| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas simiae WCS417 | 1.0 | PS417_08090 | | 3-oxoacyl-ACP reductase | 1.0 | PS417_19695 | | flagellar biosynthesis sigma factor | 0.28 | 9 |
| Pseudomonas fluorescens SBW25 | 1.00 | PFLU_RS08060 | | YciK family oxidoreductase | 0.99 | PFLU_RS21660 | | RNA polymerase sigma factor FliA | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 1.00 | PFLU_RS08060 | | YciK family oxidoreductase | 0.99 | PFLU_RS21660 | | RNA polymerase sigma factor FliA | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.87 | Pf1N1B4_358 | | Oxidoreductase, short chain dehydrogenase/reductase family | 0.97 | Pf1N1B4_3626 | | RNA polymerase sigma factor for flagellar operon | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.87 | PfGW456L13_2169 | | Oxidoreductase, short chain dehydrogenase/reductase family | 0.97 | PfGW456L13_4331 | | RNA polymerase sigma factor for flagellar operon | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.87 | AO356_03500 | | 3-oxoacyl-ACP reductase | 0.96 | AO356_03730 | | flagellar biosynthesis sigma factor | 0.34 | 104 |
| Pseudomonas fluorescens FW300-N2E3 | 0.87 | AO353_02105 | | 3-oxoacyl-ACP reductase | 0.97 | AO353_18785 | | flagellar biosynthesis sigma factor | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.86 | Pf6N2E2_2527 | | Oxidoreductase, short chain dehydrogenase/reductase family | 0.96 | Pf6N2E2_2573 | | RNA polymerase sigma factor for flagellar operon | low | > 103 |
| Pseudomonas sp. RS175 | 0.85 | PFR28_00899 | | putative oxidoreductase YciK | 0.95 | PFR28_00852 | | RNA polymerase sigma factor FliA | — | — |
| Pseudomonas putida KT2440 | 0.82 | PP_1763 | | putative oxidoreductase | 0.91 | PP_4341 | | RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons | 0.26 | 44 |
| Pseudomonas stutzeri RCH2 | 0.82 | Psest_2000 | | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | 0.82 | Psest_1740 | | RNA polymerase sigma factor, FliA/WhiG family | low | > 67 |
| Pseudomonas sp. S08-1 | 0.81 | OH686_20835 | | Oxidoreductase, short-chain dehydrogenase/reductase family | 0.84 | OH686_02730 | | RNA polymerase sigma factor for flagellar operon | low | > 80 |
| Pseudomonas syringae pv. syringae B728a | 0.71 | Psyr_3652 | | Short-chain dehydrogenase/reductase SDR | 0.95 | Psyr_3437 | | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.71 | Psyr_3652 | | Short-chain dehydrogenase/reductase SDR | 0.95 | Psyr_3437 | | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG | low | > 86 |
| Marinobacter adhaerens HP15 | 0.59 | HP15_1225 | | oxidoreductase, short chain dehydrogenase/reductase family | 0.58 | HP15_2302 | | flagellar biosynthesis sigma factor FliA | low | > 73 |
| Shewanella loihica PV-4 | 0.59 | Shew_2409 | | short chain dehydrogenase (RefSeq) | 0.52 | Shew_1383 | fliA | flagellar biosynthesis sigma factor (RefSeq) | low | > 60 |
| Alteromonas macleodii MIT1002 | 0.57 | MIT1002_01965 | | putative oxidoreductase YciK | 0.56 | MIT1002_01103 | | Sigma-F factor | low | > 70 |
| Vibrio cholerae E7946 ATCC 55056 | 0.55 | CSW01_05390 | | YciK family oxidoreductase | 0.51 | CSW01_10335 | | RNA polymerase sigma factor FliA | low | > 62 |
| Shewanella oneidensis MR-1 | 0.55 | SO2935 | | oxidoreductase, short-chain dehydrogenase/reductase family (NCBI ptt file) | 0.52 | SO3210 | fliA | RNA polymerase sigma-27 factor (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.53 | Shewana3_1528 | | short chain dehydrogenase (RefSeq) | 0.52 | Shewana3_1359 | fliA | flagellar biosynthesis sigma factor (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.53 | Sama_2121 | | short chain dehydrogenase (RefSeq) | 0.54 | Sama_2280 | fliA | flagellar biosynthesis sigma factor (RefSeq) | low | > 62 |
| Rahnella sp. WP5 | 0.49 | EX31_RS09910 | | YciK family oxidoreductase | 0.42 | EX31_RS09450 | | RNA polymerase sigma factor FliA | low | > 89 |
| Dickeya dadantii 3937 | 0.47 | DDA3937_RS10510 | | YciK family oxidoreductase | 0.43 | DDA3937_RS13300 | | RNA polymerase sigma factor FliA | low | > 74 |
| Dickeya dianthicola 67-19 | 0.47 | HGI48_RS10510 | | YciK family oxidoreductase | 0.43 | HGI48_RS13350 | | RNA polymerase sigma factor FliA | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.47 | HER17_RS10890 | | YciK family oxidoreductase | 0.41 | HER17_RS08355 | | RNA polymerase sigma factor FliA | low | > 75 |
| Dickeya dianthicola ME23 | 0.47 | DZA65_RS10990 | | YciK family oxidoreductase | 0.43 | DZA65_RS13835 | | RNA polymerase sigma factor FliA | low | > 75 |
| Escherichia coli Nissle 1917 | 0.46 | ECOLIN_RS07645 | | YciK family oxidoreductase | 0.42 | ECOLIN_RS10975 | | RNA polymerase sigma factor FliA | — | — |
| Escherichia coli BW25113 | 0.46 | b1271 | yciK | short chain dehydrogenase (NCBI) | 0.42 | b1922 | fliA | flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons (VIMSS) | low | > 76 |
| Escherichia coli ECRC62 | 0.46 | BNILDI_18435 | yciK | YciK family oxidoreductase | 0.42 | BNILDI_15190 | fliA | RNA polymerase sigma factor FliA | — | — |
| Escherichia fergusonii Becca | 0.46 | EFB2_02656 | | putative oxidoreductase YciK | 0.42 | EFB2_02023 | | RNA polymerase sigma factor FliA | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.46 | GFF2717 | | YciK-like oxidoreductase | 0.41 | GFF1690 | | RNA polymerase sigma factor for flagellar operon | low | > 78 |
| Escherichia coli ECRC102 | 0.45 | NIAGMN_26790 | yciK | YciK family oxidoreductase | 0.42 | NIAGMN_02270 | fliA | RNA polymerase sigma factor FliA | — | — |
| Escherichia coli ECRC101 | 0.45 | MCAODC_15645 | yciK | YciK family oxidoreductase | 0.42 | MCAODC_19610 | fliA | RNA polymerase sigma factor FliA | — | — |
| Enterobacter sp. TBS_079 | 0.45 | MPMX20_02505 | | putative oxidoreductase YciK | 0.41 | MPMX20_02847 | | RNA polymerase sigma factor FliA | low | > 85 |
| Escherichia coli ECOR27 | 0.45 | NOLOHH_20285 | yciK | YciK family oxidoreductase | 0.42 | NOLOHH_16400 | fliA | RNA polymerase sigma factor FliA | — | — |
| Escherichia coli ECRC99 | 0.45 | KEDOAH_26145 | yciK | YciK family oxidoreductase | 0.42 | KEDOAH_02310 | fliA | RNA polymerase sigma factor FliA | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.45 | OHPLBJKB_02413 | | putative oxidoreductase YciK | 0.42 | OHPLBJKB_01807 | | RNA polymerase sigma factor FliA | low | > 73 |
| Escherichia coli ECRC98 | 0.45 | JDDGAC_05165 | yciK | YciK family oxidoreductase | 0.42 | JDDGAC_00370 | fliA | RNA polymerase sigma factor FliA | — | — |
| Escherichia coli ECRC101 | 0.45 | OKFHMN_02620 | yciK | YciK family oxidoreductase | 0.42 | OKFHMN_25780 | fliA | RNA polymerase sigma factor FliA | — | — |
| Erwinia tracheiphila SCR3 | 0.45 | LU632_RS12725 | | YciK family oxidoreductase | 0.43 | LU632_RS13785 | | RNA polymerase sigma factor FliA | low | > 74 |
| Escherichia coli ECOR38 | 0.45 | HEPCGN_25580 | yciK | YciK family oxidoreductase | 0.42 | HEPCGN_04135 | fliA | RNA polymerase sigma factor FliA | low | > 85 |
| Enterobacter asburiae PDN3 | 0.45 | EX28DRAFT_0942 | | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | 0.41 | EX28DRAFT_0625 | | RNA polymerase sigma factor, FliA/WhiG family | low | > 76 |
| Serratia liquefaciens MT49 | 0.44 | IAI46_13985 | | YciK family oxidoreductase | 0.42 | IAI46_15785 | | RNA polymerase sigma factor FliA | low | > 86 |
| Pantoea sp. MT58 | 0.44 | IAI47_09220 | | YciK family oxidoreductase | 0.42 | IAI47_08160 | | RNA polymerase sigma factor FliA | low | > 76 |
| Rhodanobacter denitrificans FW104-10B01 | 0.36 | LRK54_RS13830 | | SDR family NAD(P)-dependent oxidoreductase | 0.52 | LRK54_RS13580 | | RNA polymerase sigma factor FliA | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.36 | LRK55_RS13545 | | SDR family NAD(P)-dependent oxidoreductase | 0.52 | LRK55_RS13320 | | RNA polymerase sigma factor FliA | low | > 63 |
| Rhodanobacter sp. FW510-T8 | 0.35 | OKGIIK_03065 | yqjQ | Short-chain dehydrogenase | 0.52 | OKGIIK_02830 | fliA | RNA polymerase sigma factor FliA | low | > 52 |
| Dyella japonica UNC79MFTsu3.2 | 0.30 | ABZR86_RS09815 | | SDR family NAD(P)-dependent oxidoreductase | 0.49 | ABZR86_RS20265 | | RNA polymerase sigma factor FliA | low | > 74 |
| Lysobacter sp. OAE881 | 0.29 | ABIE51_RS15375 | | SDR family NAD(P)-dependent oxidoreductase | 0.50 | ABIE51_RS16865 | | RNA polymerase sigma factor FliA | low | > 62 |
| Sphingomonas koreensis DSMZ 15582 | 0.26 | Ga0059261_3625 | | Short-chain dehydrogenases of various substrate specificities | 0.25 | Ga0059261_2081 | | RNA polymerase sigma factor, FliA/WhiG family | low | > 68 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.25 | Xcc-8004.2015.1 | | Short chain dehydrogenase | 0.44 | Xcc-8004.2832.1 | | RNA polymerase sigma factor for flagellar operon | low | > 74 |
Not shown: 14 genomes with orthologs for PS417_08090 only; 18 genomes with orthologs for PS417_19695 only