Conservation of cofitness between PS417_08540 and PS417_19755 in Pseudomonas simiae WCS417

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_08540 RNA helicase 1.0 PS417_19755 flagellar motor switch protein FliM 0.51 20
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS08490 DEAD/DEAH box helicase 0.99 PFLU_RS21725 flagellar motor switch protein FliM low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS08490 DEAD/DEAH box helicase 0.99 PFLU_RS21725 flagellar motor switch protein FliM — —
Pseudomonas fluorescens FW300-N1B4 0.98 Pf1N1B4_265 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) 0.97 Pf1N1B4_3615 Flagellar motor switch protein FliM — —
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_03110 RNA helicase 0.97 AO356_03785 flagellar motor switch protein FliM — —
Pseudomonas fluorescens FW300-N2E2 0.97 Pf6N2E2_2450 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) 0.97 Pf6N2E2_2583 Flagellar motor switch protein FliM — —
Pseudomonas fluorescens FW300-N2E3 0.96 AO353_19130 RNA helicase 0.97 AO353_18730 flagellar motor switch protein FliM — —
Pseudomonas sp. RS175 0.95 PFR28_00980 ATP-dependent RNA helicase DeaD 0.97 PFR28_00842 Flagellar motor switch protein FliM low > 88
Pseudomonas fluorescens GW456-L13 0.95 PfGW456L13_2247 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) 0.97 PfGW456L13_4342 Flagellar motor switch protein FliM — —
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_3619 Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminal 0.93 Psyr_3447 Flagellar motor switch protein FliM — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_3619 Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminal 0.93 Psyr_3447 Flagellar motor switch protein FliM — —
Pseudomonas putida KT2440 0.90 PP_1868 ATP-dependent DEAD-box RNA helicase DeaD 0.94 PP_4358 flagellar synthesis, switching and energizing component — —
Pseudomonas stutzeri RCH2 0.84 Psest_1804 Superfamily II DNA and RNA helicases 0.88 Psest_1729 flagellar motor switch protein FliM low > 67
Pseudomonas sp. S08-1 0.82 OH686_22545 DEAD-box ATP-dependent RNA helicase DeaD ( CshA) 0.90 OH686_02785 flagellar motor switch protein FliM 0.55 71
Rhodanobacter sp. FW510-T8 0.46 OKGIIK_09705 ATP-dependent RNA helicase 0.55 OKGIIK_02780 fliM flagellar motor switch protein FliM low > 52
Rhodanobacter denitrificans MT42 0.46 LRK55_RS02405 DEAD/DEAH box helicase 0.57 LRK55_RS13270 flagellar motor switch protein FliM low > 63
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS02650 DEAD/DEAH box helicase 0.57 LRK54_RS13530 flagellar motor switch protein FliM low > 59
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS08990 DEAD/DEAH box helicase 0.57 ABZR86_RS20215 flagellar motor switch protein FliM low > 74
Dechlorosoma suillum PS 0.44 Dsui_1351 DNA/RNA helicase, superfamily II 0.48 Dsui_1749 flagellar motor switch protein FliM low > 51
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.1841.1 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) 0.53 Xcc-8004.2816.1 Flagellar motor switch protein FliM low > 74
Alteromonas macleodii MIT1002 0.43 MIT1002_00666 Cold-shock DEAD box protein A 0.64 MIT1002_01092 Flagellar motor switch protein FliM low > 70
Shewanella loihica PV-4 0.42 Shew_0531 DEAD/DEAH box helicase domain-containing protein (RefSeq) 0.66 Shew_1373 fliM flagellar motor switch protein FliM (RefSeq) low > 60
Shewanella amazonensis SB2B 0.42 Sama_0512 ATP-dependent RNA helicase DeaD (RefSeq) 0.65 Sama_2290 fliM flagellar motor switch protein FliM (RefSeq) low > 62
Rahnella sp. WP5 0.41 EX31_RS08510 DEAD/DEAH family ATP-dependent RNA helicase 0.38 EX31_RS09575 flagellar motor switch protein FliM low > 89
Pectobacterium carotovorum WPP14 0.41 HER17_RS18175 DEAD/DEAH family ATP-dependent RNA helicase 0.40 HER17_RS08245 flagellar motor switch protein FliM low > 75
Pantoea sp. MT58 0.41 IAI47_16990 DEAD/DEAH family ATP-dependent RNA helicase 0.39 IAI47_07995 flagellar motor switch protein FliM low > 76
Shewanella oneidensis MR-1 0.41 SO4034 deaD ATP-dependent RNA helicase DeaD (NCBI ptt file) 0.65 SO3221 fliM flagellar motor switch protein FliM (NCBI ptt file) low > 76
Dickeya dianthicola 67-19 0.41 HGI48_RS03275 DEAD/DEAH family ATP-dependent RNA helicase 0.39 HGI48_RS13445 flagellar motor switch protein FliM 0.48 52
Dickeya dianthicola ME23 0.41 DZA65_RS03270 DEAD/DEAH family ATP-dependent RNA helicase 0.39 DZA65_RS13930 flagellar motor switch protein FliM — —
Erwinia tracheiphila SCR3 0.41 LU632_RS21030 DEAD/DEAH family ATP-dependent RNA helicase 0.38 LU632_RS10540 fliM flagellar motor switch protein FliM — —
Enterobacter sp. TBS_079 0.41 MPMX20_04066 ATP-dependent RNA helicase DeaD 0.38 MPMX20_02942 Flagellar motor switch protein FliM low > 85
Serratia liquefaciens MT49 0.41 IAI46_01970 DEAD/DEAH family ATP-dependent RNA helicase 0.39 IAI46_15875 flagellar motor switch protein FliM low > 86
Enterobacter asburiae PDN3 0.41 EX28DRAFT_3211 Superfamily II DNA and RNA helicases 0.38 EX28DRAFT_0609 flagellar motor switch protein FliM — —
Dickeya dadantii 3937 0.40 DDA3937_RS03100 DEAD/DEAH family ATP-dependent RNA helicase 0.40 DDA3937_RS13400 flagellar motor switch protein FliM low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF1504 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) 0.38 GFF4011 Flagellar motor switch protein FliM low > 78
Shewanella sp. ANA-3 0.40 Shewana3_3595 DEAD/DEAH box helicase domain-containing protein (RefSeq) 0.65 Shewana3_1349 fliM flagellar motor switch protein FliM (RefSeq) low > 73
Escherichia fergusonii Becca 0.39 EFB2_00661 ATP-dependent RNA helicase DeaD 0.38 EFB2_02001 Flagellar motor switch protein FliM low > 86
Escherichia coli Nissle 1917 0.39 ECOLIN_RS18165 ATP-dependent RNA helicase DeaD 0.38 ECOLIN_RS11095 flagellar motor switch protein FliM 0.77 17
Escherichia coli BW25113 0.39 b3162 deaD inducible ATP-independent RNA helicase (VIMSS) 0.38 b1945 fliM flagellar motor switch protein M (NCBI) low > 76
Escherichia coli ECOR27 0.39 NOLOHH_09955 deaD ATP-dependent RNA helicase DeaD 0.38 NOLOHH_16310 fliM flagellar motor switch protein FliM — —
Escherichia coli ECRC62 0.39 BNILDI_01580 deaD ATP-dependent RNA helicase DeaD 0.38 BNILDI_15100 fliM flagellar motor switch protein FliM — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_00538 ATP-dependent RNA helicase DeaD 0.38 OHPLBJKB_01784 Flagellar motor switch protein FliM low > 73
Escherichia coli ECRC102 0.39 NIAGMN_15915 deaD ATP-dependent RNA helicase DeaD 0.38 NIAGMN_02375 fliM flagellar motor switch protein FliM — —
Escherichia coli ECRC101 0.39 OKFHMN_18155 deaD ATP-dependent RNA helicase DeaD 0.38 OKFHMN_25680 fliM flagellar motor switch protein FliM — —
Escherichia coli ECRC98 0.39 JDDGAC_21780 deaD ATP-dependent RNA helicase DeaD 0.38 JDDGAC_00265 fliM flagellar motor switch protein FliM — —
Escherichia coli ECRC99 0.39 KEDOAH_09995 deaD ATP-dependent RNA helicase DeaD 0.38 KEDOAH_02415 fliM flagellar motor switch protein FliM — —
Escherichia coli ECRC101 0.39 MCAODC_08675 deaD ATP-dependent RNA helicase DeaD 0.38 MCAODC_19715 fliM flagellar motor switch protein FliM — —
Escherichia coli ECOR38 0.39 HEPCGN_17030 deaD ATP-dependent RNA helicase DeaD 0.38 HEPCGN_04040 fliM flagellar motor switch protein FliM low > 85
Vibrio cholerae E7946 ATCC 55056 0.37 CSW01_18185 DEAD/DEAH box family ATP-dependent RNA helicase 0.61 CSW01_10610 flagellar motor switch protein FliM low > 62
Desulfovibrio vulgaris Hildenborough JW710 0.33 DVU3310 deaD ATP-dependent RNA helicase, DEAD/DEAH family (TIGR) 0.38 DVU0910 fliM flagellar motor switch protein FliM (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.32 DvMF_2125 DEAD/DEAH box helicase domain protein (RefSeq) 0.37 DvMF_1396 flagellar motor switch protein FliM (RefSeq) — —

Not shown: 17 genomes with orthologs for PS417_08540 only; 25 genomes with orthologs for PS417_19755 only