Conservation of cofitness between PS417_23250 and PS417_16990 in Pseudomonas simiae WCS417

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_23250 S-adenosylmethionine tRNA ribosyltransferase 1.0 PS417_16990 acyl-CoA dehydrogenase 0.39 14
Pseudomonas fluorescens SBW25 0.99 PFLU_RS24905 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.99 PFLU_RS18940 acyl-CoA dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS24905 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.99 PFLU_RS18940 acyl-CoA dehydrogenase low > 109
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_3005 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) 0.97 Pf1N1B4_3993 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) low > 87
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_15785 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.97 AO353_20380 acyl-CoA dehydrogenase low > 101
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_4883 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) 0.96 PfGW456L13_2597 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) low > 87
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_06695 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.98 AO356_01555 acyl-CoA dehydrogenase low > 104
Pseudomonas sp. RS175 0.91 PFR28_00276 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.97 PFR28_01265 (R)-benzylsuccinyl-CoA dehydrogenase low > 88
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_3199 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) 0.97 Pf6N2E2_2186 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) low > 103
Pseudomonas syringae pv. syringae B728a 0.89 Psyr_1227 Queuosine biosynthesis protein 0.92 Psyr_2474 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.89 Psyr_1227 Queuosine biosynthesis protein 0.92 Psyr_2474 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region low > 86
Pseudomonas putida KT2440 0.89 PP_0832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.92 PP_2437 putative Acyl-CoA dehydrogenase low > 96
Pseudomonas sp. S08-1 0.85 OH686_17425 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.90 OH686_00885 Acyl-CoA dehydrogenase low > 80
Pseudomonas stutzeri RCH2 0.85 Psest_1241 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.87 Psest_2128 Acyl-CoA dehydrogenases low > 67
Shewanella loihica PV-4 0.73 Shew_2338 S-adenosylmethionine--tRNA-ribosyltransferase-isomerase (RefSeq) 0.64 Shew_2860 acyl-CoA dehydrogenase domain-containing protein (RefSeq) — —
Marinobacter adhaerens HP15 0.65 HP15_1478 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.65 HP15_3923 acyl-CoA dehydrogenase family protein low > 73
Alteromonas macleodii MIT1002 0.64 MIT1002_02814 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.59 MIT1002_02317 (R)-benzylsuccinyl-CoA dehydrogenase low > 70
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS01275 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.66 ABZR87_RS14705 acyl-CoA dehydrogenase family protein low > 80
Ralstonia solanacearum GMI1000 0.55 RS_RS13570 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.66 RS_RS10150 acyl-CoA dehydrogenase low > 80
Ralstonia solanacearum PSI07 0.54 RPSI07_RS11620 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.66 RPSI07_RS14530 acyl-CoA dehydrogenase low > 81
Ralstonia solanacearum UW163 0.54 UW163_RS07945 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.66 UW163_RS10945 acyl-CoA dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS05680 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.66 RALBFv3_RS02780 acyl-CoA dehydrogenase low > 76
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS17395 S-adenosylmethionine tRNA ribosyltransferase 0.66 RR42_RS05715 acyl-CoA dehydrogenase low > 128
Variovorax sp. OAS795 0.52 ABID97_RS01590 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.68 ABID97_RS17025 acyl-CoA dehydrogenase family protein low > 91
Acinetobacter radioresistens SK82 0.52 MPMX26_00441 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.57 MPMX26_01461 (R)-benzylsuccinyl-CoA dehydrogenase low > 36
Variovorax sp. SCN45 0.50 GFF5535 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 2.4.99.17) 0.67 GFF365 Acyl-CoA dehydrogenase low > 127
Acidovorax sp. GW101-3H11 0.49 Ac3H11_778 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) 0.66 Ac3H11_1051 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) — —
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS03405 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.66 BPHYT_RS06740 acyl-CoA dehydrogenase low > 109
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS26635 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.66 QEN71_RS24040 acyl-CoA dehydrogenase family protein low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF2801 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) 0.67 GFF4493 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) low > 90
Paraburkholderia graminis OAS925 0.49 ABIE53_000832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.67 ABIE53_001614 acyl-CoA dehydrogenase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_04671 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.67 H281DRAFT_04591 acyl-CoA dehydrogenase low > 103
Azospirillum sp. SherDot2 0.44 MPMX19_01696 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.30 MPMX19_02787 (R)-benzylsuccinyl-CoA dehydrogenase low > 112
Azospirillum brasilense Sp245 0.43 AZOBR_RS06300 S-adenosylmethionine tRNA ribosyltransferase 0.32 AZOBR_RS09415 acyl-CoA dehydrogenase low > 97
Brevundimonas sp. GW460-12-10-14-LB2 0.43 A4249_RS08775 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.57 A4249_RS06520 acyl-CoA dehydrogenase family protein low > 48
Dinoroseobacter shibae DFL-12 0.40 Dshi_1180 Queuosine biosynthesis protein (RefSeq) 0.31 Dshi_1004 acyl-CoA dehydrogenase domain protein (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.39 PGA1_c17420 S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA 0.57 PGA1_c05590 acyl-CoA dehydrogenase-like protein low > 62
Bosea sp. OAE506 0.39 ABIE41_RS17830 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.52 ABIE41_RS20115 acyl-CoA dehydrogenase family protein low > 77
Caulobacter crescentus NA1000 Δfur 0.38 CCNA_01658 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.59 CCNA_00726 acyl-CoA dehydrogenase low > 67
Caulobacter crescentus NA1000 0.38 CCNA_01658 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.59 CCNA_00726 acyl-CoA dehydrogenase low > 66
Sphingomonas koreensis DSMZ 15582 0.38 Ga0059261_1011 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.58 Ga0059261_0847 Acyl-CoA dehydrogenases low > 68
Rhodopseudomonas palustris CGA009 0.36 TX73_013480 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.61 TX73_017005 acyl-CoA dehydrogenase family protein low > 86

Not shown: 58 genomes with orthologs for PS417_23250 only; 1 genomes with orthologs for PS417_16990 only