Conservation of cofitness between PS417_08540 and PS417_19725 in Pseudomonas simiae WCS417

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_08540 RNA helicase 1.0 PS417_19725 flagellar biosynthesis protein FlhB 0.53 7
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS08490 DEAD/DEAH box helicase 0.95 PFLU_RS21695 flagellar biosynthesis protein FlhB low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS08490 DEAD/DEAH box helicase 0.95 PFLU_RS21695 flagellar biosynthesis protein FlhB
Pseudomonas fluorescens FW300-N1B4 0.98 Pf1N1B4_265 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) 0.88 Pf1N1B4_3621 Flagellar biosynthesis protein FlhB
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_03110 RNA helicase 0.81 AO356_03755 flagellar biosynthetic protein FlhB
Pseudomonas fluorescens FW300-N2E2 0.97 Pf6N2E2_2450 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) 0.82 Pf6N2E2_2577 Flagellar biosynthesis protein FlhB
Pseudomonas fluorescens FW300-N2E3 0.96 AO353_19130 RNA helicase 0.81 AO353_18760 flagellar biosynthetic protein FlhB
Pseudomonas sp. RS175 0.95 PFR28_00980 ATP-dependent RNA helicase DeaD 0.80 PFR28_00848 Flagellar biosynthetic protein FlhB low > 88
Pseudomonas fluorescens GW456-L13 0.95 PfGW456L13_2247 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) 0.86 PfGW456L13_4336 Flagellar biosynthesis protein FlhB
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_3619 Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminal 0.73 Psyr_3441 Flagellar biosynthetic protein FlhB
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_3619 Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminal 0.73 Psyr_3441 Flagellar biosynthetic protein FlhB
Pseudomonas putida KT2440 0.90 PP_1868 ATP-dependent DEAD-box RNA helicase DeaD 0.71 PP_4352 flagellin export apparatus, substrate specificity protein
Pseudomonas stutzeri RCH2 0.84 Psest_1804 Superfamily II DNA and RNA helicases 0.70 Psest_1735 flagellar biosynthetic protein FlhB low > 67
Pseudomonas sp. S08-1 0.82 OH686_22545 DEAD-box ATP-dependent RNA helicase DeaD ( CshA) 0.73 OH686_02755 flagellar biosynthetic protein FlhB low > 80
Rhodanobacter sp. FW510-T8 0.46 OKGIIK_09705 ATP-dependent RNA helicase 0.33 OKGIIK_02810 flhB flagellar biosynthesis protein FlhB low > 52
Rhodanobacter denitrificans MT42 0.46 LRK55_RS02405 DEAD/DEAH box helicase 0.35 LRK55_RS13300 flagellar biosynthesis protein FlhB low > 63
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS02650 DEAD/DEAH box helicase 0.35 LRK54_RS13560 flagellar biosynthesis protein FlhB low > 59
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS08990 DEAD/DEAH box helicase 0.35 ABZR86_RS20245 flagellar biosynthesis protein FlhB low > 74
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.1841.1 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) 0.35 Xcc-8004.2827.1 Flagellar biosynthesis protein FlhB low > 74
Dechlorosoma suillum PS 0.44 Dsui_1351 DNA/RNA helicase, superfamily II 0.38 Dsui_1722 flagellar biosynthetic protein FlhB low > 51
Alteromonas macleodii MIT1002 0.43 MIT1002_00666 Cold-shock DEAD box protein A 0.43 MIT1002_01098 Flagellar biosynthetic protein FlhB low > 70
Shewanella loihica PV-4 0.42 Shew_0531 DEAD/DEAH box helicase domain-containing protein (RefSeq) 0.46 Shew_1379 flhB flagellar biosynthesis protein FlhB (RefSeq) low > 60
Shewanella amazonensis SB2B 0.42 Sama_0512 ATP-dependent RNA helicase DeaD (RefSeq) 0.43 Sama_2284 flhB flagellar biosynthesis protein FlhB (RefSeq) low > 62
Rahnella sp. WP5 0.41 EX31_RS08510 DEAD/DEAH family ATP-dependent RNA helicase 0.29 EX31_RS11345 flagellar type III secretion system protein FlhB low > 89
Pectobacterium carotovorum WPP14 0.41 HER17_RS18175 DEAD/DEAH family ATP-dependent RNA helicase 0.36 HER17_RS08135 flagellar type III secretion system protein FlhB low > 75
Pantoea sp. MT58 0.41 IAI47_16990 DEAD/DEAH family ATP-dependent RNA helicase 0.33 IAI47_08345 flagellar type III secretion system protein FlhB low > 76
Shewanella oneidensis MR-1 0.41 SO4034 deaD ATP-dependent RNA helicase DeaD (NCBI ptt file) 0.44 SO3215 flhB flagellar biosynthetic protein FlhB (NCBI ptt file) 0.37 65
Dickeya dianthicola 67-19 0.41 HGI48_RS03275 DEAD/DEAH family ATP-dependent RNA helicase 0.40 HGI48_RS13555 flagellar type III secretion system protein FlhB low > 71
Dickeya dianthicola ME23 0.41 DZA65_RS03270 DEAD/DEAH family ATP-dependent RNA helicase 0.40 DZA65_RS14040 flagellar type III secretion system protein FlhB
Erwinia tracheiphila SCR3 0.41 LU632_RS21030 DEAD/DEAH family ATP-dependent RNA helicase 0.30 LU632_RS13510 flhB flagellar type III secretion system protein FlhB
Enterobacter sp. TBS_079 0.41 MPMX20_04066 ATP-dependent RNA helicase DeaD 0.37 MPMX20_02784 Flagellar biosynthetic protein FlhB low > 85
Serratia liquefaciens MT49 0.41 IAI46_01970 DEAD/DEAH family ATP-dependent RNA helicase 0.35 IAI46_16000 flagellar type III secretion system protein FlhB low > 86
Enterobacter asburiae PDN3 0.41 EX28DRAFT_3211 Superfamily II DNA and RNA helicases 0.37 EX28DRAFT_0680 flagellar biosynthetic protein FlhB
Dickeya dadantii 3937 0.40 DDA3937_RS03100 DEAD/DEAH family ATP-dependent RNA helicase 0.40 DDA3937_RS13510 flagellar type III secretion system protein FlhB low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF1504 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) 0.37 GFF1661 Flagellar biosynthesis protein FlhB low > 78
Shewanella sp. ANA-3 0.40 Shewana3_3595 DEAD/DEAH box helicase domain-containing protein (RefSeq) 0.44 Shewana3_1355 flhB flagellar biosynthesis protein FlhB (RefSeq) low > 73
Escherichia coli BL21 0.39 ECD_03029 ATP-dependent RNA helicase 0.34 ECD_01851 flagellin export apparatus, substrate specificity protein low > 60
Escherichia coli ECOR27 0.39 NOLOHH_09955 deaD ATP-dependent RNA helicase DeaD 0.34 NOLOHH_16605 flhB flagellar biosynthesis protein FlhB
Escherichia coli BW25113 0.39 b3162 deaD inducible ATP-independent RNA helicase (VIMSS) 0.34 b1880 flhB flagellar biosynthesis protein B (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_00538 ATP-dependent RNA helicase DeaD 0.34 OHPLBJKB_01848 Flagellar biosynthetic protein FlhB low > 73
Escherichia fergusonii Becca 0.39 EFB2_00661 ATP-dependent RNA helicase DeaD 0.34 EFB2_02063 Flagellar biosynthetic protein FlhB low > 86
Escherichia coli ECRC62 0.39 BNILDI_01580 deaD ATP-dependent RNA helicase DeaD 0.34 BNILDI_15395 flhB flagellar biosynthesis protein FlhB
Escherichia coli Nissle 1917 0.39 ECOLIN_RS18165 ATP-dependent RNA helicase DeaD 0.34 ECOLIN_RS10740 flagellar biosynthesis protein FlhB low > 52
Escherichia coli ECRC101 0.39 OKFHMN_18155 deaD ATP-dependent RNA helicase DeaD 0.34 OKFHMN_26165 flhB flagellar biosynthesis protein FlhB
Escherichia coli ECRC99 0.39 KEDOAH_09995 deaD ATP-dependent RNA helicase DeaD 0.34 KEDOAH_01940 flhB flagellar biosynthesis protein FlhB
Escherichia coli ECRC102 0.39 NIAGMN_15915 deaD ATP-dependent RNA helicase DeaD 0.34 NIAGMN_01895 flhB flagellar biosynthesis protein FlhB
Escherichia coli ECRC101 0.39 MCAODC_08675 deaD ATP-dependent RNA helicase DeaD 0.34 MCAODC_19240 flhB flagellar biosynthesis protein FlhB
Escherichia coli ECRC98 0.39 JDDGAC_21780 deaD ATP-dependent RNA helicase DeaD 0.34 JDDGAC_00740 flhB flagellar biosynthesis protein FlhB
Escherichia coli ECOR38 0.39 HEPCGN_17030 deaD ATP-dependent RNA helicase DeaD 0.34 HEPCGN_04585 flhB flagellar biosynthesis protein FlhB low > 85
Vibrio cholerae E7946 ATCC 55056 0.37 CSW01_18185 DEAD/DEAH box family ATP-dependent RNA helicase 0.43 CSW01_10580 flagellar biosynthesis protein FlhB low > 62
Desulfovibrio vulgaris Hildenborough JW710 0.33 DVU3310 deaD ATP-dependent RNA helicase, DEAD/DEAH family (TIGR) 0.25 DVU3233 flhB flagellar biosynthetic protein FlhB (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.32 DvMF_2125 DEAD/DEAH box helicase domain protein (RefSeq) 0.24 DvMF_2412 type III secretion protein, YscU/HrpY family (RefSeq)

Not shown: 16 genomes with orthologs for PS417_08540 only; 32 genomes with orthologs for PS417_19725 only