Conservation of cofitness between PS417_01600 and PS417_19995 in Pseudomonas simiae WCS417

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_01600 peptidase M23 1.0 PS417_19995 Long-chain fatty acid transport protein 0.38 15
Pseudomonas fluorescens SBW25 0.99 PFLU_RS01650 murein hydrolase activator EnvC 0.86 PFLU_RS21965 transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS01650 murein hydrolase activator EnvC 0.86 PFLU_RS21965 transporter low > 109
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_12110 peptidase M23 0.73 AO353_02580 Long-chain fatty acid transport protein low > 101
Pseudomonas fluorescens FW300-N2E2 0.88 Pf6N2E2_3834 Lipoprotein NlpD 0.73 Pf6N2E2_5754 Long-chain fatty acid transport protein low > 103
Pseudomonas fluorescens FW300-N1B4 0.88 Pf1N1B4_1618 Lipoprotein NlpD 0.65 Pf1N1B4_3720 Long-chain fatty acid transport protein — —
Pseudomonas sp. RS175 0.88 PFR28_04937 Murein hydrolase activator EnvC 0.74 PFR28_03194 Long-chain fatty acid transport protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_09775 peptidase M23 0.74 AO356_19200 Long-chain fatty acid transport protein low > 104
Pseudomonas fluorescens GW456-L13 0.81 PfGW456L13_354 Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP 0.64 PfGW456L13_4229 Long-chain fatty acid transport protein low > 87
Pseudomonas syringae pv. syringae B728a 0.79 Psyr_4886 Peptidase M23B 0.59 Psyr_3669 Membrane protein involved in aromatic hydrocarbon degradation low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.79 Psyr_4886 Peptidase M23B 0.59 Psyr_3669 Membrane protein involved in aromatic hydrocarbon degradation low > 86
Pseudomonas putida KT2440 0.72 PP_5057 Peptidase, M23/M37 family 0.59 PP_1689 putative Long-chain fatty acid transporter low > 96
Pseudomonas sp. S08-1 0.69 OH686_14650 Murein hydrolase activator EnvC 0.48 OH686_04915 Long-chain fatty acid transport protein low > 80
Pseudomonas stutzeri RCH2 0.67 Psest_0161 Membrane-bound metallopeptidase 0.55 Psest_2997 Long-chain fatty acid transport protein 0.30 7
Marinobacter adhaerens HP15 0.28 HP15_3006 peptidase M23B 0.19 HP15_291 membrane protein involved in aromatic hydrocarbon degradation low > 73
Shewanella loihica PV-4 0.26 Shew_3807 peptidase M23B (RefSeq) 0.20 Shew_3468 membrane protein involved in aromatic hydrocarbon degradation (RefSeq) low > 60
Shewanella sp. ANA-3 0.26 Shewana3_0050 peptidase M23B (RefSeq) 0.23 Shewana3_3757 membrane protein involved in aromatic hydrocarbon degradation (RefSeq) low > 73
Shewanella oneidensis MR-1 0.25 SO0048 peptidase, M23/M37 family (NCBI ptt file) 0.20 SO4232 long-chain fatty acid transport protein (NCBI ptt file) low > 76
Lysobacter sp. OAE881 0.25 ABIE51_RS19260 peptidoglycan DD-metalloendopeptidase family protein 0.19 ABIE51_RS19235 outer membrane protein transport protein low > 62
Shewanella amazonensis SB2B 0.25 Sama_0059 M24/M37 family peptidase (RefSeq) 0.20 Sama_0339 membrane protein involved in aromatic hydrocarbon degradation (RefSeq) low > 62
Dechlorosoma suillum PS 0.24 Dsui_1271 membrane-bound metallopeptidase 0.22 Dsui_0321 long-chain fatty acid transport protein low > 51
Alteromonas macleodii MIT1002 0.23 MIT1002_00489 Septal ring factor 0.21 MIT1002_03890 Outer membrane flp protein low > 70
Enterobacter asburiae PDN3 0.22 EX28DRAFT_3864 Membrane-bound metallopeptidase 0.18 EX28DRAFT_0268 Long-chain fatty acid transport protein low > 76
Enterobacter sp. TBS_079 0.22 MPMX20_00120 Murein hydrolase activator EnvC 0.17 MPMX20_03271 Long-chain fatty acid transport protein low > 85
Escherichia coli ECOR38 0.22 HEPCGN_14570 envC murein hydrolase activator EnvC 0.16 HEPCGN_21740 fadL long-chain fatty acid transporter FadL low > 85
Pectobacterium carotovorum WPP14 0.22 HER17_RS20750 murein hydrolase activator EnvC 0.19 HER17_RS06875 long-chain fatty acid transporter FadL low > 75
Escherichia fergusonii Becca 0.22 EFB2_00197 Murein hydrolase activator EnvC 0.19 EFB2_01515 Long-chain fatty acid transport protein low > 86
Escherichia coli ECRC99 0.21 KEDOAH_12420 envC murein hydrolase activator EnvC 0.16 KEDOAH_05650 fadL long-chain fatty acid transporter FadL — —
Dickeya dadantii 3937 0.21 DDA3937_RS20420 murein hydrolase activator EnvC 0.19 DDA3937_RS14615 long-chain fatty acid transporter FadL low > 74
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_00086 Murein hydrolase activator EnvC 0.16 OHPLBJKB_01362 Long-chain fatty acid transport protein low > 73
Escherichia coli ECRC62 0.21 BNILDI_03905 envC murein hydrolase activator EnvC 0.16 BNILDI_13095 fadL long-chain fatty acid transporter FadL — —
Escherichia coli BW25113 0.21 b3613 yibP putative membrane protein (VIMSS) 0.16 b2344 fadL long-chain fatty acid outer membrane transporter (RefSeq) low > 76
Escherichia coli ECOR27 0.21 NOLOHH_07610 envC murein hydrolase activator EnvC 0.16 NOLOHH_14180 fadL long-chain fatty acid transporter FadL low > 57
Escherichia coli ECRC101 0.21 OKFHMN_15730 envC murein hydrolase activator EnvC 0.16 OKFHMN_22545 fadL long-chain fatty acid transporter FadL — —
Escherichia coli ECRC98 0.21 JDDGAC_19355 envC murein hydrolase activator EnvC 0.16 JDDGAC_26505 fadL long-chain fatty acid transporter FadL — —
Escherichia coli Nissle 1917 0.21 ECOLIN_RS20620 murein hydrolase activator EnvC 0.19 ECOLIN_RS13565 long-chain fatty acid transporter FadL low > 52
Escherichia coli ECRC101 0.21 MCAODC_06240 envC murein hydrolase activator EnvC 0.16 MCAODC_13575 fadL long-chain fatty acid transporter FadL — —
Escherichia coli ECRC102 0.21 NIAGMN_13490 envC murein hydrolase activator EnvC 0.16 NIAGMN_20320 fadL long-chain fatty acid transporter FadL — —
Escherichia coli BL21 0.21 ECD_03471 activator of AmiB,C murein hydrolases, septal ring factor 0.16 ECD_02268 long-chain fatty acid outer membrane transporter — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.21 GFF397 Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP 0.18 GFF1957 Long-chain fatty acid transport protein — —
Klebsiella michiganensis M5al 0.21 BWI76_RS27235 murein hydrolase activator EnvC 0.17 BWI76_RS20470 long-chain fatty acid transporter low > 92
Dickeya dianthicola ME23 0.21 DZA65_RS00835 murein hydrolase activator EnvC 0.20 DZA65_RS15505 long-chain fatty acid transporter FadL low > 75
Castellaniella sp019104865 MT123 0.21 ABCV34_RS14275 peptidoglycan DD-metalloendopeptidase family protein 0.23 ABCV34_RS11395 porin low > 48
Erwinia tracheiphila SCR3 0.21 LU632_RS21895 envC murein hydrolase activator EnvC 0.19 LU632_RS07305 fadL long-chain fatty acid transporter FadL low > 74
Rahnella sp. WP5 0.21 EX31_RS14365 murein hydrolase activator EnvC 0.20 EX31_RS19720 long-chain fatty acid transporter FadL low > 89
Dickeya dianthicola 67-19 0.21 HGI48_RS00780 murein hydrolase activator EnvC 0.20 HGI48_RS14565 long-chain fatty acid transporter FadL low > 71
Pantoea sp. MT58 0.20 IAI47_00720 murein hydrolase activator EnvC 0.20 IAI47_06115 long-chain fatty acid transporter FadL low > 76
Vibrio cholerae E7946 ATCC 55056 0.20 CSW01_01735 peptidase M23 0.21 CSW01_18440 long-chain fatty acid transporter low > 62
Serratia liquefaciens MT49 0.20 IAI46_24715 murein hydrolase activator EnvC 0.19 IAI46_18060 long-chain fatty acid transporter FadL low > 86
Rhodospirillum rubrum S1H 0.11 Rru_A1233 Peptidase M23B (NCBI) 0.22 Rru_A1313 Membrane protein involved in aromatic hydrocarbon degradation (NCBI) — —
Azospirillum sp. SherDot2 0.10 MPMX19_01938 hypothetical protein 0.23 MPMX19_00681 47 kDa outer membrane protein low > 112
Pedobacter sp. GW460-11-11-14-LB5 0.09 CA265_RS19025 peptidase M23 0.15 CA265_RS02950 long-chain fatty acid transporter low > 88
Pontibacter actiniarum KMM 6156, DSM 19842 0.07 CA264_14515 peptidase M23 0.13 CA264_16545 long-chain fatty acid transporter permease low > 74

Not shown: 13 genomes with orthologs for PS417_01600 only; 6 genomes with orthologs for PS417_19995 only