Conservation of cofitness between GFF122 and GFF603 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF122 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 1.0 GFF603 NfuA Fe-S protein maturation 0.87 8
Escherichia coli Nissle 1917 0.97 ECOLIN_RS00640 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.99 ECOLIN_RS19500 Fe-S biogenesis protein NfuA 0.68 27
Escherichia coli ECOR27 0.97 NOLOHH_02845 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.99 NOLOHH_08775 NfuA family Fe-S biogenesis protein
Escherichia coli ECRC62 0.97 BNILDI_08765 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.99 BNILDI_02740 NfuA family Fe-S biogenesis protein
Escherichia coli ECRC98 0.97 JDDGAC_14095 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.99 JDDGAC_20620 NfuA family Fe-S biogenesis protein
Escherichia coli ECRC99 0.97 KEDOAH_17655 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.99 KEDOAH_11150 NfuA family Fe-S biogenesis protein
Escherichia coli HS(pFamp)R (ATCC 700891) 0.97 OHPLBJKB_03547 Pyruvate dehydrogenase E1 component 0.99 OHPLBJKB_00289 Fe/S biogenesis protein NfuA
Escherichia coli BW25113 0.97 b0114 aceE pyruvate dehydrogenase subunit E1 (NCBI) 0.99 b3414 gntY predicted gluconate transport associated protein (NCBI) low > 76
Escherichia coli ECRC102 0.97 NIAGMN_08350 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.99 NIAGMN_14760 NfuA family Fe-S biogenesis protein
Escherichia coli ECRC101 0.97 MCAODC_01015 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.99 MCAODC_07520 NfuA family Fe-S biogenesis protein
Escherichia coli ECRC101 0.97 OKFHMN_10500 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.99 OKFHMN_16990 NfuA family Fe-S biogenesis protein
Escherichia fergusonii Becca 0.97 EFB2_03931 Pyruvate dehydrogenase E1 component 0.99 EFB2_00414 Fe/S biogenesis protein NfuA low > 86
Escherichia coli BL21 0.97 ECD_00113 pyruvate dehydrogenase, decarboxylase component E1, thiamine triphosphate-binding 0.99 ECD_03266 Fe/S biogenesis protein, putative scaffold/chaperone protein
Escherichia coli ECOR38 0.97 HEPCGN_08480 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.99 HEPCGN_15800 NfuA family Fe-S biogenesis protein 0.93 18
Enterobacter asburiae PDN3 0.97 EX28DRAFT_3710 pyruvate dehydrogenase E1 component, homodimeric type 0.98 EX28DRAFT_4128 IscR-regulated protein YhgI
Klebsiella michiganensis M5al 0.96 BWI76_RS04880 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.95 BWI76_RS26620 Fe-S biogenesis protein NfuA
Enterobacter sp. TBS_079 0.96 MPMX20_00807 Pyruvate dehydrogenase E1 component 0.96 MPMX20_04301 Fe/S biogenesis protein NfuA low > 85
Pectobacterium carotovorum WPP14 0.93 HER17_RS03290 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.91 HER17_RS01545 Fe-S biogenesis protein NfuA
Erwinia tracheiphila SCR3 0.92 LU632_RS03080 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.88 LU632_RS22985 nfuA Fe-S biogenesis protein NfuA
Dickeya dianthicola 67-19 0.92 HGI48_RS17850 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.91 HGI48_RS19785 Fe-S biogenesis protein NfuA
Dickeya dianthicola ME23 0.92 DZA65_RS19000 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.91 DZA65_RS20875 Fe-S biogenesis protein NfuA
Dickeya dadantii 3937 0.92 DDA3937_RS17925 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.91 DDA3937_RS19655 Fe-S biogenesis protein NfuA
Pantoea sp. MT58 0.92 IAI47_15810 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.89 IAI47_01780 Fe-S biogenesis protein NfuA low > 76
Rahnella sp. WP5 0.92 EX31_RS03480 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.89 EX31_RS04925 Fe-S biogenesis protein NfuA 0.78 36
Serratia liquefaciens MT49 0.91 IAI46_21325 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.91 IAI46_23835 Fe-S biogenesis protein NfuA low > 86
Vibrio cholerae E7946 ATCC 55056 0.73 CSW01_12220 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.77 CSW01_13725 Fe-S biogenesis protein NfuA
Shewanella amazonensis SB2B 0.73 Sama_0375 aceE pyruvate dehydrogenase subunit E1 (RefSeq) 0.73 Sama_3502 putative DNA uptake protein (RefSeq)
Shewanella sp. ANA-3 0.69 Shewana3_0426 aceE pyruvate dehydrogenase subunit E1 (RefSeq) 0.76 Shewana3_4003 putative DNA uptake protein (RefSeq)
Shewanella loihica PV-4 0.69 Shew_3431 aceE pyruvate dehydrogenase subunit E1 (RefSeq) 0.77 Shew_0106 putative DNA uptake protein (RefSeq)
Shewanella oneidensis MR-1 0.69 SO0424 aceE pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase (NCBI ptt file) 0.77 SO4619 yhgI yhgI protein (NCBI ptt file)
Alteromonas macleodii MIT1002 0.66 MIT1002_03003 Pyruvate dehydrogenase E1 component 0.78 MIT1002_04019 Fe/S biogenesis protein NfuA
Kangiella aquimarina DSM 16071 0.64 B158DRAFT_2144 pyruvate dehydrogenase E1 component, homodimeric type 0.63 B158DRAFT_0853 IscR-regulated protein YhgI
Pseudomonas putida KT2440 0.60 PP_0339 Pyruvate dehydrogenase E1 component 0.50 PP_2378 Fe/S biogenesis protein NfuA low > 96
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_1476 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.48 Pf1N1B4_5659 NfuA Fe-S protein maturation
Pseudomonas fluorescens GW456-L13 0.60 PfGW456L13_214 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.49 PfGW456L13_2849 NfuA Fe-S protein maturation
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_0518 2-oxo-acid dehydrogenase E1 component homodimeric type 0.45 Psyr_2466 HesB/YadR/YfhF:Nitrogen-fixing NifU, C-terminal
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_0518 2-oxo-acid dehydrogenase E1 component homodimeric type 0.45 Psyr_2466 HesB/YadR/YfhF:Nitrogen-fixing NifU, C-terminal
Pseudomonas sp. S08-1 0.60 OH686_09710 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.51 OH686_03315 [4Fe-4S] cluster carrier protein NfuA
Pseudomonas sp. RS175 0.60 PFR28_05061 Pyruvate dehydrogenase E1 component 0.49 PFR28_01371 Fe/S biogenesis protein NfuA
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_08960 pyruvate dehydrogenase 0.49 AO356_00535 Fe/S biogenesis protein NfuA
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_3674 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.49 Pf6N2E2_2066 NfuA Fe-S protein maturation
Pseudomonas fluorescens SBW25 0.60 PFLU_RS02275 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.49 PFLU_RS13010 Fe-S biogenesis protein NfuA low > 109
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS02275 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.49 PFLU_RS13010 Fe-S biogenesis protein NfuA low > 109
Pseudomonas simiae WCS417 0.60 PS417_02220 pyruvate dehydrogenase 0.48 PS417_12320 amino acid ABC transporter substrate-binding protein
Pseudomonas stutzeri RCH2 0.60 Psest_0448 pyruvate dehydrogenase E1 component, homodimeric type 0.51 Psest_2104 IscR-regulated protein YhgI
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_12865 pyruvate dehydrogenase 0.48 AO353_21625 Fe/S biogenesis protein NfuA
Lysobacter sp. OAE881 0.58 ABIE51_RS18795 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.43 ABIE51_RS11785 NfuA family Fe-S biogenesis protein
Acinetobacter radioresistens SK82 0.57 MPMX26_02925 Pyruvate dehydrogenase E1 component 0.45 MPMX26_02345 Fe/S biogenesis protein NfuA
Xanthomonas campestris pv. campestris strain 8004 0.57 Xcc-8004.754.1 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.44 Xcc-8004.2620.1 NfuA Fe-S protein maturation
Marinobacter adhaerens HP15 0.57 HP15_3046 pyruvate dehydrogenase subunit E1 0.53 HP15_1791 yhgI protein
Dyella japonica UNC79MFTsu3.2 0.57 ABZR86_RS12410 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.46 ABZR86_RS02740 NfuA family Fe-S biogenesis protein low > 74
Rhodanobacter sp. FW510-T8 0.54 OKGIIK_12700 aceE pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.45 OKGIIK_07395 NfuA family Fe-S biogenesis protein
Rhodanobacter denitrificans MT42 0.53 LRK55_RS10880 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.45 LRK55_RS17760 NfuA family Fe-S biogenesis protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS11175 pyruvate dehydrogenase (acetyl-transferring), homodimeric type 0.45 LRK54_RS17905 NfuA family Fe-S biogenesis protein low > 59

Not shown: 23 genomes with orthologs for GFF122 only; 0 genomes with orthologs for GFF603 only