Conservation of cofitness between GFF4305 and GFF603 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF4305 tRNA-guanine transglycosylase (EC 2.4.2.29) 1.0 GFF603 NfuA Fe-S protein maturation 0.81 9
Enterobacter sp. TBS_079 0.99 MPMX20_00997 Queuine tRNA-ribosyltransferase 0.96 MPMX20_04301 Fe/S biogenesis protein NfuA low > 85
Klebsiella michiganensis M5al 0.99 BWI76_RS06300 tRNA guanosine(34) transglycosylase Tgt 0.95 BWI76_RS26620 Fe-S biogenesis protein NfuA
Enterobacter asburiae PDN3 0.99 EX28DRAFT_2565 tRNA-guanine transglycosylase 0.98 EX28DRAFT_4128 IscR-regulated protein YhgI
Escherichia coli BW25113 0.98 b0406 tgt queuine tRNA-ribosyltransferase (NCBI) 0.99 b3414 gntY predicted gluconate transport associated protein (NCBI) low > 76
Escherichia coli ECOR27 0.98 NOLOHH_01440 tgt tRNA guanosine(34) transglycosylase Tgt 0.99 NOLOHH_08775 NfuA family Fe-S biogenesis protein low > 75
Escherichia coli ECRC99 0.98 KEDOAH_19460 tgt tRNA guanosine(34) transglycosylase Tgt 0.99 KEDOAH_11150 NfuA family Fe-S biogenesis protein
Escherichia coli ECRC101 0.98 MCAODC_27730 tgt tRNA guanosine(34) transglycosylase Tgt 0.99 MCAODC_07520 NfuA family Fe-S biogenesis protein low > 87
Escherichia coli ECRC100 0.98 OKFHMN_08505 tgt tRNA guanosine(34) transglycosylase Tgt 0.99 OKFHMN_16990 NfuA family Fe-S biogenesis protein low > 80
Escherichia coli ECOR38 0.98 HEPCGN_07145 tgt tRNA guanosine(34) transglycosylase Tgt 0.99 HEPCGN_15800 NfuA family Fe-S biogenesis protein 0.82 43
Escherichia coli ECRC102 0.98 NIAGMN_06560 tgt tRNA guanosine(34) transglycosylase Tgt 0.99 NIAGMN_14760 NfuA family Fe-S biogenesis protein
Escherichia coli ECRC62 0.98 BNILDI_22855 tgt tRNA guanosine(34) transglycosylase Tgt 0.99 BNILDI_02740 NfuA family Fe-S biogenesis protein low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.98 OHPLBJKB_03270 Queuine tRNA-ribosyltransferase 0.99 OHPLBJKB_00289 Fe/S biogenesis protein NfuA low > 73
Escherichia fergusonii Becca 0.98 EFB2_03651 Queuine tRNA-ribosyltransferase 0.99 EFB2_00414 Fe/S biogenesis protein NfuA low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS02445 tRNA guanosine(34) transglycosylase Tgt 0.99 ECOLIN_RS19500 Fe-S biogenesis protein NfuA
Escherichia coli BL21 0.98 ECD_00354 tRNA-guanine transglycosylase 0.99 ECD_03266 Fe/S biogenesis protein, putative scaffold/chaperone protein low > 61
Escherichia coli ECRC98 0.98 JDDGAC_12160 tgt tRNA guanosine(34) transglycosylase Tgt 0.99 JDDGAC_20620 NfuA family Fe-S biogenesis protein low > 86
Pantoea sp. MT58 0.95 IAI47_14805 tRNA guanosine(34) transglycosylase Tgt 0.89 IAI47_01780 Fe-S biogenesis protein NfuA low > 76
Dickeya dadantii 3937 0.93 DDA3937_RS05470 tRNA guanosine(34) transglycosylase Tgt 0.91 DDA3937_RS19655 Fe-S biogenesis protein NfuA
Dickeya dianthicola 67-19 0.92 HGI48_RS05530 tRNA guanosine(34) transglycosylase Tgt 0.91 HGI48_RS19785 Fe-S biogenesis protein NfuA low > 71
Dickeya dianthicola ME23 0.92 DZA65_RS05855 tRNA guanosine(34) transglycosylase Tgt 0.91 DZA65_RS20875 Fe-S biogenesis protein NfuA low > 75
Rahnella sp. WP5 0.92 EX31_RS22095 tRNA guanosine(34) transglycosylase Tgt 0.89 EX31_RS04925 Fe-S biogenesis protein NfuA 0.43 74
Pectobacterium carotovorum WPP14 0.92 HER17_RS15990 tRNA guanosine(34) transglycosylase Tgt 0.91 HER17_RS01545 Fe-S biogenesis protein NfuA low > 75
Erwinia tracheiphila SCR3 0.92 LU632_RS18500 tgt tRNA guanosine(34) transglycosylase Tgt 0.88 LU632_RS22985 nfuA Fe-S biogenesis protein NfuA
Serratia liquefaciens MT49 0.92 IAI46_04840 tRNA guanosine(34) transglycosylase Tgt 0.91 IAI46_23835 Fe-S biogenesis protein NfuA low > 86
Shewanella loihica PV-4 0.86 Shew_2337 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.77 Shew_0106 putative DNA uptake protein (RefSeq)
Shewanella sp. ANA-3 0.85 Shewana3_1435 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.76 Shewana3_4003 putative DNA uptake protein (RefSeq)
Vibrio cholerae E7946 ATCC 55056 0.85 CSW01_03850 tRNA guanosine(34) transglycosylase Tgt 0.77 CSW01_13725 Fe-S biogenesis protein NfuA
Shewanella oneidensis MR-1 0.85 SO3113 tgt queuine tRNA-ribosyltransferase (NCBI ptt file) 0.77 SO4619 yhgI yhgI protein (NCBI ptt file)
Shewanella amazonensis SB2B 0.85 Sama_2193 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.73 Sama_3502 putative DNA uptake protein (RefSeq)
Alteromonas macleodii MIT1002 0.77 MIT1002_02813 Queuine tRNA-ribosyltransferase 0.78 MIT1002_04019 Fe/S biogenesis protein NfuA
Pseudomonas sp. S08-1 0.75 OH686_17430 tRNA-guanine transglycosylase 0.51 OH686_03315 [4Fe-4S] cluster carrier protein NfuA
Pseudomonas stutzeri RCH2 0.73 Psest_1242 tRNA-guanine transglycosylase, queuosine-34-forming 0.51 Psest_2104 IscR-regulated protein YhgI low > 67
Pseudomonas sp. RS175 0.73 PFR28_00277 Queuine tRNA-ribosyltransferase 0.49 PFR28_01371 Fe/S biogenesis protein NfuA
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_15790 queuine tRNA-ribosyltransferase 0.48 AO353_21625 Fe/S biogenesis protein NfuA
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_4882 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.49 PfGW456L13_2849 NfuA Fe-S protein maturation
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_3006 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.48 Pf1N1B4_5659 NfuA Fe-S protein maturation 0.62 3
Marinobacter adhaerens HP15 0.72 HP15_1479 queuine tRNA-ribosyltransferase 0.53 HP15_1791 yhgI protein
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_06690 queuine tRNA-ribosyltransferase 0.49 AO356_00535 Fe/S biogenesis protein NfuA
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_1228 tRNA-guanine transglycosylase 0.45 Psyr_2466 HesB/YadR/YfhF:Nitrogen-fixing NifU, C-terminal
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_1228 tRNA-guanine transglycosylase 0.45 Psyr_2466 HesB/YadR/YfhF:Nitrogen-fixing NifU, C-terminal
Kangiella aquimarina DSM 16071 0.72 B158DRAFT_2516 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.63 B158DRAFT_0853 IscR-regulated protein YhgI
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_3198 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.49 Pf6N2E2_2066 NfuA Fe-S protein maturation
Pseudomonas putida KT2440 0.72 PP_0833 queuine tRNA-ribosyltransferase 0.50 PP_2378 Fe/S biogenesis protein NfuA low > 96
Pseudomonas simiae WCS417 0.72 PS417_23245 queuine tRNA-ribosyltransferase 0.48 PS417_12320 amino acid ABC transporter substrate-binding protein
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS24900 tRNA guanosine(34) transglycosylase Tgt 0.49 PFLU_RS13010 Fe-S biogenesis protein NfuA 0.30 91
Pseudomonas fluorescens SBW25 0.72 PFLU_RS24900 tRNA guanosine(34) transglycosylase Tgt 0.49 PFLU_RS13010 Fe-S biogenesis protein NfuA low > 109
Acinetobacter radioresistens SK82 0.68 MPMX26_00438 Queuine tRNA-ribosyltransferase 0.45 MPMX26_02345 Fe/S biogenesis protein NfuA
Dyella japonica UNC79MFTsu3.2 0.66 ABZR86_RS09540 tRNA guanosine(34) transglycosylase Tgt 0.46 ABZR86_RS02740 NfuA family Fe-S biogenesis protein low > 74
Rhodanobacter denitrificans MT42 0.66 LRK55_RS02880 tRNA guanosine(34) transglycosylase Tgt 0.45 LRK55_RS17760 NfuA family Fe-S biogenesis protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.66 LRK54_RS03130 tRNA guanosine(34) transglycosylase Tgt 0.45 LRK54_RS17905 NfuA family Fe-S biogenesis protein low > 59
Lysobacter sp. OAE881 0.65 ABIE51_RS15020 tRNA guanosine(34) transglycosylase Tgt 0.43 ABIE51_RS11785 NfuA family Fe-S biogenesis protein
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_10000 tgt tRNA guanosine(34) transglycosylase Tgt 0.45 OKGIIK_07395 NfuA family Fe-S biogenesis protein
Xanthomonas campestris pv. campestris strain 8004 0.64 Xcc-8004.2168.1 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.44 Xcc-8004.2620.1 NfuA Fe-S protein maturation 0.45 5

Not shown: 46 genomes with orthologs for GFF4305 only; 0 genomes with orthologs for GFF603 only