Conservation of cofitness between PS417_23390 and PS417_23910 in Pseudomonas simiae WCS417

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_23390 ubiquinol oxidase subunit II 1.0 PS417_23910 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.47 8
Pseudomonas fluorescens SBW25 0.99 PFLU_RS25220 ubiquinol oxidase subunit II 0.98 PFLU_RS25750 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS25220 ubiquinol oxidase subunit II 0.98 PFLU_RS25750 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 109
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_4936 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.86 PfGW456L13_1521 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 87
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_15450 ubiquinol oxidase subunit II 0.89 AO353_14385 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 101
Pseudomonas putida KT2440 0.72 PP_0812 cytochrome bo terminal oxidase subunit II 0.85 PP_4699 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_16960 ubiquinol oxidase subunit II 0.87 AO356_16060 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.43 11
Pseudomonas sp. RS175 0.72 PFR28_00242 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.85 PFR28_03721 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 88
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_5317 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.86 Pf6N2E2_5153 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 0.83 Psyr_0828 ketopantoate hydroxymethyltransferase — —
Pseudomonas fluorescens FW300-N1B4 0.70 Pf1N1B4_973 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.87 Pf1N1B4_2854 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 87
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 0.83 Psyr_0828 ketopantoate hydroxymethyltransferase — —
Pantoea sp. MT58 0.58 IAI47_14680 cytochrome o ubiquinol oxidase subunit II 0.55 IAI47_15655 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 76
Ralstonia solanacearum IBSBF1503 0.58 RALBFv3_RS06660 ubiquinol oxidase subunit II 0.58 RALBFv3_RS05315 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Ralstonia solanacearum UW163 0.58 UW163_RS06965 ubiquinol oxidase subunit II 0.58 UW163_RS08310 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Erwinia tracheiphila SCR3 0.57 LU632_RS18375 cyoA cytochrome o ubiquinol oxidase subunit II 0.56 LU632_RS20100 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Pectobacterium carotovorum WPP14 0.57 HER17_RS15875 cytochrome o ubiquinol oxidase subunit II 0.55 HER17_RS05560 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 75
Ralstonia solanacearum PSI07 0.57 RPSI07_RS10565 ubiquinol oxidase subunit II 0.57 RPSI07_RS11985 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Dickeya dianthicola 67-19 0.57 HGI48_RS05660 cytochrome o ubiquinol oxidase subunit II 0.56 HGI48_RS16070 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.51 45
Dickeya dianthicola ME23 0.57 DZA65_RS05985 cytochrome o ubiquinol oxidase subunit II 0.56 DZA65_RS17155 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 75
Dickeya dadantii 3937 0.56 DDA3937_RS05615 cytochrome o ubiquinol oxidase subunit II 0.56 DDA3937_RS15955 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 74
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS02335 ubiquinol oxidase subunit II 0.53 ABZR87_RS00950 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS32600 cytochrome O ubiquinol oxidase subunit II 0.46 RR42_RS17250 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Ralstonia solanacearum GMI1000 0.54 RS_RS14610 ubiquinol oxidase subunit II 0.56 RS_RS13180 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Paraburkholderia sabiae LMG 24235 0.54 QEN71_RS13340 ubiquinol oxidase subunit II 0.56 QEN71_RS26480 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 153
Escherichia coli ECRC98 0.54 JDDGAC_12015 cyoA cytochrome o ubiquinol oxidase subunit II 0.57 JDDGAC_13995 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Escherichia coli Nissle 1917 0.54 ECOLIN_RS02595 cytochrome o ubiquinol oxidase subunit II 0.57 ECOLIN_RS00745 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Escherichia coli ECOR38 0.54 HEPCGN_06975 cyoA cytochrome o ubiquinol oxidase subunit II 0.57 HEPCGN_08375 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 85
Escherichia coli ECRC101 0.54 OKFHMN_08360 cyoA cytochrome o ubiquinol oxidase subunit II 0.57 OKFHMN_10400 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Escherichia coli BW25113 0.54 b0432 cyoA cytochrome o ubiquinol oxidase subunit II (NCBI) 0.57 b0134 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase (NCBI) low > 76
Escherichia coli ECRC102 0.54 NIAGMN_06415 cyoA cytochrome o ubiquinol oxidase subunit II 0.57 NIAGMN_08250 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Escherichia fergusonii Becca 0.54 EFB2_03625 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.57 EFB2_03910 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 86
Escherichia coli ECRC101 0.54 MCAODC_27585 cyoA cytochrome o ubiquinol oxidase subunit II 0.57 MCAODC_00915 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Escherichia coli ECRC99 0.54 KEDOAH_19605 cyoA cytochrome o ubiquinol oxidase subunit II 0.57 KEDOAH_17755 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_03241 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.58 OHPLBJKB_03527 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 73
Escherichia coli ECOR27 0.54 NOLOHH_01295 cyoA cytochrome o ubiquinol oxidase subunit II 0.58 NOLOHH_02745 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 57
Escherichia coli BL21 0.54 ECD_00383 cytochrome o ubiquinol oxidase subunit II 0.57 ECD_00133 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 60
Escherichia coli ECRC62 0.54 BNILDI_22710 cyoA cytochrome o ubiquinol oxidase subunit II 0.58 BNILDI_08925 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS24915 ubiquinol oxidase subunit II 0.54 BPHYT_RS03605 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Shewanella loihica PV-4 0.53 Shew_0366 ubiquinol oxidase, subunit II (RefSeq) 0.57 Shew_3133 3-methyl-2-oxobutanoate hydroxymethyltransferase (RefSeq) — —
Serratia liquefaciens MT49 0.53 IAI46_04985 cytochrome o ubiquinol oxidase subunit II 0.55 IAI46_21240 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.53 GFF4346 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.55 GFF91 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 78
Rahnella sp. WP5 0.53 EX31_RS22220 cytochrome o ubiquinol oxidase subunit II 0.56 EX31_RS03280 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 89
Klebsiella michiganensis M5al 0.53 BWI76_RS06495 cytochrome ubiquinol oxidase subunit II 0.56 BWI76_RS04995 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 92
Enterobacter asburiae PDN3 0.53 EX28DRAFT_2539 cytochrome o ubiquinol oxidase subunit II 0.56 EX28DRAFT_3730 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 76
Enterobacter sp. TBS_079 0.53 MPMX20_01023 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.57 MPMX20_00827 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 85
Paraburkholderia graminis OAS925 0.52 ABIE53_005340 cytochrome o ubiquinol oxidase subunit 2 0.56 ABIE53_000867 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Alteromonas macleodii MIT1002 0.52 MIT1002_03929 Ubiquinol oxidase subunit 2 precursor 0.57 MIT1002_03694 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_03426 cytochrome bo3 quinol oxidase subunit 2 (EC 1.10.3.-) 0.56 H281DRAFT_04703 ketopantoate hydroxymethyltransferase — —
Shewanella sp. ANA-3 0.49 Shewana3_4031 ubiquinol oxidase, subunit II (RefSeq) 0.57 Shewana3_3408 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase (RefSeq) low > 73
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS07625 ubiquinol oxidase subunit II 0.46 ABZR86_RS00815 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS12320 cytochrome O ubiquinol oxidase 0.57 HSERO_RS03085 3-methyl-2-oxobutanoate hydroxymethyltransferase — —
Acinetobacter radioresistens SK82 0.43 MPMX26_01162 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.54 MPMX26_00545 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 36
Acidovorax sp. GW101-3H11 0.41 Ac3H11_3141 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.48 Ac3H11_3839 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 79

Not shown: 2 genomes with orthologs for PS417_23390 only; 28 genomes with orthologs for PS417_23910 only