Conservation of cofitness between PS417_23375 and PS417_23390 in Pseudomonas simiae WCS417

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_23375 cytochrome C oxidase 1.0 PS417_23390 ubiquinol oxidase subunit II 0.85 1
Pseudomonas fluorescens SBW25 1.00 PFLU_RS25205 cytochrome o ubiquinol oxidase subunit IV 0.99 PFLU_RS25220 ubiquinol oxidase subunit II 0.92 3
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS25205 cytochrome o ubiquinol oxidase subunit IV 0.99 PFLU_RS25220 ubiquinol oxidase subunit II 0.90 3
Pseudomonas fluorescens FW300-N1B4 0.88 Pf1N1B4_970 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) 0.70 Pf1N1B4_973 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.97 3
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_5320 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) 0.71 Pf6N2E2_5317 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.92 4
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_16975 cytochrome C oxidase 0.72 AO356_16960 ubiquinol oxidase subunit II 0.85 4
Pseudomonas sp. RS175 0.82 PFR28_00245 Cytochrome bo(3) ubiquinol oxidase subunit 4 0.72 PFR28_00242 Cytochrome bo(3) ubiquinol oxidase subunit 2 low > 88
Pseudomonas fluorescens GW456-L13 0.80 PfGW456L13_4933 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) 0.73 PfGW456L13_4936 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.95 3
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_15465 cytochrome C oxidase 0.73 AO353_15450 ubiquinol oxidase subunit II 0.85 4
Pseudomonas putida KT2440 0.68 PP_0815 cytochrome bo terminal oxidase subunit IV 0.72 PP_0812 cytochrome bo terminal oxidase subunit II — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.65 Psyr_1144 cytochrome bo3 quinol oxidase subunit 4 0.70 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 — —
Pseudomonas syringae pv. syringae B728a 0.65 Psyr_1144 cytochrome bo3 quinol oxidase subunit 4 0.70 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 — —
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS32585 cytochrome C oxidase 0.55 RR42_RS32600 cytochrome O ubiquinol oxidase subunit II 0.60 3
Dickeya dianthicola 67-19 0.53 HGI48_RS05645 cytochrome o ubiquinol oxidase subunit IV 0.57 HGI48_RS05660 cytochrome o ubiquinol oxidase subunit II — —
Dickeya dadantii 3937 0.53 DDA3937_RS05600 cytochrome o ubiquinol oxidase subunit IV 0.56 DDA3937_RS05615 cytochrome o ubiquinol oxidase subunit II — —
Dickeya dianthicola ME23 0.53 DZA65_RS05970 cytochrome o ubiquinol oxidase subunit IV 0.57 DZA65_RS05985 cytochrome o ubiquinol oxidase subunit II — —
Pectobacterium carotovorum WPP14 0.52 HER17_RS15890 cytochrome o ubiquinol oxidase subunit IV 0.57 HER17_RS15875 cytochrome o ubiquinol oxidase subunit II low > 75
Serratia liquefaciens MT49 0.49 IAI46_04970 cytochrome o ubiquinol oxidase subunit IV 0.53 IAI46_04985 cytochrome o ubiquinol oxidase subunit II 0.60 1
Rahnella sp. WP5 0.49 EX31_RS22205 cytochrome o ubiquinol oxidase subunit IV 0.53 EX31_RS22220 cytochrome o ubiquinol oxidase subunit II 0.96 4
Pantoea sp. MT58 0.49 IAI47_14695 cytochrome o ubiquinol oxidase subunit IV 0.58 IAI47_14680 cytochrome o ubiquinol oxidase subunit II 0.89 3
Acinetobacter radioresistens SK82 0.48 MPMX26_01159 Cytochrome bo(3) ubiquinol oxidase subunit 4 0.43 MPMX26_01162 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.88 1
Shewanella loihica PV-4 0.48 Shew_0369 cytochrome C oxidase subunit IV (RefSeq) 0.53 Shew_0366 ubiquinol oxidase, subunit II (RefSeq) low > 60
Shewanella sp. ANA-3 0.47 Shewana3_4034 cytochrome C oxidase subunit IV (RefSeq) 0.49 Shewana3_4031 ubiquinol oxidase, subunit II (RefSeq) low > 73
Erwinia tracheiphila SCR3 0.47 LU632_RS18390 cytochrome o ubiquinol oxidase subunit IV 0.57 LU632_RS18375 cyoA cytochrome o ubiquinol oxidase subunit II — —
Escherichia fergusonii Becca 0.47 EFB2_03628 Cytochrome bo(3) ubiquinol oxidase subunit 4 0.54 EFB2_03625 Cytochrome bo(3) ubiquinol oxidase subunit 2 low > 86
Escherichia coli ECRC101 0.46 MCAODC_27600 cyoD cytochrome o ubiquinol oxidase subunit III 0.54 MCAODC_27585 cyoA cytochrome o ubiquinol oxidase subunit II — —
Escherichia coli ECRC62 0.46 BNILDI_22725 cyoD cytochrome o ubiquinol oxidase subunit III 0.54 BNILDI_22710 cyoA cytochrome o ubiquinol oxidase subunit II — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_03244 Cytochrome bo(3) ubiquinol oxidase subunit 4 0.54 OHPLBJKB_03241 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.63 2
Escherichia coli ECRC99 0.46 KEDOAH_19590 cyoD cytochrome o ubiquinol oxidase subunit III 0.54 KEDOAH_19605 cyoA cytochrome o ubiquinol oxidase subunit II — —
Escherichia coli BW25113 0.46 b0429 cyoD cytochrome o ubiquinol oxidase subunit IV (NCBI) 0.54 b0432 cyoA cytochrome o ubiquinol oxidase subunit II (NCBI) 0.93 2
Escherichia coli ECOR27 0.46 NOLOHH_01310 cyoD cytochrome o ubiquinol oxidase subunit III 0.54 NOLOHH_01295 cyoA cytochrome o ubiquinol oxidase subunit II low > 57
Escherichia coli BL21 0.46 ECD_00380 cytochrome o ubiquinol oxidase subunit IV 0.54 ECD_00383 cytochrome o ubiquinol oxidase subunit II 0.68 2
Escherichia coli ECRC98 0.46 JDDGAC_12030 cyoD cytochrome o ubiquinol oxidase subunit III 0.54 JDDGAC_12015 cyoA cytochrome o ubiquinol oxidase subunit II — —
Escherichia coli ECRC102 0.46 NIAGMN_06430 cyoD cytochrome o ubiquinol oxidase subunit III 0.54 NIAGMN_06415 cyoA cytochrome o ubiquinol oxidase subunit II — —
Escherichia coli ECRC101 0.46 OKFHMN_08375 cyoD cytochrome o ubiquinol oxidase subunit III 0.54 OKFHMN_08360 cyoA cytochrome o ubiquinol oxidase subunit II — —
Escherichia coli ECOR38 0.46 HEPCGN_06990 cyoD cytochrome o ubiquinol oxidase subunit III 0.54 HEPCGN_06975 cyoA cytochrome o ubiquinol oxidase subunit II low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF4343 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) 0.53 GFF4346 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.76 4
Escherichia coli Nissle 1917 0.46 ECOLIN_RS02580 cytochrome o ubiquinol oxidase subunit IV 0.54 ECOLIN_RS02595 cytochrome o ubiquinol oxidase subunit II 0.77 50
Alteromonas macleodii MIT1002 0.46 MIT1002_03926 Cytochrome o ubiquinol oxidase protein CyoD 0.52 MIT1002_03929 Ubiquinol oxidase subunit 2 precursor low > 70
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS02320 cytochrome o ubiquinol oxidase subunit IV 0.55 ABZR87_RS02335 ubiquinol oxidase subunit II 0.52 6
Enterobacter sp. TBS_079 0.45 MPMX20_01020 Cytochrome bo(3) ubiquinol oxidase subunit 4 0.53 MPMX20_01023 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.57 2
Ralstonia solanacearum GMI1000 0.45 RS_RS14595 cytochrome o ubiquinol oxidase subunit IV 0.54 RS_RS14610 ubiquinol oxidase subunit II — —
Enterobacter asburiae PDN3 0.45 EX28DRAFT_2542 cytochrome o ubiquinol oxidase subunit IV 0.53 EX28DRAFT_2539 cytochrome o ubiquinol oxidase subunit II — —
Caulobacter crescentus NA1000 Δfur 0.45 CCNA_01848 quinol cytochrome oxidase polypeptide IV 0.49 CCNA_01851 quinol cytochrome oxidase polypeptide II low > 67
Caulobacter crescentus NA1000 0.45 CCNA_01848 quinol cytochrome oxidase polypeptide IV 0.49 CCNA_01851 quinol cytochrome oxidase polypeptide II 0.89 4
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS24930 cytochrome C oxidase subunit III 0.53 BPHYT_RS24915 ubiquinol oxidase subunit II 0.20 62
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS36885 cytochrome o ubiquinol oxidase subunit IV 0.54 QEN71_RS13340 ubiquinol oxidase subunit II — —
Klebsiella michiganensis M5al 0.43 BWI76_RS06480 cytochrome o ubiquinol oxidase subunit IV 0.53 BWI76_RS06495 cytochrome ubiquinol oxidase subunit II — —
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS06645 cytochrome o ubiquinol oxidase subunit IV 0.58 RALBFv3_RS06660 ubiquinol oxidase subunit II — —
Ralstonia solanacearum UW163 0.40 UW163_RS06980 cytochrome o ubiquinol oxidase subunit IV 0.58 UW163_RS06965 ubiquinol oxidase subunit II — —
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_03429 cytochrome bo3 quinol oxidase subunit 4 (EC 1.10.3.-) 0.50 H281DRAFT_03426 cytochrome bo3 quinol oxidase subunit 2 (EC 1.10.3.-) 0.33 30
Ralstonia solanacearum PSI07 0.38 RPSI07_RS10580 cytochrome o ubiquinol oxidase subunit IV 0.57 RPSI07_RS10565 ubiquinol oxidase subunit II — —
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS07610 cytochrome o ubiquinol oxidase subunit IV 0.47 ABZR86_RS07625 ubiquinol oxidase subunit II 0.89 2
Paraburkholderia graminis OAS925 0.35 ABIE53_005343 cytochrome o ubiquinol oxidase operon protein cyoD 0.52 ABIE53_005340 cytochrome o ubiquinol oxidase subunit 2 — —
Acidovorax sp. GW101-3H11 0.35 Ac3H11_3144 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) 0.41 Ac3H11_3141 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) — —

Not shown: 10 genomes with orthologs for PS417_23375 only; 1 genomes with orthologs for PS417_23390 only