Conservation of cofitness between GFF2905 and GFF4348 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF2905 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein 1.0 GFF4348 AmpG permease 0.54 6
Escherichia coli ECRC101 0.87 MCAODC_05170 yifB YifB family Mg chelatase-like AAA ATPase 0.90 MCAODC_27580 ampG muropeptide MFS transporter AmpG 0.50 32
Escherichia coli ECRC98 0.87 JDDGAC_18285 yifB YifB family Mg chelatase-like AAA ATPase 0.90 JDDGAC_12010 ampG muropeptide MFS transporter AmpG low > 86
Escherichia coli ECRC102 0.87 NIAGMN_12420 yifB YifB family Mg chelatase-like AAA ATPase 0.90 NIAGMN_06410 ampG muropeptide MFS transporter AmpG — —
Escherichia coli BW25113 0.86 b3765 yifB predicted bifunctional enzyme and transcriptional regulator (RefSeq) 0.90 b0433 ampG muropeptide transporter (NCBI) low > 76
Escherichia coli BL21 0.86 ECD_03644 magnesium chelatase family protein and putative transcriptional regulator 0.89 ECD_00384 muropeptide transporter low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.86 OHPLBJKB_04286 Competence protein ComM 0.90 OHPLBJKB_03240 Protein AmpG low > 73
Escherichia coli ECRC62 0.86 BNILDI_04725 yifB YifB family Mg chelatase-like AAA ATPase 0.90 BNILDI_22705 ampG muropeptide MFS transporter AmpG low > 75
Escherichia coli ECOR27 0.86 NOLOHH_06800 yifB YifB family Mg chelatase-like AAA ATPase 0.90 NOLOHH_01290 ampG muropeptide MFS transporter AmpG low > 75
Escherichia coli ECRC100 0.86 OKFHMN_14665 yifB YifB family Mg chelatase-like AAA ATPase 0.90 OKFHMN_08355 ampG muropeptide MFS transporter AmpG low > 80
Escherichia fergusonii Becca 0.86 EFB2_04869 Competence protein ComM 0.89 EFB2_03624 Anhydromuropeptide permease low > 86
Escherichia coli ECRC99 0.79 KEDOAH_13485 yifB YifB family Mg chelatase-like AAA ATPase 0.90 KEDOAH_19610 ampG muropeptide MFS transporter AmpG — —
Enterobacter asburiae PDN3 0.78 EX28DRAFT_4438 Mg chelatase-related protein 0.86 EX28DRAFT_2538 AmpG-like permease low > 76
Klebsiella michiganensis M5al 0.77 BWI76_RS00950 ATP-dependent protease 0.88 BWI76_RS06500 muropeptide transporter AmpG low > 92
Enterobacter sp. TBS_079 0.77 MPMX20_04503 Competence protein ComM 0.86 MPMX20_01024 Anhydromuropeptide permease low > 85
Escherichia coli ECOR38 0.70 HEPCGN_13375 yifB YifB family Mg chelatase-like AAA ATPase 0.90 HEPCGN_06970 ampG muropeptide MFS transporter AmpG low > 87
Pantoea sp. MT58 0.66 IAI47_01010 YifB family Mg chelatase-like AAA ATPase 0.68 IAI47_14675 muropeptide MFS transporter AmpG low > 76
Serratia liquefaciens MT49 0.66 IAI46_24375 YifB family Mg chelatase-like AAA ATPase 0.77 IAI46_04990 muropeptide MFS transporter AmpG low > 86
Dickeya dadantii 3937 0.66 DDA3937_RS20180 YifB family Mg chelatase-like AAA ATPase 0.69 DDA3937_RS05620 muropeptide MFS transporter AmpG low > 74
Dickeya dianthicola ME23 0.66 DZA65_RS21365 YifB family Mg chelatase-like AAA ATPase 0.67 DZA65_RS05990 muropeptide MFS transporter AmpG low > 75
Pectobacterium carotovorum WPP14 0.66 HER17_RS01050 YifB family Mg chelatase-like AAA ATPase 0.73 HER17_RS15870 muropeptide MFS transporter AmpG low > 75
Dickeya dianthicola 67-19 0.65 HGI48_RS20325 YifB family Mg chelatase-like AAA ATPase 0.68 HGI48_RS05665 muropeptide MFS transporter AmpG low > 71
Erwinia tracheiphila SCR3 0.65 LU632_RS24425 YifB family Mg chelatase-like AAA ATPase 0.62 LU632_RS18370 ampG muropeptide MFS transporter AmpG low > 74
Rahnella sp. WP5 0.62 EX31_RS14980 YifB family Mg chelatase-like AAA ATPase 0.74 EX31_RS22225 muropeptide MFS transporter AmpG low > 89
Vibrio cholerae E7946 ATCC 55056 0.59 CSW01_00160 ATP-dependent protease 0.18 CSW01_11705 MFS transporter low > 62
Shewanella sp. ANA-3 0.53 Shewana3_3820 Mg chelatase, subunit ChlI (RefSeq) 0.24 Shewana3_0783 major facilitator transporter (RefSeq) low > 73
Shewanella oneidensis MR-1 0.52 SO0349 magnesium chelatase family protein (NCBI ptt file) 0.24 SO3814 ampG protein, putative (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.51 Shew_0283 Mg chelatase, subunit ChlI (RefSeq) 0.23 Shew_2892 major facilitator transporter (RefSeq) low > 60
Shewanella amazonensis SB2B 0.50 Sama_3288 magnesium chelatase family protein (RefSeq) 0.23 Sama_2556 AmpG protein, putative (RefSeq) low > 62
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS13495 YifB family Mg chelatase-like AAA ATPase 0.20 ABZR86_RS15655 MFS transporter low > 74
Marinobacter adhaerens HP15 0.48 HP15_277 Mg-chelatase subunits D/I family, ComM subfamily protein 0.20 HP15_2363 major facilitator superfamily MFS_1 — —
Kangiella aquimarina DSM 16071 0.48 B158DRAFT_0343 Mg chelatase-related protein 0.19 B158DRAFT_0920 Major Facilitator Superfamily. low > 40
Lysobacter sp. OAE881 0.47 ABIE51_RS00155 YifB family Mg chelatase-like AAA ATPase 0.21 ABIE51_RS00050 MFS transporter low > 62
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS01740 ATP-dependent protease 0.53 RR42_RS01185 muropeptide transporter low > 128
Alteromonas macleodii MIT1002 0.47 MIT1002_04043 Competence protein ComM 0.21 MIT1002_00655 muropeptide transporter low > 70
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS06675 YifB family Mg chelatase-like AAA ATPase 0.55 ABZR87_RS05635 muropeptide transporter low > 80
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.4916.1 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein 0.18 Xcc-8004.4880.1 AmpG permease low > 74
Ralstonia solanacearum PSI07 0.45 RPSI07_RS22485 ATP-dependent protease 0.55 RPSI07_RS23200 MFS transporter low > 81
Ralstonia solanacearum GMI1000 0.44 RS_RS01665 ATP-dependent protease 0.55 RS_RS00760 MFS transporter low > 80
Ralstonia solanacearum UW163 0.44 UW163_RS02755 ATP-dependent protease 0.55 UW163_RS03435 MFS transporter — —
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS10825 ATP-dependent protease 0.55 RALBFv3_RS10145 MFS transporter low > 76
Acidovorax sp. GW101-3H11 0.44 Ac3H11_3404 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein 0.21 Ac3H11_3358 AmpG permease low > 79
Variovorax sp. OAS795 0.43 ABID97_RS03620 YifB family Mg chelatase-like AAA ATPase 0.20 ABID97_RS03830 AmpG family muropeptide MFS transporter low > 91
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS01390 YifB family Mg chelatase-like AAA ATPase 0.26 QEN71_RS00280 AmpG family muropeptide MFS transporter low > 153
Paraburkholderia graminis OAS925 0.42 ABIE53_000652 magnesium chelatase family protein 0.26 ABIE53_000412 PAT family beta-lactamase induction signal transducer AmpG low > 113
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS02535 magnesium chelatase subunit ChlI 0.26 BPHYT_RS01585 major facilitator superfamily protein low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF1924 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein 0.21 GFF1869 AmpG permease low > 90
Bacteroides stercoris CC31F 0.38 HMPREF1181_RS01265 YifB family Mg chelatase-like AAA ATPase 0.10 HMPREF1181_RS03040 MFS transporter low > 56
Rhodopseudomonas palustris CGA009 0.37 TX73_001650 YifB family Mg chelatase-like AAA ATPase 0.27 TX73_003205 MFS transporter low > 86
Variovorax sp. SCN45 0.36 GFF6347 AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination 0.21 GFF5071 AmpG permease low > 127
Sinorhizobium meliloti 1021 0.33 SMc00420 hypothetical protein 0.11 SMc02889 transporter low > 103
Azospirillum brasilense Sp245 0.32 AZOBR_RS02315 ATPase AAA 0.28 AZOBR_RS09735 MFS transporter permease low > 97
Azospirillum sp. SherDot2 0.31 MPMX19_02482 Competence protein ComM 0.29 MPMX19_04371 Anhydromuropeptide permease 0.46 18

Not shown: 40 genomes with orthologs for GFF2905 only; 4 genomes with orthologs for GFF4348 only