| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Marinobacter adhaerens HP15 | 1.0 | HP15_1369 | | conserved hypothetical protein | 1.0 | HP15_3968 | | two component transcriptional regulator, winged helix family | 0.43 | 11 |
| Rhodanobacter sp. FW510-T8 | 0.28 | OKGIIK_07250 | lapB | lipopolysaccharide assembly protein LapB | 0.37 | OKGIIK_14050 | ompR | DNA-binding response regulator | low | > 52 |
| Rhodanobacter denitrificans MT42 | 0.28 | LRK55_RS17905 | | lipopolysaccharide assembly protein LapB | 0.38 | LRK55_RS07340 | | response regulator | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.28 | LRK54_RS18050 | | lipopolysaccharide assembly protein LapB | 0.38 | LRK54_RS07600 | | response regulator | low | > 59 |
| Dyella japonica UNC79MFTsu3.2 | 0.28 | ABZR86_RS05550 | | lipopolysaccharide assembly protein LapB | 0.39 | ABZR86_RS01270 | | response regulator | low | > 74 |
| Vibrio cholerae E7946 ATCC 55056 | 0.28 | CSW01_09565 | | lipopolysaccharide assembly protein LapB | 0.37 | CSW01_19595 | | DNA-binding response regulator | — | — |
| Rahnella sp. WP5 | 0.25 | EX31_RS09865 | | lipopolysaccharide assembly protein LapB | 0.39 | EX31_RS03275 | | response regulator | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.25 | QEN71_RS04110 | | lipopolysaccharide assembly protein LapB | 0.41 | QEN71_RS02475 | | response regulator | — | — |
| Shewanella sp. ANA-3 | 0.25 | Shewana3_1980 | | tetratricopeptide repeat protein (RefSeq) | 0.39 | Shewana3_1885 | | two component transcriptional regulator (RefSeq) | — | — |
| Klebsiella michiganensis M5al | 0.25 | BWI76_RS11960 | | lipopolysaccharide assembly protein LapB | 0.42 | BWI76_RS24335 | | two-component system response regulator QseB | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.25 | H281DRAFT_03916 | | Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain | 0.42 | H281DRAFT_04180 | | two component transcriptional regulator, winged helix family | — | — |
| Shewanella oneidensis MR-1 | 0.25 | SO2399 | | conserved hypothetical protein (NCBI ptt file) | 0.39 | SO2104 | | DNA-binding response regulator YgiX, putative (NCBI ptt file) | — | — |
| Serratia liquefaciens MT49 | 0.25 | IAI46_13930 | | lipopolysaccharide assembly protein LapB | 0.37 | IAI46_20825 | | response regulator | — | — |
| Paraburkholderia graminis OAS925 | 0.25 | ABIE53_003149 | | lipopolysaccharide biosynthesis regulator YciM | 0.43 | ABIE53_003418 | | two-component system response regulator QseB | — | — |
| Burkholderia phytofirmans PsJN | 0.25 | BPHYT_RS14870 | | hypothetical protein | 0.42 | BPHYT_RS16220 | | transcriptional regulator | — | — |
| Enterobacter sp. TBS_079 | 0.25 | MPMX20_02495 | | Lipopolysaccharide assembly protein B | 0.42 | MPMX20_03863 | | Transcriptional regulatory protein QseB | — | — |
| Escherichia coli ECRC102 | 0.25 | NIAGMN_26725 | lapB | lipopolysaccharide assembly protein LapB | 0.41 | NIAGMN_16645 | | Transcriptional regulatory protein QseB | — | — |
| Escherichia coli ECRC98 | 0.25 | JDDGAC_05100 | lapB | lipopolysaccharide assembly protein LapB | 0.41 | JDDGAC_22515 | | Transcriptional regulatory protein QseB | — | — |
| Escherichia coli ECOR38 | 0.25 | HEPCGN_25645 | lapB | lipopolysaccharide assembly protein LapB | 0.41 | HEPCGN_17740 | | Quorum sensing DNA-binding response regulator in two-component regulatory system with QseC | — | — |
| Escherichia coli BW25113 | 0.25 | b1280 | yciM | hypothetical protein (NCBI) | 0.41 | b3025 | qseB | DNA-binding response regulator in two-component regulatory system with QseC (NCBI) | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.25 | OHPLBJKB_02402 | | Lipopolysaccharide assembly protein B | 0.41 | OHPLBJKB_00677 | | Transcriptional regulatory protein QseB | — | — |
| Escherichia coli ECOR27 | 0.25 | NOLOHH_20220 | lapB | lipopolysaccharide assembly protein LapB | 0.41 | NOLOHH_10660 | | Transcriptional regulatory protein QseB | — | — |
| Enterobacter asburiae PDN3 | 0.25 | EX28DRAFT_0953 | | Predicted N-acetylglucosaminyl transferase | 0.41 | EX28DRAFT_3057 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | — | — |
| Escherichia coli Nissle 1917 | 0.25 | ECOLIN_RS07725 | | lipopolysaccharide assembly protein LapB | 0.41 | ECOLIN_RS17425 | | quorum sensing response regulator transcription factor QseB | — | — |
| Escherichia coli ECRC62 | 0.25 | BNILDI_18370 | lapB | lipopolysaccharide assembly protein LapB | 0.41 | BNILDI_00855 | | Transcriptional regulatory protein QseB | — | — |
| Escherichia fergusonii Becca | 0.25 | EFB2_02645 | | Lipopolysaccharide assembly protein B | 0.41 | EFB2_00788 | | Transcriptional regulatory protein QseB | — | — |
| Escherichia coli BL21 | 0.25 | ECD_01257 | | LPS regulatory protein; putative modulator of LpxC proteolysis | 0.41 | ECD_02897 | | quorum sensing DNA-binding response regulator in two-component regulatory system with QseC | — | — |
| Escherichia coli ECRC101 | 0.25 | MCAODC_15710 | lapB | lipopolysaccharide assembly protein LapB | 0.41 | MCAODC_09395 | | Transcriptional regulatory protein QseB | — | — |
| Escherichia coli ECRC100 | 0.25 | OKFHMN_02555 | lapB | lipopolysaccharide assembly protein LapB | 0.41 | OKFHMN_18880 | | Transcriptional regulatory protein QseB | — | — |
| Escherichia coli ECRC99 | 0.25 | KEDOAH_26210 | lapB | lipopolysaccharide assembly protein LapB | 0.41 | KEDOAH_09265 | | Transcriptional regulatory protein QseB | — | — |
| Erwinia tracheiphila SCR3 | 0.24 | LU632_RS12515 | lapB | lipopolysaccharide assembly protein LapB | 0.37 | LU632_RS21175 | pmrA | two-component system response regulator PmrA | — | — |
| Pectobacterium carotovorum WPP14 | 0.24 | HER17_RS09385 | | lipopolysaccharide assembly protein LapB | 0.37 | HER17_RS21560 | | response regulator | — | — |
| Herbaspirillum seropedicae SmR1 | 0.24 | HSERO_RS18395 | | N-acetylglucosaminyl transferase | 0.40 | HSERO_RS21985 | | transcriptional regulator | — | — |
| Pantoea sp. MT58 | 0.24 | IAI47_09270 | | lipopolysaccharide assembly protein LapB | 0.42 | IAI47_00340 | | response regulator | — | — |
| Dickeya dianthicola 67-19 | 0.23 | HGI48_RS12585 | | lipopolysaccharide assembly protein LapB | 0.40 | HGI48_RS21345 | | response regulator | — | — |
| Dechlorosoma suillum PS | 0.23 | Dsui_1946 | | putative N-acetylglucosaminyl transferase | 0.37 | Dsui_3448 | | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | low | > 51 |
| Ralstonia solanacearum UW163 | 0.23 | UW163_RS16010 | | lipopolysaccharide assembly protein LapB | 0.39 | UW163_RS04360 | | DNA-binding response regulator | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.23 | RALBFv3_RS13800 | | lipopolysaccharide assembly protein LapB | 0.39 | RALBFv3_RS09230 | | DNA-binding response regulator | — | — |
| Dickeya dianthicola ME23 | 0.23 | DZA65_RS13035 | | lipopolysaccharide assembly protein LapB | 0.39 | DZA65_RS22325 | | response regulator | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.23 | GFF2705 | | Heat shock (predicted periplasmic) protein YciM, precursor | 0.41 | GFF3138 | | Two-component system response regulator QseB | — | — |
| Ralstonia sp. UNC404CL21Col | 0.23 | ABZR87_RS09490 | | lipopolysaccharide assembly protein LapB | 0.38 | ABZR87_RS22890 | | response regulator transcription factor | — | — |
| Ralstonia solanacearum GMI1000 | 0.22 | RS_RS04535 | | lipopolysaccharide assembly protein LapB | 0.37 | RS_RS24590 | | DNA-binding response regulator | — | — |
| Ralstonia solanacearum PSI07 | 0.22 | RPSI07_RS19670 | | lipopolysaccharide assembly protein LapB | 0.38 | RPSI07_RS08050 | | DNA-binding response regulator | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.21 | RR42_RS04505 | | N-acetylglucosaminyl transferase | 0.37 | RR42_RS37390 | | XRE family transcriptional regulator | — | — |
| Castellaniella sp019104865 MT123 | 0.19 | ABCV34_RS07075 | | lipopolysaccharide assembly protein LapB | 0.37 | ABCV34_RS11770 | | response regulator | — | — |
| Variovorax sp. SCN45 | 0.19 | GFF6176 | | Lipopolysaccharide assembly protein LapB | 0.40 | GFF1175 | | Two-component system response regulator QseB | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.18 | GFF5349 | | Heat shock (predicted periplasmic) protein YciM, precursor | 0.39 | GFF3523 | | Two-component system response regulator QseB | — | — |
| Acidovorax sp. GW101-3H11 | 0.18 | Ac3H11_2580 | | Heat shock (predicted periplasmic) protein YciM, precursor | 0.35 | Ac3H11_1263 | | Response regulator receiver:Transcriptional regulatory protein, C- terminal | — | — |
| Variovorax sp. OAS795 | 0.17 | ABID97_RS09485 | | lipopolysaccharide assembly protein LapB | 0.39 | ABID97_RS14955 | | response regulator | — | — |