Conservation of cofitness between HER17_RS12030 and HER17_RS05560 in Pectobacterium carotovorum WPP14

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12030 aspartate/tyrosine/aromatic aminotransferase 1.0 HER17_RS05560 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.93 1
Serratia liquefaciens MT49 0.88 IAI46_08750 aspartate/tyrosine/aromatic aminotransferase 0.79 IAI46_21240 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 86
Escherichia coli ECRC62 0.87 BNILDI_20195 aspC aspartate transaminase 0.78 BNILDI_08925 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 75
Escherichia coli BL21 0.87 ECD_00932 aspartate aminotransferase, PLP-dependent 0.78 ECD_00133 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Escherichia coli ECOR27 0.87 NOLOHH_21940 aspC aspartate transaminase 0.78 NOLOHH_02745 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 75
Escherichia coli ECOR38 0.87 HEPCGN_23140 aspC aspartate transaminase 0.78 HEPCGN_08375 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 87
Escherichia coli BW25113 0.87 b0928 aspC aspartate aminotransferase, PLP-dependent (NCBI) 0.78 b0134 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_02738 Aspartate aminotransferase 0.78 OHPLBJKB_03527 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 73
Escherichia coli Nissle 1917 0.86 ECOLIN_RS04910 aspartate transaminase 0.77 ECOLIN_RS00745 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Rahnella sp. WP5 0.86 EX31_RS18145 aspartate/tyrosine/aromatic aminotransferase 0.80 EX31_RS03280 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 89
Escherichia fergusonii Becca 0.86 EFB2_03136 Aspartate aminotransferase 0.77 EFB2_03910 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 86
Escherichia coli ECRC99 0.86 KEDOAH_22350 aspC aspartate transaminase 0.77 KEDOAH_17755 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Escherichia coli ECRC98 0.86 JDDGAC_08995 aspC aspartate transaminase 0.78 JDDGAC_13995 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 86
Escherichia coli ECRC100 0.86 OKFHMN_05385 aspC aspartate transaminase 0.78 OKFHMN_10400 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.88 2
Escherichia coli ECRC101 0.86 MCAODC_24775 aspC aspartate transaminase 0.78 MCAODC_00915 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 87
Escherichia coli ECRC102 0.86 NIAGMN_03105 aspC aspartate transaminase 0.78 NIAGMN_08250 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Klebsiella michiganensis M5al 0.86 BWI76_RS09870 aromatic amino acid aminotransferase 0.77 BWI76_RS04995 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 92
Dickeya dianthicola 67-19 0.86 HGI48_RS12990 aspartate/tyrosine/aromatic aminotransferase 0.81 HGI48_RS16070 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.86 3
Enterobacter sp. TBS_079 0.86 MPMX20_01586 Aspartate aminotransferase 0.78 MPMX20_00827 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF3685 Aspartate aminotransferase (EC 2.6.1.1) 0.77 GFF91 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 78
Dickeya dadantii 3937 0.85 DDA3937_RS12915 aspartate/tyrosine/aromatic aminotransferase 0.81 DDA3937_RS15955 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.79 21
Enterobacter asburiae PDN3 0.85 EX28DRAFT_2008 Aspartate/tyrosine/aromatic aminotransferase 0.77 EX28DRAFT_3730 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 76
Dickeya dianthicola ME23 0.85 DZA65_RS13450 aspartate/tyrosine/aromatic aminotransferase 0.81 DZA65_RS17155 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.82 7
Pantoea sp. MT58 0.84 IAI47_12765 aspartate/tyrosine/aromatic aminotransferase 0.72 IAI47_15655 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 76
Erwinia tracheiphila SCR3 0.83 LU632_RS09905 aspartate/tyrosine/aromatic aminotransferase 0.76 LU632_RS20100 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.79 28
Shewanella loihica PV-4 0.66 Shew_1999 aromatic amino acid aminotransferase (RefSeq) 0.64 Shew_3133 3-methyl-2-oxobutanoate hydroxymethyltransferase (RefSeq) — —
Shewanella sp. ANA-3 0.64 Shewana3_2121 aromatic amino acid aminotransferase (RefSeq) 0.62 Shewana3_3408 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.64 Sama_1805 aromatic amino acid aminotransferase (RefSeq) 0.63 Sama_0776 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase (RefSeq) — —
Shewanella oneidensis MR-1 0.64 SO2350 aspC-1 aspartate aminotransferase (NCBI ptt file) 0.63 SO0870 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_06530 aromatic amino acid aminotransferase 0.67 CSW01_03135 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Castellaniella sp019104865 MT123 0.49 ABCV34_RS05115 amino acid aminotransferase 0.35 ABCV34_RS13815 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.130.1 hypothetical protein 0.49 Xcc-8004.3052.1 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) — —
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_13195 Aminotransferase 0.46 OKGIIK_03885 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 52
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_2632 tyrosine aminotransferase (EC 2.6.1.57) (from data) 0.56 Pf6N2E2_5153 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 103
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_03985 L-phenylalanine transaminase (EC 2.6.1.57) (from data) 0.56 AO356_16060 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 104
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS10685 aspartate/tyrosine/aromatic aminotransferase 0.47 LRK54_RS15115 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_4396 tyrosine aminotransferase (EC 2.6.1.57) (from data) 0.55 PfGW456L13_1521 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 87
Pseudomonas fluorescens SBW25 0.46 PFLU_RS21880 aspartate/tyrosine/aromatic aminotransferase 0.54 PFLU_RS25750 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 109
Pseudomonas simiae WCS417 0.46 PS417_19910 aromatic amino acid aminotransferase 0.55 PS417_23910 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 88
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS21880 aspartate/tyrosine/aromatic aminotransferase 0.54 PFLU_RS25750 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 109
Pseudomonas sp. RS175 0.46 PFR28_00800 Aspartate aminotransferase 0.57 PFR28_03721 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 88
Rhodanobacter denitrificans MT42 0.45 LRK55_RS10325 amino acid aminotransferase 0.47 LRK55_RS14830 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 63
Marinobacter adhaerens HP15 0.45 HP15_858 phenylalanine aminotransferase (EC 2.6.1.57) (from data) 0.56 HP15_324 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Alteromonas macleodii MIT1002 0.45 MIT1002_02269 Aspartate aminotransferase 0.64 MIT1002_03694 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Pseudomonas sp. S08-1 0.45 OH686_21225 Aspartate aminotransferase or Aromatic-amino-acid aminotransferase 0.56 OH686_17245 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_1973 Aspartate transaminase 0.55 Psyr_0828 ketopantoate hydroxymethyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_1973 Aspartate transaminase 0.55 Psyr_0828 ketopantoate hydroxymethyltransferase — —
Sphingomonas koreensis DSMZ 15582 0.41 Ga0059261_1688 Aspartate/tyrosine/aromatic aminotransferase 0.34 Ga0059261_0311 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Sinorhizobium meliloti 1021 0.40 SMc00387 aromatic amino acid aminotransferase 0.34 SMc01881 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 103
Phaeobacter inhibens DSM 17395 0.40 PGA1_c29420 aromatic-amino-acid transaminase [EC:2.6.1.57] (from data) 0.36 PGA1_c32050 3-methyl-2-oxobutanoate hydroxymethyltransferase PanB — —
Azospirillum sp. SherDot2 0.39 MPMX19_05266 Aspartate aminotransferase 0.36 MPMX19_01580 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 112
Dinoroseobacter shibae DFL-12 0.35 Dshi_0145 Aspartate transaminase (RefSeq) 0.30 Dshi_2966 3-methyl-2-oxobutanoate hydroxymethyltransferase (RefSeq) — —

Not shown: 0 genomes with orthologs for HER17_RS12030 only; 47 genomes with orthologs for HER17_RS05560 only