Conservation of cofitness between HER17_RS12030 and HER17_RS01070 in Pectobacterium carotovorum WPP14

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12030 aspartate/tyrosine/aromatic aminotransferase 1.0 HER17_RS01070 branched-chain amino acid transaminase 0.91 5
Serratia liquefaciens MT49 0.88 IAI46_08750 aspartate/tyrosine/aromatic aminotransferase 0.93 IAI46_24350 branched-chain-amino-acid transaminase low > 86
Escherichia coli ECRC62 0.87 BNILDI_20195 aspC aspartate transaminase 0.90 BNILDI_04745 ilvE branched-chain-amino-acid transaminase low > 75
Escherichia coli ECOR38 0.87 HEPCGN_23140 aspC aspartate transaminase 0.90 HEPCGN_13355 ilvE branched-chain-amino-acid transaminase low > 87
Escherichia coli BW25113 0.87 b0928 aspC aspartate aminotransferase, PLP-dependent (NCBI) 0.90 b3770 ilvE branched-chain amino acid aminotransferase (NCBI) low > 76
Escherichia coli ECOR27 0.87 NOLOHH_21940 aspC aspartate transaminase 0.90 NOLOHH_06780 ilvE branched-chain-amino-acid transaminase 0.79 40
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_02738 Aspartate aminotransferase 0.90 OHPLBJKB_04283 Branched-chain-amino-acid aminotransferase low > 73
Escherichia coli BL21 0.87 ECD_00932 aspartate aminotransferase, PLP-dependent 0.90 ECD_03648 branched-chain amino acid aminotransferase — —
Rahnella sp. WP5 0.86 EX31_RS18145 aspartate/tyrosine/aromatic aminotransferase 0.96 EX31_RS15000 branched-chain amino acid transaminase low > 89
Escherichia coli Nissle 1917 0.86 ECOLIN_RS04910 aspartate transaminase 0.90 ECOLIN_RS21660 branched-chain-amino-acid transaminase — —
Escherichia fergusonii Becca 0.86 EFB2_03136 Aspartate aminotransferase 0.90 EFB2_04866 Branched-chain-amino-acid aminotransferase low > 86
Escherichia coli ECRC101 0.86 MCAODC_24775 aspC aspartate transaminase 0.90 MCAODC_05150 ilvE branched-chain-amino-acid transaminase low > 87
Escherichia coli ECRC102 0.86 NIAGMN_03105 aspC aspartate transaminase 0.90 NIAGMN_12400 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC99 0.86 KEDOAH_22350 aspC aspartate transaminase 0.90 KEDOAH_13505 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC98 0.86 JDDGAC_08995 aspC aspartate transaminase 0.90 JDDGAC_18265 ilvE branched-chain-amino-acid transaminase low > 86
Escherichia coli ECRC100 0.86 OKFHMN_05385 aspC aspartate transaminase 0.90 OKFHMN_14645 ilvE branched-chain-amino-acid transaminase low > 80
Klebsiella michiganensis M5al 0.86 BWI76_RS09870 aromatic amino acid aminotransferase 0.91 BWI76_RS00970 branched chain amino acid aminotransferase 0.28 59
Dickeya dianthicola 67-19 0.86 HGI48_RS12990 aspartate/tyrosine/aromatic aminotransferase 0.93 HGI48_RS20300 branched-chain-amino-acid transaminase low > 71
Enterobacter sp. TBS_079 0.86 MPMX20_01586 Aspartate aminotransferase 0.90 MPMX20_04500 Branched-chain-amino-acid aminotransferase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF3685 Aspartate aminotransferase (EC 2.6.1.1) 0.91 GFF2902 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 78
Dickeya dadantii 3937 0.85 DDA3937_RS12915 aspartate/tyrosine/aromatic aminotransferase 0.94 DDA3937_RS20160 branched-chain-amino-acid transaminase 0.69 43
Enterobacter asburiae PDN3 0.85 EX28DRAFT_2008 Aspartate/tyrosine/aromatic aminotransferase 0.90 EX28DRAFT_4442 branched-chain amino acid aminotransferase, group I low > 76
Dickeya dianthicola ME23 0.85 DZA65_RS13450 aspartate/tyrosine/aromatic aminotransferase 0.94 DZA65_RS21340 branched-chain amino acid transaminase low > 75
Pantoea sp. MT58 0.84 IAI47_12765 aspartate/tyrosine/aromatic aminotransferase 0.87 IAI47_01030 branched-chain amino acid transaminase low > 76
Erwinia tracheiphila SCR3 0.83 LU632_RS09905 aspartate/tyrosine/aromatic aminotransferase 0.88 LU632_RS24405 branched-chain amino acid transaminase low > 74
Shewanella loihica PV-4 0.66 Shew_1999 aromatic amino acid aminotransferase (RefSeq) 0.69 Shew_0291 branched-chain amino acid aminotransferase (RefSeq) low > 60
Shewanella sp. ANA-3 0.64 Shewana3_2121 aromatic amino acid aminotransferase (RefSeq) 0.17 Shewana3_3830 branched-chain amino acid aminotransferase (RefSeq) 0.71 1
Shewanella amazonensis SB2B 0.64 Sama_1805 aromatic amino acid aminotransferase (RefSeq) 0.19 Sama_3299 branched-chain amino acid aminotransferase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.64 SO2350 aspC-1 aspartate aminotransferase (NCBI ptt file) 0.17 SO0340 ilvE branched-chain amino acid aminotransferase (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_06530 aromatic amino acid aminotransferase 0.77 CSW01_00145 branched-chain-amino-acid transaminase low > 62
Castellaniella sp019104865 MT123 0.49 ABCV34_RS05115 amino acid aminotransferase 0.46 ABCV34_RS07930 branched-chain amino acid transaminase — —
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.130.1 hypothetical protein 0.20 Xcc-8004.4199.1 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.67 6
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_13195 Aminotransferase 0.54 OKGIIK_11840 ilvE branched-chain amino acid transaminase low > 52
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_03985 L-phenylalanine transaminase (EC 2.6.1.57) (from data) 0.19 AO356_22970 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 104
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_2632 tyrosine aminotransferase (EC 2.6.1.57) (from data) 0.19 Pf6N2E2_477 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 103
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS10685 aspartate/tyrosine/aromatic aminotransferase 0.54 LRK54_RS10340 branched-chain amino acid transaminase 0.66 2
Pseudomonas fluorescens SBW25 0.46 PFLU_RS21880 aspartate/tyrosine/aromatic aminotransferase 0.19 PFLU_RS19375 branched-chain amino acid aminotransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS21880 aspartate/tyrosine/aromatic aminotransferase 0.19 PFLU_RS19375 branched-chain amino acid aminotransferase 0.16 28
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_4396 tyrosine aminotransferase (EC 2.6.1.57) (from data) 0.27 PfGW456L13_4923 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 87
Pseudomonas simiae WCS417 0.46 PS417_19910 aromatic amino acid aminotransferase 0.19 PS417_17565 branched-chain amino acid aminotransferase low > 88
Pseudomonas sp. RS175 0.46 PFR28_00800 Aspartate aminotransferase 0.19 PFR28_02449 putative branched-chain-amino-acid aminotransferase low > 88
Rhodanobacter denitrificans MT42 0.45 LRK55_RS10325 amino acid aminotransferase 0.54 LRK55_RS09980 branched-chain amino acid transaminase low > 63
Marinobacter adhaerens HP15 0.45 HP15_858 phenylalanine aminotransferase (EC 2.6.1.57) (from data) 0.44 HP15_436 branched-chain-amino-acid aminotransferase — —
Alteromonas macleodii MIT1002 0.45 MIT1002_02269 Aspartate aminotransferase 0.16 MIT1002_00377 Branched-chain-amino-acid aminotransferase 2 — —
Pseudomonas sp. S08-1 0.45 OH686_21225 Aspartate aminotransferase or Aromatic-amino-acid aminotransferase 0.47 OH686_09695 branched-chain amino acid aminotransferase low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_1973 Aspartate transaminase 0.21 Psyr_1148 branched chain amino acid aminotransferase apoenzyme low > 86
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_1973 Aspartate transaminase 0.21 Psyr_1148 branched chain amino acid aminotransferase apoenzyme low > 86
Sphingomonas koreensis DSMZ 15582 0.41 Ga0059261_1688 Aspartate/tyrosine/aromatic aminotransferase 0.22 Ga0059261_3811 branched-chain amino acid aminotransferase, group II low > 68
Sinorhizobium meliloti 1021 0.40 SMc00387 aromatic amino acid aminotransferase 0.20 SMc02896 branched-chain amino acid aminotransferase low > 103
Phaeobacter inhibens DSM 17395 0.40 PGA1_c29420 aromatic-amino-acid transaminase [EC:2.6.1.57] (from data) 0.29 PGA1_c34110 branched-chain-amino-acid aminotransferase IlvE — —
Azospirillum sp. SherDot2 0.39 MPMX19_05266 Aspartate aminotransferase 0.17 MPMX19_02406 Branched-chain-amino-acid aminotransferase low > 112
Dinoroseobacter shibae DFL-12 0.35 Dshi_0145 Aspartate transaminase (RefSeq) 0.25 Dshi_3301 branched-chain amino acid aminotransferase (RefSeq) — —

Not shown: 0 genomes with orthologs for HER17_RS12030 only; 49 genomes with orthologs for HER17_RS01070 only