Conservation of cofitness between GFF3369 and GFF6777 in Variovorax sp. SCN45

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF3369 1,4-dihydroxy-2-naphthoyl-CoA hydrolase (EC 3.1.2.28) in menaquinone biosynthesis 1.0 GFF6777 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) 0.70 9
Variovorax sp. OAS795 0.95 ABID97_RS03015 hotdog fold thioesterase 0.92 ABID97_RS21180 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.80 GFF2002 uncharacterized domain 1 0.46 GFF4371 ABC transporter related low > 90
Marinobacter adhaerens HP15 0.60 HP15_4051 phenylacetic acid degradation-related protein, thioesterase superfamily 0.48 HP15_2955 ATP-binding component of ABC transporter low > 73
Dyella japonica UNC79MFTsu3.2 0.56 ABZR86_RS16920 hotdog fold thioesterase 0.47 ABZR86_RS13045 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC low > 74
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS01500 hypothetical protein 0.62 RR42_RS18590 hypothetical protein low > 128
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_16735 esterase 0.49 OKGIIK_15455 malK ABC-type sugar transport system, ATPase component MalK low > 52
Rhodanobacter denitrificans FW104-10B01 0.51 LRK54_RS06895 hotdog fold thioesterase 0.49 LRK54_RS08690 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC low > 59
Lysobacter sp. OAE881 0.49 ABIE51_RS01500 hotdog fold thioesterase 0.48 ABIE51_RS08870 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
Erwinia tracheiphila SCR3 0.49 LU632_RS11045 hotdog fold thioesterase 0.50 LU632_RS00805 ugpC sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC low > 74
Rhodanobacter denitrificans MT42 0.49 LRK55_RS06640 hotdog fold thioesterase 0.49 LRK55_RS08455 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
Serratia liquefaciens MT49 0.48 IAI46_11135 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.51 IAI46_11750 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC low > 86
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.235.1 ComA operon protein 2 0.48 Xcc-8004.2451.1 Multiple sugar ABC transporter, ATP-binding protein low > 74
Enterobacter asburiae PDN3 0.47 EX28DRAFT_1695 uncharacterized domain 1 0.50 EX28DRAFT_4282 ABC-type sugar transport systems, ATPase components low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_02038 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.49 OHPLBJKB_02364 sn-glycerol-3-phosphate import ATP-binding protein UgpC low > 73
Escherichia coli ECOR27 0.47 NOLOHH_17755 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.50 NOLOHH_20025 ycjV Uncharacterized ABC transporter ATP-binding protein YcjV low > 75
Escherichia coli ECRC101 0.47 MCAODC_18175 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.50 MCAODC_15940 ycjV Uncharacterized ABC transporter ATP-binding protein YcjV low > 87
Escherichia fergusonii Becca 0.47 EFB2_02306 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.49 EFB2_02609 Oligosaccharides import ATP-binding protein MsmX low > 86
Escherichia coli ECRC102 0.47 NIAGMN_00830 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.50 NIAGMN_26500 ycjV Uncharacterized ABC transporter ATP-binding protein YcjV
Escherichia coli ECRC62 0.47 BNILDI_16545 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.50 BNILDI_18175 ycjV Uncharacterized ABC transporter ATP-binding protein YcjV low > 75
Escherichia coli ECRC100 0.47 OKFHMN_27235 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.50 OKFHMN_02330 ycjV Uncharacterized ABC transporter ATP-binding protein YcjV low > 80
Escherichia coli ECRC99 0.47 KEDOAH_00875 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.50 KEDOAH_26445 ycjV Uncharacterized ABC transporter ATP-binding protein YcjV
Escherichia coli ECRC98 0.47 JDDGAC_01810 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.50 JDDGAC_04875 ycjV Uncharacterized ABC transporter ATP-binding protein YcjV low > 86
Escherichia coli BL21 0.47 ECD_01655 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.49 ECD_01295 putative sugar transport protein
Escherichia coli Nissle 1917 0.47 ECOLIN_RS09425 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.49 ECOLIN_RS07920 ABC transporter ATP-binding protein
Escherichia coli ECOR38 0.46 HEPCGN_05620 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.50 HEPCGN_25860 ycjV Uncharacterized ABC transporter ATP-binding protein YcjV low > 87
Enterobacter sp. TBS_079 0.46 MPMX20_01927 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.50 MPMX20_04326 sn-glycerol-3-phosphate import ATP-binding protein UgpC low > 85
Rahnella sp. WP5 0.45 EX31_RS13920 hotdog fold thioesterase 0.51 EX31_RS07065 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC low > 89
Klebsiella michiganensis M5al 0.45 BWI76_RS17045 hypothetical protein 0.52 BWI76_RS17830 ABC transporter ATP-binding protein low > 92
Pseudomonas sp. RS175 0.44 PFR28_03073 Putative esterase 0.50 PFR28_00569 sn-glycerol-3-phosphate import ATP-binding protein UgpC low > 88
Pseudomonas simiae WCS417 0.44 PS417_09020 esterase 0.48 PS417_22130 glucose/xylose ABC transporter, ATPase component (from data) low > 88
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_19810 esterase 0.49 AO356_05180 sugar ABC transporter ATP-binding protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_5878 FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein 0.50 Pf6N2E2_2889 Glucose ABC transporter, ATP-binding subunit (EC 3.6.3.-) low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_2025 Phenylacetic acid degradation-related protein 0.50 Psyr_1116 glucose ABC transporter ATP-binding protein low > 86
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_2025 Phenylacetic acid degradation-related protein 0.50 Psyr_1116 glucose ABC transporter ATP-binding protein low > 86
Pseudomonas fluorescens SBW25 0.43 PFLU_RS09075 hotdog fold thioesterase 0.49 PFLU_RS23745 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC low > 109
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS09075 hotdog fold thioesterase 0.49 PFLU_RS23745 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC low > 109
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_2050 FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein 0.48 PfGW456L13_1897 ABC transporter for D-Galactose and D-Glucose, ATPase component (from data) low > 87
Pseudomonas stutzeri RCH2 0.42 Psest_2468 uncharacterized domain 1 0.51 Psest_1899 ABC-type sugar transport systems, ATPase components low > 67
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_01715 esterase 0.48 AO353_03380 sugar ABC transporter ATP-binding protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_3522 FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein 0.49 Pf1N1B4_593 Glucose ABC transporter, ATP-binding subunit (EC 3.6.3.-)
Mycobacterium tuberculosis H37Rv 0.28 Rv1847 Conserved protein 0.44 Rv1238 Probable sugar-transport ATP-binding protein ABC transporter SugC low > 58
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_00147 uncharacterized domain 1-containing protein 0.52 H281DRAFT_03749 carbohydrate ABC transporter ATP-binding protein, CUT1 family low > 103
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS04910 phenylacetic acid degradation protein 0.53 BPHYT_RS35680 sugar ABC transporter ATP-binding protein
Paraburkholderia graminis OAS925 0.20 ABIE53_001257 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.52 ABIE53_004500 multiple sugar transport system ATP-binding protein low > 113
Rhodopseudomonas palustris CGA009 0.19 TX73_015695 PaaI family thioesterase 0.63 TX73_017965 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC low > 86
Paraburkholderia sabiae LMG 24235 0.19 QEN71_RS25080 PaaI family thioesterase 0.53 QEN71_RS15885 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC low > 153

Not shown: 17 genomes with orthologs for GFF3369 only; 15 genomes with orthologs for GFF6777 only