Conservation of cofitness between Psest_0311 and Psest_0514 in Pseudomonas stutzeri RCH2

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0311 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 1.0 Psest_0514 lytic murein transglycosylase B 0.43 4
Pseudomonas sp. S08-1 0.67 OH686_16055 Multidrug efflux system, outer membrane factor lipoprotein 0.68 OH686_09310 lytic murein transglycosylase B low > 80
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_4009 RND efflux system, outer membrane lipoprotein, NodT 0.68 Psyr_4363 membrane-bound lytic murein transglycosylase B low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_4009 RND efflux system, outer membrane lipoprotein, NodT 0.68 Psyr_4363 membrane-bound lytic murein transglycosylase B low > 86
Pseudomonas sp. RS175 0.65 PFR28_00630 putative efflux pump outer membrane protein TtgC 0.69 PFR28_03866 Membrane-bound lytic murein transglycosylase B low > 88
Pseudomonas putida KT2440 0.65 PP_1384 Probable efflux pump outer membrane protein TtgC 0.68 PP_4805 membrane-bound lytic murein transglycosylase B low > 96
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_3245 RND efflux system, outer membrane lipoprotein, NodT family 0.69 Pf1N1B4_2694 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-)
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_4582 RND efflux system, outer membrane lipoprotein CmeC 0.70 PfGW456L13_1362 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 87
Pseudomonas fluorescens FW300-N2E3 0.63 AO353_17290 multidrug transporter 0.70 AO353_06465 lytic transglycosylase low > 101
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_2825 RND efflux system, outer membrane lipoprotein CmeC 0.70 Pf6N2E2_4999 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) 0.32 75
Pseudomonas fluorescens FW300-N2C3 0.63 AO356_04885 multidrug transporter 0.69 AO356_15320 lytic transglycosylase low > 104
Pseudomonas simiae WCS417 0.63 PS417_06765 multidrug transporter 0.71 PS417_24715 lytic transglycosylase
Pseudomonas fluorescens SBW25 0.62 PFLU_RS06800 AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor 0.71 PFLU_RS26645 lytic murein transglycosylase B low > 109
Pseudomonas fluorescens SBW25-INTG 0.62 PFLU_RS06800 AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor 0.71 PFLU_RS26645 lytic murein transglycosylase B low > 109
Herbaspirillum seropedicae SmR1 0.53 HSERO_RS06820 multidrug transporter 0.38 HSERO_RS04945 murein transglycosylase low > 78
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS18290 AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor 0.39 ABZR86_RS17480 lytic murein transglycosylase B low > 74
Ralstonia solanacearum PSI07 0.52 RPSI07_RS03385 AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor 0.31 RPSI07_RS19640 lytic murein transglycosylase B low > 81
Ralstonia solanacearum UW163 0.51 UW163_RS19375 adeC/adeK/oprM family multidrug efflux complex outer membrane factor 0.31 UW163_RS15980 lytic murein transglycosylase B
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS19800 adeC/adeK/oprM family multidrug efflux complex outer membrane factor 0.31 RALBFv3_RS13830 lytic murein transglycosylase B low > 76
Ralstonia solanacearum GMI1000 0.50 RS_RS21025 adeC/adeK/oprM family multidrug efflux complex outer membrane factor 0.31 RS_RS04565 lytic murein transglycosylase B low > 80
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS36970 RND transporter 0.35 RR42_RS04540 lytic transglycosylase low > 128
Rahnella sp. WP5 0.49 EX31_RS13330 efflux transporter outer membrane subunit 0.38 EX31_RS07810 lytic murein transglycosylase B low > 89
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS34590 multidrug transporter 0.33 BPHYT_RS14840 lytic transglycosylase low > 109
Serratia liquefaciens MT49 0.46 IAI46_16730 efflux transporter outer membrane subunit 0.39 IAI46_18155 lytic murein transglycosylase B low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF4245 RND efflux system, outer membrane lipoprotein CmeC 0.39 GFF4695 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 78
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS05320 efflux transporter outer membrane subunit 0.31 ABZR87_RS09520 lytic murein transglycosylase B low > 80
Acidovorax sp. GW101-3H11 0.41 Ac3H11_4447 RND efflux system, outer membrane lipoprotein CmeC 0.33 Ac3H11_3197 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 79
Castellaniella sp019104865 MT123 0.39 ABCV34_RS04220 efflux transporter outer membrane subunit 0.25 ABCV34_RS07050 lytic murein transglycosylase B
Escherichia coli Nissle 1917 0.38 ECOLIN_RS03130 Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC 0.39 ECOLIN_RS15070 lytic murein transglycosylase B
Escherichia fergusonii Becca 0.37 EFB2_03522 Cation efflux system protein CusC 0.39 EFB2_01223 Membrane-bound lytic murein transglycosylase B low > 86
Escherichia coli BW25113 0.36 b0572 cusC copper/silver efflux system, outer membrane component (NCBI) 0.39 b2701 mltB membrane-bound lytic murein transglycosylase B (NCBI) low > 76
Escherichia coli BL21 0.36 ECD_00533 copper/silver efflux system, outer membrane component 0.39 ECD_02551 membrane-bound lytic murein transglycosylase B low > 60
Enterobacter asburiae PDN3 0.36 EX28DRAFT_1166 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 0.39 EX28DRAFT_2790 lytic murein transglycosylase B low > 76
Acinetobacter radioresistens SK82 0.35 MPMX26_00688 Outer membrane protein OprM 0.29 MPMX26_02108 Membrane-bound lytic murein transglycosylase B low > 36
Dickeya dianthicola 67-19 0.35 HGI48_RS03490 Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC 0.37 HGI48_RS03780 lytic murein transglycosylase B low > 71
Shewanella sp. ANA-3 0.35 Shewana3_4297 copper/silver efflux system outer membrane protein CusC (RefSeq) 0.38 Shewana3_0993 lytic murein transglycosylase B (RefSeq) low > 73
Dechlorosoma suillum PS 0.35 Dsui_3183 efflux transporter, outer membrane factor lipoprotein, NodT family 0.36 Dsui_1972 lytic murein transglycosylase B
Dickeya dianthicola ME23 0.35 DZA65_RS03600 efflux transporter outer membrane subunit 0.37 DZA65_RS03910 lytic murein transglycosylase B low > 75
Dickeya dadantii 3937 0.34 DDA3937_RS14115 efflux transporter outer membrane subunit 0.37 DDA3937_RS03745 lytic murein transglycosylase B low > 74
Klebsiella michiganensis M5al 0.33 BWI76_RS27700 multidrug transporter 0.38 BWI76_RS22210 murein transglycosylase B low > 92
Kangiella aquimarina DSM 16071 0.31 B158DRAFT_0732 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 0.41 B158DRAFT_0081 lytic murein transglycosylase B low > 40
Pantoea sp. MT58 0.24 IAI47_12395 efflux transporter outer membrane subunit 0.37 IAI47_04275 lytic murein transglycosylase B low > 76
Shewanella oneidensis MR-1 0.18 SO0822 outer membrane efflux family protein (NCBI ptt file) 0.37 SO1166 membrane-bound lytic transglycosylase, putative (NCBI ptt file) low > 76

Not shown: 37 genomes with orthologs for Psest_0311 only; 7 genomes with orthologs for Psest_0514 only