Conservation of cofitness between GFF3835 and GFF5731 in Hydrogenophaga sp. GW460-11-11-14-LB1

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF3835 Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) 1.0 GFF5731 3'-to-5' oligoribonuclease (orn) 0.67 16
Variovorax sp. SCN45 0.75 GFF2868 Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) 0.78 GFF3960 3'-to-5' oligoribonuclease (orn) low > 127
Variovorax sp. OAS795 0.74 ABID97_RS10600 D-glycerate dehydrogenase 0.77 ABID97_RS08790 oligoribonuclease low > 91
Acidovorax sp. GW101-3H11 0.73 Ac3H11_2599 Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) 0.75 Ac3H11_1677 3'-to-5' oligoribonuclease (orn) low > 79
Cupriavidus basilensis FW507-4G11 0.66 RR42_RS14190 2-hydroxyacid dehydrogenase 0.63 RR42_RS14770 oligoribonuclease
Ralstonia solanacearum GMI1000 0.64 RS_RS21645 D-glycerate dehydrogenase 0.64 RS_RS04685 oligoribonuclease
Ralstonia solanacearum PSI07 0.62 RPSI07_RS02805 D-glycerate dehydrogenase 0.64 RPSI07_RS19520 oligoribonuclease
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS04460 D-glycerate dehydrogenase 0.63 QEN71_RS04255 oligoribonuclease
Burkholderia phytofirmans PsJN 0.61 BPHYT_RS14520 2-hydroxyacid dehydrogenase 0.61 BPHYT_RS14720 oligoribonuclease
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS10055 D-glycerate dehydrogenase 0.62 ABZR87_RS09645 oligoribonuclease
Paraburkholderia graminis OAS925 0.60 ABIE53_003066 gluconate 2-dehydrogenase 0.62 ABIE53_003119 oligoribonuclease
Paraburkholderia bryophila 376MFSha3.1 0.60 H281DRAFT_04333 Lactate dehydrogenase 0.61 H281DRAFT_04301 oligoribonuclease
Herbaspirillum seropedicae SmR1 0.60 HSERO_RS08110 2-hydroxyacid dehydrogenase 0.62 HSERO_RS07210 oligoribonuclease
Ralstonia solanacearum IBSBF1503 0.58 RALBFv3_RS14340 D-glycerate dehydrogenase 0.64 RALBFv3_RS13950 oligoribonuclease
Ralstonia solanacearum UW163 0.58 UW163_RS11805 D-glycerate dehydrogenase 0.64 UW163_RS15860 oligoribonuclease
Xanthomonas campestris pv. campestris strain 8004 0.56 Xcc-8004.1956.1 Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) 0.47 Xcc-8004.2410.1 3'-to-5' oligoribonuclease (orn)
Lysobacter sp. OAE881 0.52 ABIE51_RS08225 D-glycerate dehydrogenase 0.46 ABIE51_RS09510 oligoribonuclease
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS08035 D-glycerate dehydrogenase 0.45 ABZR86_RS01910 oligoribonuclease
Rhodanobacter sp. FW510-T8 0.50 OKGIIK_04810 D-glycerate dehydrogenase 0.45 OKGIIK_07465 orn oligoribonuclease
Pseudomonas simiae WCS417 0.38 PS417_12555 phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data) 0.53 PS417_02450 oligoribonuclease
Pseudomonas sp. RS175 0.36 PFR28_01596 Glyoxylate/hydroxypyruvate reductase B 0.52 PFR28_05113 Oligoribonuclease
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_5310 Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) 0.52 Pf6N2E2_3622 3'-to-5' oligoribonuclease (orn)
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_2948 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) 0.51 PfGW456L13_162 3'-to-5' oligoribonuclease (orn)
Pseudomonas putida KT2440 0.36 PP_3376 putative phosphonate dehydrogenase 0.53 PP_4902 Oligoribonuclease low > 96
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_16925 bifunctional glyoxylate/hydroxypyruvate reductase B 0.53 AO356_08695 oligoribonuclease
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_1043 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein 0.51 Psyr_0564 Exonuclease
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_1043 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein 0.51 Psyr_0564 Exonuclease
Klebsiella michiganensis M5al 0.34 BWI76_RS26960 bifunctional glyoxylate/hydroxypyruvate reductase B 0.56 BWI76_RS02480 oligoribonuclease
Pantoea sp. MT58 0.34 IAI47_00110 glyoxylate/hydroxypyruvate reductase GhrB 0.55 IAI47_02540 oligoribonuclease
Enterobacter sp. TBS_079 0.34 MPMX20_00177 Glyoxylate/hydroxypyruvate reductase B 0.56 MPMX20_00443 Oligoribonuclease
Dickeya dianthicola ME23 0.34 DZA65_RS00195 glyoxylate/hydroxypyruvate reductase GhrB 0.54 DZA65_RS20150 oligoribonuclease
Serratia liquefaciens MT49 0.33 IAI46_00085 glyoxylate/hydroxypyruvate reductase GhrB 0.55 IAI46_01575 oligoribonuclease
Dickeya dianthicola 67-19 0.33 HGI48_RS00175 glyoxylate/hydroxypyruvate reductase GhrB 0.54 HGI48_RS19035 oligoribonuclease
Escherichia coli Nissle 1917 0.33 ECOLIN_RS20330 glyoxylate/hydroxypyruvate reductase GhrB 0.56 ECOLIN_RS24180 oligoribonuclease
Escherichia coli ECRC101 0.33 MCAODC_06535 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.56 MCAODC_02825 orn oligoribonuclease
Escherichia coli ECRC98 0.33 JDDGAC_19650 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.56 JDDGAC_15950 orn oligoribonuclease
Escherichia coli ECRC99 0.33 KEDOAH_12130 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.56 KEDOAH_15850 orn oligoribonuclease
Escherichia coli ECRC102 0.33 NIAGMN_13780 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.56 NIAGMN_10160 orn oligoribonuclease
Escherichia fergusonii Becca 0.33 EFB2_00254 Glyoxylate/hydroxypyruvate reductase B 0.56 EFB2_04373 Oligoribonuclease
Escherichia coli ECOR27 0.33 NOLOHH_07965 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.56 NOLOHH_04575 orn oligoribonuclease
Escherichia coli ECRC101 0.33 OKFHMN_16020 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.56 OKFHMN_12315 orn oligoribonuclease
Escherichia coli ECRC62 0.33 BNILDI_03580 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.56 BNILDI_06915 orn oligoribonuclease
Escherichia coli BL21 0.33 ECD_03403 glyoxylate/hydroxypyruvate reductase B 0.56 ECD_04032 oligoribonuclease
Escherichia coli BW25113 0.33 b3553 yiaE putative dehydrogenase (VIMSS) 0.56 b4162 yjeR orf, hypothetical protein (VIMSS)
Acinetobacter radioresistens SK82 0.33 MPMX26_01125 Glyoxylate/hydroxypyruvate reductase B 0.50 MPMX26_02630 Oligoribonuclease
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_00153 Glyoxylate/hydroxypyruvate reductase B 0.56 OHPLBJKB_03880 Oligoribonuclease
Escherichia coli ECOR38 0.33 HEPCGN_14910 ghrB glyoxylate/hydroxypyruvate reductase GhrB 0.56 HEPCGN_10540 orn oligoribonuclease
Pectobacterium carotovorum WPP14 0.32 HER17_RS21175 glyoxylate/hydroxypyruvate reductase GhrB 0.55 HER17_RS02415 oligoribonuclease
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.32 GFF458 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) 0.55 GFF1989 '3'-to-5' oligoribonuclease (orn)' transl_table=11
Enterobacter asburiae PDN3 0.31 EX28DRAFT_3817 Lactate dehydrogenase and related dehydrogenases 0.55 EX28DRAFT_3360 Oligoribonuclease (3'->5' exoribonuclease)
Rahnella sp. WP5 0.31 EX31_RS05925 glyoxylate/hydroxypyruvate reductase GhrB 0.55 EX31_RS08865 oligoribonuclease
Castellaniella sp019104865 MT123 0.31 ABCV34_RS08615 D-glycerate dehydrogenase 0.65 ABCV34_RS06995 oligoribonuclease
Dickeya dadantii 3937 0.31 DDA3937_RS21080 glyoxylate/hydroxypyruvate reductase GhrB 0.54 DDA3937_RS18940 oligoribonuclease
Vibrio cholerae E7946 ATCC 55056 0.22 CSW01_12695 lactate dehydrogenase 0.51 CSW01_01765 oligoribonuclease
Dechlorosoma suillum PS 0.21 Dsui_0124 lactate dehydrogenase-like oxidoreductase 0.57 Dsui_3222 oligoribonuclease (3'->5' exoribonuclease)

Not shown: 7 genomes with orthologs for GFF3835 only; 17 genomes with orthologs for GFF5731 only