Conservation of cofitness between HER17_RS02745 and HER17_RS10865 in Pectobacterium carotovorum WPP14

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02745 energy-dependent translational throttle protein EttA 1.0 HER17_RS10865 dipeptide/tripeptide permease DtpA 0.84 19
Enterobacter sp. TBS_079 0.96 MPMX20_00698 Energy-dependent translational throttle protein EttA 0.79 MPMX20_02004 Dipeptide and tripeptide permease A low > 85
Enterobacter asburiae PDN3 0.95 EX28DRAFT_3601 ATP-binding cassette protein, ChvD family 0.79 EX28DRAFT_1630 amino acid/peptide transporter (Peptide:H+ symporter), bacterial low > 76
Escherichia fergusonii Becca 0.95 EFB2_04053 Energy-dependent translational throttle protein EttA 0.76 EFB2_02358 Dipeptide and tripeptide permease A low > 86
Klebsiella michiganensis M5al 0.95 BWI76_RS04175 energy-dependent translational throttle protein EttA 0.78 BWI76_RS16390 dipeptide/tripeptide permease A low > 92
Serratia liquefaciens MT49 0.95 IAI46_02965 energy-dependent translational throttle protein EttA 0.79 IAI46_11450 dipeptide/tripeptide permease DtpA low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.95 OHPLBJKB_03670 Energy-dependent translational throttle protein EttA 0.76 OHPLBJKB_02091 Dipeptide and tripeptide permease A low > 73
Escherichia coli BW25113 0.95 b4391 yjjK fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) 0.76 b1634 tppB putative tripeptide transporter permease (NCBI) low > 76
Escherichia coli Nissle 1917 0.95 ECOLIN_RS25205 energy-dependent translational throttle protein EttA 0.76 ECOLIN_RS09120 dipeptide/tripeptide permease DtpA low > 55
Escherichia coli BL21 0.95 ECD_04267 energy-dependent translational throttle A 0.76 ECD_01604 dipeptide and tripeptide permease A low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF1059 ABC transporter, ATP-binding protein 0.78 GFF3640 Di/tripeptide permease DtpA low > 78
Escherichia coli ECRC98 0.95 JDDGAC_14770 ettA energy-dependent translational throttle protein EttA 0.76 JDDGAC_02105 dtpA dipeptide/tripeptide permease DtpA low > 86
Escherichia coli ECRC99 0.95 KEDOAH_16980 ettA energy-dependent translational throttle protein EttA 0.76 KEDOAH_00590 dtpA dipeptide/tripeptide permease DtpA
Escherichia coli ECRC100 0.95 OKFHMN_11175 ettA energy-dependent translational throttle protein EttA 0.76 OKFHMN_27515 dtpA dipeptide/tripeptide permease DtpA low > 80
Escherichia coli ECRC62 0.95 BNILDI_08090 ettA energy-dependent translational throttle protein EttA 0.76 BNILDI_16825 dtpA dipeptide/tripeptide permease DtpA 0.83 2
Escherichia coli ECRC102 0.95 NIAGMN_09025 ettA energy-dependent translational throttle protein EttA 0.76 NIAGMN_00550 dtpA dipeptide/tripeptide permease DtpA
Escherichia coli ECRC101 0.95 MCAODC_01690 ettA energy-dependent translational throttle protein EttA 0.76 MCAODC_17895 dtpA dipeptide/tripeptide permease DtpA low > 87
Rahnella sp. WP5 0.95 EX31_RS04000 energy-dependent translational throttle protein EttA 0.77 EX31_RS15730 dipeptide/tripeptide permease DtpA low > 89
Escherichia coli ECOR27 0.95 NOLOHH_03505 ettA energy-dependent translational throttle protein EttA 0.76 NOLOHH_18035 dtpA dipeptide/tripeptide permease DtpA low > 75
Escherichia coli ECOR38 0.95 HEPCGN_09180 ettA energy-dependent translational throttle protein EttA 0.76 HEPCGN_05900 dtpA dipeptide/tripeptide permease DtpA low > 87
Pantoea sp. MT58 0.95 IAI47_16325 energy-dependent translational throttle protein EttA 0.75 IAI47_10500 dipeptide/tripeptide permease DtpA low > 76
Shewanella sp. ANA-3 0.84 Shewana3_1093 putative ABC transporter ATP-binding protein (RefSeq) 0.33 Shewana3_3089 amino acid/peptide transporter (RefSeq) low > 73
Shewanella oneidensis MR-1 0.83 SO3472 ABC transporter, ATP-binding protein (NCBI ptt file) 0.33 SO1277 proton-dependent oligopeptide transporter (POT) family protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.83 Sama_1013 putative ABC transporter ATP-binding protein (RefSeq) 0.34 Sama_1177 proton-dependent oligopeptide transporter (POT) family protein (RefSeq) low > 62
Shewanella loihica PV-4 0.83 Shew_1183 putative ABC transporter ATP-binding protein (RefSeq) 0.19 Shew_1397 amino acid/peptide transporter (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.82 CSW01_03650 energy-dependent translational throttle protein EttA 0.56 CSW01_05045 dipeptide/tripeptide permease DtpA low > 62
Alteromonas macleodii MIT1002 0.78 MIT1002_02704 putative ABC transporter ATP-binding protein 0.17 MIT1002_00972 Di-/tripeptide transporter low > 70
Dyella japonica UNC79MFTsu3.2 0.75 ABZR86_RS10725 energy-dependent translational throttle protein EttA 0.20 ABZR86_RS18460 oligopeptide:H+ symporter
Rhodanobacter denitrificans MT42 0.73 LRK55_RS04405 energy-dependent translational throttle protein EttA 0.34 LRK55_RS03800 oligopeptide:H+ symporter
Rhodanobacter sp. FW510-T8 0.73 OKGIIK_11445 ettA energy-dependent translational throttle protein EttA 0.33 OKGIIK_10890 pTR2 MFS transporter low > 52
Rhodanobacter denitrificans FW104-10B01 0.73 LRK54_RS04630 energy-dependent translational throttle protein EttA 0.34 LRK54_RS04030 oligopeptide:H+ symporter low > 59
Paraburkholderia graminis OAS925 0.73 ABIE53_003656 sulfate-transporting ATPase 0.34 ABIE53_004167 POT family proton-dependent oligopeptide transporter low > 113
Paraburkholderia sabiae LMG 24235 0.73 QEN71_RS27625 energy-dependent translational throttle protein EttA 0.37 QEN71_RS18370 oligopeptide:H+ symporter low > 153
Paraburkholderia bryophila 376MFSha3.1 0.73 H281DRAFT_05699 sulfate-transporting ATPase 0.33 H281DRAFT_03131 proton-dependent oligopeptide transporter, POT family low > 103
Lysobacter sp. OAE881 0.73 ABIE51_RS04610 energy-dependent translational throttle protein EttA 0.20 ABIE51_RS04065 oligopeptide:H+ symporter
Burkholderia phytofirmans PsJN 0.72 BPHYT_RS17480 ABC transporter ATP-binding protein 0.34 BPHYT_RS22060 amino acid transporter 0.39 1
Xanthomonas campestris pv. campestris strain 8004 0.70 Xcc-8004.4400.1 ABC transporter, ATP-binding protein 0.18 Xcc-8004.574.1 Di-/tripeptide transporter
Mucilaginibacter yixingensis YX-36 DSM 26809 0.60 ABZR88_RS04815 energy-dependent translational throttle protein EttA 0.10 ABZR88_RS08000 POT family MFS transporter low > 71
Echinicola vietnamensis KMM 6221, DSM 17526 0.59 Echvi_0034 ATP-binding cassette protein, ChvD family 0.16 Echvi_2958 amino acid/peptide transporter (Peptide:H+ symporter), bacterial 0.23 70
Pedobacter sp. GW460-11-11-14-LB5 0.58 CA265_RS14910 ABC transporter ATP-binding protein 0.20 CA265_RS06570 MFS transporter low > 88
Parabacteroides merdae CL09T00C40 0.58 HMPREF1078_RS07420 energy-dependent translational throttle protein EttA 0.12 HMPREF1078_RS15310 peptide MFS transporter low > 61
Pontibacter actiniarum KMM 6156, DSM 19842 0.57 CA264_18150 energy-dependent translational throttle protein EttA 0.16 CA264_05275 MFS transporter low > 74
Bacteroides stercoris CC31F 0.56 HMPREF1181_RS12740 energy-dependent translational throttle protein EttA 0.16 HMPREF1181_RS06265 peptide MFS transporter low > 56
Phocaeicola vulgatus CL09T03C04 0.56 HMPREF1058_RS17820 energy-dependent translational throttle protein EttA 0.12 HMPREF1058_RS01725 peptide MFS transporter low > 67
Phocaeicola dorei CL03T12C01 0.56 ABI39_RS14035 energy-dependent translational throttle protein EttA 0.12 ABI39_RS15340 peptide MFS transporter low > 72
Bacteroides ovatus ATCC 8483 0.56 BACOVA_03986 ATP-binding cassette protein, ChvD family 0.16 BACOVA_05220 amino acid/peptide transporter 0.31 83
Bacteroides thetaiotaomicron VPI-5482 0.56 BT1186 ABC transporter ATP-binding protein (NCBI ptt file) 0.16 BT4385 di-tripeptide ABC transporter (NCBI ptt file) low > 81
Sphingomonas koreensis DSMZ 15582 0.56 Ga0059261_0048 ATP-binding cassette protein, ChvD family 0.19 Ga0059261_1312 amino acid/peptide transporter (Peptide:H+ symporter), bacterial
Brevundimonas sp. GW460-12-10-14-LB2 0.56 A4249_RS07905 energy-dependent translational throttle protein EttA 0.15 A4249_RS10880 oligopeptide:H+ symporter

Not shown: 51 genomes with orthologs for HER17_RS02745 only; 0 genomes with orthologs for HER17_RS10865 only