerens HP15 0.49 HP15_1487 transcriptional regulator, BadM/Rrf2 family 0.42 HP15_2470 metal ion transporter low > 73
Dechlorosoma suillum PS 0.48 Dsui_2369 iron-sulfur cluster assembly transcription factor IscR 0.40 Dsui_1197 putative Mg2+ and Co2+ transporter CorC low > 51
Castellaniella sp019104865 MT123 0.47 ABCV34_RS05100 Fe-S cluster assembly transcriptional regulator IscR 0.30 ABCV34_RS15330 transporter associated domain-containing protein low > 48
Rhodospirillum rubrum S1H 0.44 Rru_A2028 Transcriptional Regulator, BadM/Rrf2 family (NCBI) 0.26 Rru_A3773 CBS domain protein (NCBI) — —
Magnetospirillum magneticum AMB-1 0.43 AMB_RS15265 Rrf2 family transcriptional regulator 0.22 AMB_RS22600 HlyC/CorC family transporter — —
Phaeobacter inhibens DSM 17395 0.35 PGA1_c15350 putative transcriptional regulator 0.24 PGA1_c04760 magnesium and cobalt efflux protein corC-like protein — —
Desulfovibrio vulgaris Miyazaki F 0.31 DvMF_2591 transcriptional regulator, BadM/Rrf2 family (RefSeq) 0.30 DvMF_0553 CBS domain containing protein (RefSeq) low > 51
Sphingomonas koreensis DSMZ 15582 0.18 Ga0059261_1470 transcriptional regulator, BadM/Rrf2 family 0.22 Ga0059261_1610 CBS domain/Transporter associated domain — —

Not shown: 9 genomes with orthologs for HER17_RS06010 only; 24 genomes with orthologs for HER17_RS15180 only