Conservation of cofitness between HER17_RS02310 and HER17_RS11790 in Pectobacterium carotovorum WPP14

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02310 methionine synthase 1.0 HER17_RS11790 pyruvate kinase 0.54 19
Dickeya dianthicola ME23 0.88 DZA65_RS20250 methionine synthase 0.94 DZA65_RS10570 pyruvate kinase low > 75
Rahnella sp. WP5 0.88 EX31_RS11760 methionine synthase 0.94 EX31_RS10640 pyruvate kinase low > 89
Dickeya dadantii 3937 0.88 DDA3937_RS19040 methionine synthase 0.94 DDA3937_RS10125 pyruvate kinase low > 74
Klebsiella michiganensis M5al 0.88 BWI76_RS01685 methionine synthase 0.92 BWI76_RS18115 pyruvate kinase low > 92
Serratia liquefaciens MT49 0.88 IAI46_23155 methionine synthase 0.95 IAI46_14585 pyruvate kinase low > 86
Enterobacter asburiae PDN3 0.87 EX28DRAFT_4326 methionine synthase (B12-dependent) (EC 2.1.1.13) 0.92 EX28DRAFT_0702 pyruvate kinase low > 76
Dickeya dianthicola 67-19 0.87 HGI48_RS19130 methionine synthase 0.94 HGI48_RS10155 pyruvate kinase low > 71
Enterobacter sp. TBS_079 0.87 MPMX20_00235 Methionine synthase 0.92 MPMX20_02759 Pyruvate kinase II low > 85
Escherichia coli BL21 0.87 ECD_03891 homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent 0.92 ECD_01825 pyruvate kinase II low > 61
Escherichia coli ECRC100 0.87 OKFHMN_13240 metH methionine synthase 0.92 OKFHMN_26320 pyk pyruvate kinase low > 80
Escherichia coli BW25113 0.87 b4019 metH B12-dependent methionine synthase (NCBI) 0.92 b1854 pykA pyruvate kinase (NCBI) low > 76
Escherichia coli ECRC101 0.87 MCAODC_03740 metH methionine synthase 0.92 MCAODC_19085 pyk pyruvate kinase low > 87
Escherichia coli ECRC99 0.87 KEDOAH_14920 metH methionine synthase 0.92 KEDOAH_01785 pyk pyruvate kinase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_04030 Methionine synthase 0.92 OHPLBJKB_01874 Pyruvate kinase II low > 73
Escherichia coli ECRC102 0.87 NIAGMN_10990 metH methionine synthase 0.92 NIAGMN_01740 pyk pyruvate kinase — —
Escherichia coli ECRC62 0.87 BNILDI_06140 metH methionine synthase 0.92 BNILDI_15630 pyk pyruvate kinase low > 75
Escherichia coli ECRC98 0.87 JDDGAC_16865 metH methionine synthase 0.92 JDDGAC_00895 pyk pyruvate kinase low > 86
Escherichia coli ECOR38 0.87 HEPCGN_11885 metH methionine synthase 0.92 HEPCGN_04725 pyk pyruvate kinase low > 87
Escherichia coli ECOR27 0.87 NOLOHH_05380 metH methionine synthase 0.92 NOLOHH_16835 pyk pyruvate kinase low > 75
Escherichia coli Nissle 1917 0.87 ECOLIN_RS23160 methionine synthase 0.92 ECOLIN_RS10330 pyruvate kinase low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF1358 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) 0.92 GFF1633 Pyruvate kinase (EC 2.7.1.40) low > 78
Escherichia fergusonii Becca 0.86 EFB2_04592 Methionine synthase 0.92 EFB2_02088 Pyruvate kinase II low > 86
Pantoea sp. MT58 0.86 IAI47_17990 methionine synthase 0.90 IAI47_08485 pyruvate kinase low > 76
Vibrio cholerae E7946 ATCC 55056 0.76 CSW01_02060 methionine synthase 0.69 CSW01_10025 pyruvate kinase low > 62
Shewanella amazonensis SB2B 0.66 Sama_0758 metH B12-dependent methionine synthase (RefSeq) 0.70 Sama_1814 pyruvate kinase (RefSeq) low > 62
Pseudomonas sp. S08-1 0.66 OH686_03335 methionine synthase 0.53 OH686_18800 pyruvate kinase low > 80
Shewanella sp. ANA-3 0.66 Shewana3_3282 metH B12-dependent methionine synthase (RefSeq) 0.69 Shewana3_2153 pyruvate kinase (RefSeq) low > 73
Pseudomonas simiae WCS417 0.66 PS417_12310 methionine synthase 0.54 PS417_22620 pyruvate kinase low > 88
Pseudomonas stutzeri RCH2 0.66 Psest_2102 5-methyltetrahydrofolate--homocysteine methyltransferase 0.53 Psest_3190 pyruvate kinase low > 67
Pseudomonas sp. RS175 0.66 PFR28_01369 Methionine synthase 0.54 PFR28_03455 Pyruvate kinase II low > 88
Pseudomonas fluorescens SBW25-INTG 0.66 PFLU_RS13000 methionine synthase 0.54 PFLU_RS24255 pyruvate kinase low > 109
Pseudomonas fluorescens SBW25 0.66 PFLU_RS13000 methionine synthase 0.54 PFLU_RS24255 pyruvate kinase low > 109
Shewanella oneidensis MR-1 0.66 SO1030 metH 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI ptt file) 0.69 SO2491 pykA pyruvate kinase II (NCBI ptt file) low > 76
Pseudomonas fluorescens FW300-N2C3 0.66 AO356_00545 methionine synthase 0.54 AO356_17830 pyruvate kinase 0.26 101
Pseudomonas fluorescens GW456-L13 0.66 PfGW456L13_2847 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) 0.53 PfGW456L13_1813 Pyruvate kinase (EC 2.7.1.40) low > 87
Pseudomonas putida KT2440 0.65 PP_2375 cobalamin-dependent methionine synthase 0.54 PP_1362 pyruvate kinase II low > 96
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_21615 methionine synthase 0.54 AO353_03775 pyruvate kinase low > 101
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_2068 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) 0.54 Pf6N2E2_5494 Pyruvate kinase (EC 2.7.1.40) low > 103
Pseudomonas fluorescens FW300-N1B4 0.65 Pf1N1B4_5661 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) 0.54 Pf1N1B4_678 Pyruvate kinase (EC 2.7.1.40) low > 87
Pseudomonas syringae pv. syringae B728a 0.65 Psyr_2464 methionine synthase (B12-dependent) 0.52 Psyr_4029 pyruvate kinase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.65 Psyr_2464 methionine synthase (B12-dependent) 0.52 Psyr_4029 pyruvate kinase low > 86
Shewanella loihica PV-4 0.64 Shew_0710 metH B12-dependent methionine synthase (RefSeq) 0.70 Shew_2050 pyruvate kinase (RefSeq) — —
Kangiella aquimarina DSM 16071 0.64 B158DRAFT_2466 methionine synthase (B12-dependent) (EC 2.1.1.13) 0.60 B158DRAFT_1404 pyruvate kinase low > 40
Marinobacter adhaerens HP15 0.63 HP15_1792 B12-dependent methionine synthase 0.57 HP15_2176 pyruvate kinase II low > 73
Dechlorosoma suillum PS 0.61 Dsui_0779 5-methyltetrahydrofolate--homocysteine methyltransferase 0.52 Dsui_0052 pyruvate kinase — —
Rhodopseudomonas palustris CGA009 0.60 TX73_019180 methionine synthase 0.31 TX73_021735 pyruvate kinase — —
Herbaspirillum seropedicae SmR1 0.60 HSERO_RS21740 methionine synthase 0.46 HSERO_RS03350 hypothetical protein low > 78
Rhizobium sp. OAE497 0.60 ABIE40_RS12135 methionine synthase 0.30 ABIE40_RS16145 pyruvate kinase — —
Agrobacterium fabrum C58 0.60 Atu2155 methionine synthase 0.29 Atu3762 pyruvate kinase — —
Sinorhizobium meliloti 1021 0.60 SMc03112 B12-dependent methionine synthase 0.30 SMc04005 pyruvate kinase low > 103
Castellaniella sp019104865 MT123 0.57 ABCV34_RS14560 methionine synthase 0.55 ABCV34_RS02525 pyruvate kinase low > 48
Magnetospirillum magneticum AMB-1 0.21 AMB_RS02225 methionine synthase 0.33 AMB_RS16010 pyruvate kinase — —
Azospirillum sp. SherDot2 0.21 MPMX19_00637 Methionine synthase 0.32 MPMX19_04460 Pyruvate kinase — —

Not shown: 9 genomes with orthologs for HER17_RS02310 only; 28 genomes with orthologs for HER17_RS11790 only