Conservation of cofitness between HP15_938 and HP15_737 in Marinobacter adhaerens HP15

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_938 spermidine/putrescine ABC transporter, permease protein 1.0 HP15_737 DNA polymerase IV 0.74 11
Shewanella loihica PV-4 0.72 Shew_0975 binding-protein-dependent transport systems inner membrane component (RefSeq) 0.44 Shew_2871 DNA polymerase IV (RefSeq) low > 60
Shewanella oneidensis MR-1 0.72 SO1272 polyamine ABC transporter, permease protein (NCBI ptt file) 0.45 SO1114 dinP DNA-damage-inducible protein P (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.71 Shewana3_3095 binding-protein-dependent transport systems inner membrane component (RefSeq) 0.46 Shewana3_0949 DNA polymerase IV (RefSeq) low > 73
Shewanella amazonensis SB2B 0.69 Sama_2640 binding-protein-dependent transport systems inner membrane component (RefSeq) 0.46 Sama_2527 DNA polymerase IV (RefSeq) low > 62
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_29315 spermidine/putrescine ABC transporter permease 0.47 AO353_16910 DNA polymerase IV low > 101
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_2262 Lysine ABC transporter, permease component (from data) 0.47 Pf1N1B4_3165 DNA polymerase IV (EC 2.7.7.7) low > 87
Pseudomonas fluorescens FW300-N2E2 0.66 Pf6N2E2_4516 Putrescine transport system permease protein PotH (TC 3.A.1.11.2) 0.46 Pf6N2E2_2974 DNA polymerase IV (EC 2.7.7.7) low > 103
Pseudomonas sp. S08-1 0.66 OH686_11450 Putrescine transport system permease protein PotH 0.49 OH686_18925 DNA polymerase IV low > 80
Pseudomonas putida KT2440 0.66 PP_5178 spermidine/putrescine ABC transporter - inner membrane subunit 0.46 PP_1203 DNA polymerase IV low > 96
Pseudomonas sp. RS175 0.66 PFR28_04292 Putrescine transport system permease protein PotH 0.46 PFR28_00492 DNA polymerase IV low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.65 Psyr_4862 Binding-protein-dependent transport systems inner membrane component 0.48 Psyr_1397 DNA-directed DNA polymerase low > 86
Pseudomonas syringae pv. syringae B728a 0.65 Psyr_4862 Binding-protein-dependent transport systems inner membrane component 0.48 Psyr_1397 DNA-directed DNA polymerase low > 86
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_13170 spermidine/putrescine ABC transporter permease 0.46 AO356_05570 DNA polymerase IV low > 104
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS28760 ABC transporter permease subunit 0.46 PFLU_RS24490 DNA polymerase IV low > 109
Pseudomonas fluorescens SBW25 0.65 PFLU_RS28760 ABC transporter permease subunit 0.46 PFLU_RS24490 DNA polymerase IV low > 109
Pseudomonas simiae WCS417 0.65 PS417_27110 spermidine/putrescine ABC transporter permease 0.46 PS417_22830 DNA polymerase IV low > 88
Pseudomonas fluorescens GW456-L13 0.65 PfGW456L13_931 Putrescine transport system permease protein PotH (TC 3.A.1.11.2) 0.34 PfGW456L13_4648 DNA polymerase IV (EC 2.7.7.7) low > 87
Dickeya dadantii 3937 0.63 DDA3937_RS09470 putrescine ABC transporter permease PotH 0.41 DDA3937_RS16575 DNA polymerase IV low > 74
Dickeya dianthicola 67-19 0.63 HGI48_RS09490 putrescine ABC transporter permease PotH 0.41 HGI48_RS16645 DNA polymerase IV low > 71
Dickeya dianthicola ME23 0.63 DZA65_RS09800 putrescine ABC transporter permease PotH 0.41 DZA65_RS17735 DNA polymerase IV low > 75
Enterobacter sp. TBS_079 0.63 MPMX20_01497 Putrescine transport system permease protein PotH 0.40 MPMX20_00921 DNA polymerase IV low > 85
Enterobacter asburiae PDN3 0.62 EX28DRAFT_2097 ABC-type spermidine/putrescine transport system, permease component I 0.40 EX28DRAFT_2657 Nucleotidyltransferase/DNA polymerase involved in DNA repair low > 76
Escherichia coli Nissle 1917 0.62 ECOLIN_RS04560 putrescine ABC transporter permease PotH 0.40 ECOLIN_RS01780 DNA polymerase IV low > 52
Escherichia coli BL21 0.62 ECD_00861 putrescine ABC transporter permease 0.40 ECD_00226 DNA polymerase IV low > 60
Escherichia coli ECOR38 0.62 HEPCGN_02080 potH putrescine ABC transporter permease PotH 0.40 HEPCGN_07825 dinB DNA polymerase IV low > 85
Escherichia fergusonii Becca 0.62 EFB2_03205 Putrescine transport system permease protein PotH 0.40 EFB2_03787 DNA polymerase IV low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_02812 Putrescine transport system permease protein PotH 0.40 OHPLBJKB_03407 DNA polymerase IV low > 73
Klebsiella michiganensis M5al 0.62 BWI76_RS09470 putrescine ABC transporter permease 0.42 BWI76_RS05530 DNA polymerase IV low > 92
Escherichia coli ECRC62 0.61 BNILDI_20575 potH putrescine ABC transporter permease PotH 0.40 BNILDI_00290 dinB DNA polymerase IV — —
Escherichia coli ECOR27 0.61 NOLOHH_22320 potH putrescine ABC transporter permease PotH 0.40 NOLOHH_02095 dinB DNA polymerase IV low > 57
Escherichia coli BW25113 0.61 b0856 potH putrescine transporter subunit: membrane component of ABC superfamily (NCBI) 0.40 b0231 dinB DNA polymerase IV (NCBI) low > 76
Phaeobacter inhibens DSM 17395 0.61 PGA1_c34440 putrescine transport system permease protein PotH 0.28 PGA1_c32470 DNA polymerase IV low > 62
Escherichia coli ECRC99 0.61 KEDOAH_21960 potH putrescine ABC transporter permease PotH 0.40 KEDOAH_18425 dinB DNA polymerase IV — —
Escherichia coli ECRC101 0.61 OKFHMN_05950 potH putrescine ABC transporter permease PotH 0.40 OKFHMN_09730 dinB DNA polymerase IV — —
Escherichia coli ECRC98 0.61 JDDGAC_09585 potH putrescine ABC transporter permease PotH 0.40 JDDGAC_13355 dinB DNA polymerase IV — —
Escherichia coli ECRC102 0.61 NIAGMN_03995 potH putrescine ABC transporter permease PotH 0.40 NIAGMN_07590 dinB DNA polymerase IV — —
Escherichia coli ECRC101 0.61 MCAODC_25165 potH putrescine ABC transporter permease PotH 0.40 MCAODC_00250 dinB DNA polymerase IV — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF760 Putrescine transport system permease protein PotH (TC 3.A.1.11.2) 0.41 GFF4104 DNA polymerase IV (EC 2.7.7.7) low > 78
Pectobacterium carotovorum WPP14 0.59 HER17_RS12490 putrescine ABC transporter permease PotH 0.40 HER17_RS04670 DNA polymerase IV low > 75
Pseudomonas stutzeri RCH2 0.59 Psest_4281 ABC-type spermidine/putrescine transport system, permease component I 0.47 Psest_1304 Nucleotidyltransferase/DNA polymerase involved in DNA repair low > 67
Pantoea sp. MT58 0.58 IAI47_13035 putrescine ABC transporter permease PotH 0.41 IAI47_15175 DNA polymerase IV low > 76
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS23140 putrescine/spermidine ABC transporter permease 0.26 BPHYT_RS29110 DNA-directed DNA polymerase low > 109
Serratia liquefaciens MT49 0.57 IAI46_08380 putrescine ABC transporter permease PotH 0.39 IAI46_04405 DNA polymerase IV low > 86
Paraburkholderia sabiae LMG 24235 0.57 QEN71_RS12955 ABC transporter permease subunit 0.26 QEN71_RS08870 DNA polymerase IV low > 153
Azospirillum sp. SherDot2 0.55 MPMX19_04881 Putrescine transport system permease protein PotH 0.25 MPMX19_05504 DNA polymerase IV low > 112
Rhizobium sp. OAE497 0.55 ABIE40_RS03275 ABC transporter permease subunit 0.33 ABIE40_RS27830 DNA polymerase IV low > 107
Rahnella sp. WP5 0.54 EX31_RS09620 putrescine ABC transporter permease PotH 0.41 EX31_RS21005 DNA polymerase IV low > 89
Paraburkholderia graminis OAS925 0.54 ABIE53_002368 putrescine transport system permease protein 0.25 ABIE53_005211 DNA polymerase-4 low > 113
Azospirillum brasilense Sp245 0.53 AZOBR_RS08835 putrescine/spermidine ABC transporter permease 0.29 AZOBR_RS21200 DNA polymerase IV low > 97
Sinorhizobium meliloti 1021 0.52 SMc00772 putrescine ABC transporter permease 0.35 SMa2355 DNA polymerase IV low > 103
Agrobacterium fabrum C58 0.50 Atu0611 ABC transporter, membrane spanning protein 0.35 Atu5469 DNA polymerase IV low > 89
Castellaniella sp019104865 MT123 0.50 ABCV34_RS02370 ABC transporter permease subunit 0.25 ABCV34_RS12020 DNA polymerase IV low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF2033 Putrescine transport system permease protein PotH (TC 3.A.1.11.2) 0.24 GFF728 DNA polymerase IV (EC 2.7.7.7) low > 90

Not shown: 6 genomes with orthologs for HP15_938 only; 33 genomes with orthologs for HP15_737 only