Conservation of cofitness between PS417_22690 and PS417_28220 in Pseudomonas simiae WCS417

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_22690 phosphogluconate dehydratase 1.0 PS417_28220 LysR family transcriptional regulator 0.31 16
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS24330 phosphogluconate dehydratase 0.98 PFLU_RS29885 LysR family transcriptional regulator 0.51 7
Pseudomonas fluorescens SBW25 0.99 PFLU_RS24330 phosphogluconate dehydratase 0.98 PFLU_RS29885 LysR family transcriptional regulator 0.59 18
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_03420 phosphogluconate dehydratase 0.90 AO353_10035 LysR family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_601 Phosphogluconate dehydratase (EC 4.2.1.12) 0.88 Pf1N1B4_2009 LysR family transcriptional regulator PA5437 — —
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_2898 Phosphogluconate dehydratase (EC 4.2.1.12) 0.85 Pf6N2E2_4277 LysR family transcriptional regulator PA5437 — —
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_05220 phosphogluconate dehydratase 0.88 AO356_12015 LysR family transcriptional regulator — —
Pseudomonas fluorescens GW456-L13 0.91 PfGW456L13_1889 Phosphogluconate dehydratase (EC 4.2.1.12) 0.88 PfGW456L13_727 LysR family transcriptional regulator PA5437 low > 87
Pseudomonas sp. RS175 0.91 PFR28_00561 Phosphogluconate dehydratase 0.87 PFR28_04519 HTH-type transcriptional activator CmpR 0.23 56
Pseudomonas syringae pv. syringae B728a ΔmexB 0.88 Psyr_1109 6-phosphogluconate dehydratase 0.81 Psyr_5062 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a 0.88 Psyr_1109 6-phosphogluconate dehydratase 0.81 Psyr_5062 transcriptional regulator, LysR family 0.68 4
Pseudomonas putida KT2440 0.87 PP_1010 phosphogluconate dehydratase 0.83 PP_5348 Transcriptional regulator, LysR family — —
Pseudomonas sp. S08-1 0.81 OH686_02490 phosphogluconate dehydratase 0.68 OH686_13195 Transcriptional regulator, LysR family low > 80
Pseudomonas stutzeri RCH2 0.79 Psest_1892 6-phosphogluconate dehydratase 0.72 Psest_4086 Transcriptional regulator low > 67
Shewanella oneidensis MR-1 0.64 SO2487 edd 6-phosphogluconate dehydratase (NCBI ptt file) 0.24 SO3757 rbcR rubisco operon transcriptional regulator (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.64 Shewana3_2149 phosphogluconate dehydratase (RefSeq) 0.24 Shewana3_0835 LysR family transcriptional regulator (RefSeq) low > 73
Shewanella loihica PV-4 0.64 Shew_2046 phosphogluconate dehydratase (RefSeq) 0.33 Shew_1245 LysR family transcriptional regulator (RefSeq) — —
Shewanella amazonensis SB2B 0.63 Sama_1810 phosphogluconate dehydratase (RefSeq) 0.25 Sama_0693 RuBisCo operon transcriptional regulator (RefSeq) — —
Burkholderia phytofirmans PsJN 0.61 BPHYT_RS16735 phosphogluconate dehydratase 0.32 BPHYT_RS29890 LysR family transcriptional regulator low > 109
Paraburkholderia graminis OAS925 0.61 ABIE53_003517 phosphogluconate dehydratase 0.33 ABIE53_005522 DNA-binding transcriptional LysR family regulator low > 113
Paraburkholderia bryophila 376MFSha3.1 0.61 H281DRAFT_04278 6-phosphogluconate dehydratase 0.33 H281DRAFT_01292 transcriptional regulator, LysR family — —
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS26920 phosphogluconate dehydratase 0.34 QEN71_RS32870 LysR family transcriptional regulator low > 153
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS37440 phosphogluconate dehydratase 0.30 RR42_RS31340 transcriptional regulator low > 128
Dyella japonica UNC79MFTsu3.2 0.59 ABZR86_RS14690 phosphogluconate dehydratase 0.19 ABZR86_RS13480 LysR family transcriptional regulator low > 74
Rhodanobacter denitrificans FW104-10B01 0.59 LRK54_RS07880 phosphogluconate dehydratase 0.19 LRK54_RS10595 LysR family transcriptional regulator — —
Rhodanobacter denitrificans MT42 0.59 LRK55_RS07610 phosphogluconate dehydratase 0.18 LRK55_RS10235 LysR family transcriptional regulator — —
Sinorhizobium meliloti 1021 0.58 SMc03068 phosphogluconate dehydratase 0.25 SM_b20203 transcriptional regulator — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.58 GFF5495 Phosphogluconate dehydratase (EC 4.2.1.12) 0.31 GFF2192 Cys regulon transcriptional activator CysB — —
Phaeobacter inhibens DSM 17395 0.58 PGA1_c28000 phosphogluconate dehydratase Edd 0.12 PGA1_c02580 putative HTH-type transcriptional regulator pcaQ — —
Xanthomonas campestris pv. campestris strain 8004 0.58 Xcc-8004.2447.1 Phosphogluconate dehydratase (EC 4.2.1.12) 0.18 Xcc-8004.309.1 Chromosome initiation inhibitor low > 74
Azospirillum sp. SherDot2 0.57 MPMX19_05118 Phosphogluconate dehydratase 0.28 MPMX19_02949 HTH-type transcriptional activator CmpR — —
Lysobacter sp. OAE881 0.55 ABIE51_RS01610 phosphogluconate dehydratase 0.19 ABIE51_RS00200 LysR family transcriptional regulator low > 62
Variovorax sp. OAS795 0.55 ABID97_RS21300 phosphogluconate dehydratase 0.29 ABID97_RS24450 LysR family transcriptional regulator low > 91
Acidovorax sp. GW101-3H11 0.55 Ac3H11_2082 Phosphogluconate dehydratase (EC 4.2.1.12) 0.32 Ac3H11_3174 RuBisCO operon transcriptional regulator — —

Not shown: 37 genomes with orthologs for PS417_22690 only; 6 genomes with orthologs for PS417_28220 only