| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas simiae WCS417 | 1.0 | PS417_04290 | | hypothetical protein | 1.0 | PS417_04285 | | protease TldD | 0.34 | 18 |
| Pseudomonas fluorescens SBW25-INTG | 0.96 | PFLU_RS04345 | | ribosome-associated protein | 1.00 | PFLU_RS04340 | | metalloprotease TldD | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.96 | PFLU_RS04345 | | ribosome-associated protein | 1.00 | PFLU_RS04340 | | metalloprotease TldD | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.91 | PfGW456L13_5025 | | FIG138315: Putative alpha helix protein | 0.92 | PfGW456L13_5026 | | TldD protein, part of TldE/TldD proteolytic complex | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.91 | Pf1N1B4_1091 | | FIG138315: Putative alpha helix protein | 0.92 | Pf1N1B4_1092 | | TldD protein, part of TldE/TldD proteolytic complex | 0.26 | 48 |
| Pseudomonas fluorescens FW300-N2C3 | 0.90 | AO356_07090 | | hypothetical protein | 0.92 | AO356_07095 | | protease TldD | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.89 | Pf6N2E2_3279 | | FIG138315: Putative alpha helix protein | 0.92 | Pf6N2E2_3280 | | TldD protein, part of TldE/TldD proteolytic complex | low | > 103 |
| Pseudomonas fluorescens FW300-N2E3 | 0.89 | AO353_05210 | | hypothetical protein | 0.92 | AO353_05215 | | protease TldD | low | > 101 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.89 | Psyr_4155 | | Protein of unknown function DUF615 | 0.91 | Psyr_4156 | | microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.89 | Psyr_4155 | | Protein of unknown function DUF615 | 0.91 | Psyr_4156 | | microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 | low | > 86 |
| Pseudomonas sp. RS175 | 0.89 | PFR28_00162 | | hypothetical protein | 0.90 | PFR28_00161 | | Metalloprotease TldD | low | > 88 |
| Pseudomonas sp. S08-1 | 0.80 | OH686_08575 | | UPF0307 protein YjgA | 0.82 | OH686_08580 | | TldD protein, part of TldE/TldD proteolytic complex | low | > 80 |
| Pseudomonas putida KT2440 | 0.77 | PP_0941 | | putative ribosome associated protein | 0.88 | PP_0940 | | putative protease involved in Microcin B17 maturation and in sensitivity to the DNA gyrase inhibitor LetD | low | > 96 |
| Pseudomonas stutzeri RCH2 | 0.74 | Psest_3319 | | Uncharacterized protein conserved in bacteria | 0.80 | Psest_3320 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.24 | 4 |
| Kangiella aquimarina DSM 16071 | 0.36 | B158DRAFT_2073 | | Uncharacterized protein conserved in bacteria | 0.62 | B158DRAFT_2072 | | microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 | low | > 40 |
| Pectobacterium carotovorum WPP14 | 0.36 | HER17_RS20095 | | ribosome-associated protein | 0.63 | HER17_RS20140 | | metalloprotease TldD | — | — |
| Serratia liquefaciens MT49 | 0.34 | IAI46_22590 | | ribosome-associated protein | 0.66 | IAI46_22685 | | metalloprotease TldD | — | — |
| Enterobacter sp. TBS_079 | 0.34 | MPMX20_00516 | | hypothetical protein | 0.64 | MPMX20_04151 | | Metalloprotease TldD | — | — |
| Dickeya dadantii 3937 | 0.34 | DDA3937_RS01495 | | ribosome-associated protein | 0.65 | DDA3937_RS01460 | | metalloprotease TldD | low | > 74 |
| Enterobacter asburiae PDN3 | 0.34 | EX28DRAFT_3421 | | Uncharacterized protein conserved in bacteria | 0.63 | EX28DRAFT_3295 | | Predicted Zn-dependent proteases and their inactivated homologs | — | — |
| Pantoea sp. MT58 | 0.32 | IAI47_02760 | | ribosome-associated protein | 0.66 | IAI47_02465 | | metalloprotease TldD | — | — |
| Dickeya dianthicola ME23 | 0.32 | DZA65_RS01475 | | ribosome-associated protein | 0.65 | DZA65_RS01440 | | metalloprotease TldD | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.32 | Xcc-8004.1884.1 | | FIG138315: Putative alpha helix protein | 0.63 | Xcc-8004.1883.1 | | TldD protein, part of TldE/TldD proteolytic complex | — | — |
| Dickeya dianthicola 67-19 | 0.32 | HGI48_RS01410 | | ribosome-associated protein | 0.65 | HGI48_RS01380 | | metalloprotease TldD | low | > 71 |
| Erwinia tracheiphila SCR3 | 0.32 | LU632_RS02140 | | ribosome-associated protein | 0.63 | LU632_RS21420 | tldD | metalloprotease TldD | low | > 74 |
| Klebsiella michiganensis M5al | 0.32 | BWI76_RS02845 | | hypothetical protein | 0.64 | BWI76_RS25470 | | metalloprotease TldD | — | — |
| Escherichia coli ECOR27 | 0.32 | NOLOHH_04190 | yjgA | ribosome-associated protein | 0.64 | NOLOHH_09555 | tldD | metalloprotease TldD | low | > 57 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.32 | OHPLBJKB_03801 | | hypothetical protein | 0.64 | OHPLBJKB_00460 | | Metalloprotease TldD | low | > 73 |
| Escherichia fergusonii Becca | 0.32 | EFB2_04299 | | hypothetical protein | 0.64 | EFB2_00586 | | Metalloprotease TldD | low | > 86 |
| Escherichia coli Nissle 1917 | 0.32 | ECOLIN_RS24565 | | ribosome biogenesis factor YjgA | 0.64 | ECOLIN_RS18595 | | metalloprotease TldD | low | > 52 |
| Escherichia coli ECOR38 | 0.32 | HEPCGN_10130 | yjgA | ribosome-associated protein | 0.64 | HEPCGN_16620 | tldD | metalloprotease TldD | low | > 85 |
| Escherichia coli BW25113 | 0.32 | b4234 | yjgA | hypothetical protein (NCBI) | 0.64 | b3244 | tldD | predicted peptidase (NCBI) | low | > 76 |
| Escherichia coli ECRC98 | 0.32 | JDDGAC_15570 | yjgA | ribosome-associated protein | 0.64 | JDDGAC_21380 | tldD | metalloprotease TldD | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.32 | GFF903 | | FIG138315: Putative alpha helix protein | 0.64 | GFF2140 | | TldD protein, part of TldE/TldD proteolytic complex | — | — |
| Escherichia coli ECRC62 | 0.32 | BNILDI_07320 | yjgA | ribosome-associated protein | 0.64 | BNILDI_01980 | tldD | metalloprotease TldD | — | — |
| Escherichia coli BL21 | 0.32 | ECD_04102 | | ribosome-associated UPF0307 family protein | 0.64 | ECD_03104 | | putative peptidase | low | > 60 |
| Escherichia coli ECRC101 | 0.32 | OKFHMN_11930 | yjgA | ribosome-associated protein | 0.64 | OKFHMN_17755 | tldD | metalloprotease TldD | — | — |
| Escherichia coli ECRC102 | 0.32 | NIAGMN_09780 | yjgA | ribosome-associated protein | 0.64 | NIAGMN_15515 | tldD | metalloprotease TldD | — | — |
| Escherichia coli ECRC101 | 0.32 | MCAODC_02435 | yjgA | ribosome-associated protein | 0.64 | MCAODC_08275 | tldD | metalloprotease TldD | — | — |
| Escherichia coli ECRC99 | 0.32 | KEDOAH_16225 | yjgA | ribosome-associated protein | 0.64 | KEDOAH_10395 | tldD | metalloprotease TldD | — | — |
| Rahnella sp. WP5 | 0.31 | EX31_RS12315 | | ribosome-associated protein | 0.63 | EX31_RS12265 | | metalloprotease TldD | low | > 89 |
| Lysobacter sp. OAE881 | 0.30 | ABIE51_RS06800 | | ribosome biogenesis factor YjgA | 0.64 | ABIE51_RS06795 | | metalloprotease TldD | low | > 62 |
| Paraburkholderia sabiae LMG 24235 | 0.29 | QEN71_RS04265 | | ribosome biogenesis factor YjgA | 0.58 | QEN71_RS26555 | | metalloprotease TldD | 0.79 | 133 |
| Dyella japonica UNC79MFTsu3.2 | 0.29 | ABZR86_RS21710 | | ribosome biogenesis factor YjgA | 0.65 | ABZR86_RS21715 | | metalloprotease TldD | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.28 | OKGIIK_10270 | | DUF615 domain-containing protein | 0.64 | OKGIIK_10280 | tldD | metalloprotease TldD | low | > 52 |
| Castellaniella sp019104865 MT123 | 0.28 | ABCV34_RS10615 | | ribosome biogenesis factor YjgA | 0.58 | ABCV34_RS02590 | | metalloprotease TldD | low | > 48 |
| Rhodanobacter denitrificans FW104-10B01 | 0.27 | LRK54_RS03385 | | DUF615 domain-containing protein | 0.62 | LRK54_RS03395 | | metalloprotease TldD | — | — |
| Shewanella amazonensis SB2B | 0.27 | Sama_0481 | | hypothetical protein (RefSeq) | 0.61 | Sama_0474 | | TldD protein (RefSeq) | low | > 62 |
| Rhodanobacter denitrificans MT42 | 0.27 | LRK55_RS03135 | | ribosome biogenesis factor YjgA | 0.62 | LRK55_RS03145 | | metalloprotease TldD | — | — |
| Shewanella oneidensis MR-1 | 0.26 | SO4079 | | conserved hypothetical protein (NCBI ptt file) | 0.62 | SO4091 | tldD | tldD protein (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.25 | Shewana3_3632 | | hypothetical protein (RefSeq) | 0.65 | Shewana3_3641 | | microcin-processing peptidase 2 (RefSeq) | low | > 73 |
| Alteromonas macleodii MIT1002 | 0.24 | MIT1002_00229 | | x96 protein | 0.63 | MIT1002_00227 | | protease TldD | low | > 70 |
| Dechlorosoma suillum PS | 0.23 | Dsui_1235 | | hypothetical protein | 0.58 | Dsui_3401 | | putative Zn-dependent protease-like protein | low | > 51 |
| Shewanella loihica PV-4 | 0.20 | Shew_0415 | | hypothetical protein (RefSeq) | 0.64 | Shew_0410 | | peptidase U62, modulator of DNA gyrase (RefSeq) | low | > 60 |
Not shown: 4 genomes with orthologs for PS417_04290 only; 35 genomes with orthologs for PS417_04285 only