Conservation of cofitness between Psest_3715 and Psest_3286 in Pseudomonas stutzeri RCH2

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3715 type IV pilus secretin (or competence protein) PilQ 1.0 Psest_3286 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 0.76 15
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_0407 type II and III secretion system protein:NolW-like protein:NolW-like protein 0.73 Psyr_0796 type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_0407 type II and III secretion system protein:NolW-like protein:NolW-like protein 0.73 Psyr_0796 type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A 0.39 16
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_12495 fimbrial protein 0.66 AO353_14320 methyltransferase low > 101
Pseudomonas sp. S08-1 0.73 OH686_10025 Type IV pilus biogenesis protein PilQ 0.76 OH686_16495 Leader peptidase (Prepilin peptidase) / N-methyltransferase low > 80
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_1539 Type IV pilus biogenesis protein PilQ 0.68 Pf1N1B4_2840 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) low > 87
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_09395 fimbrial protein 0.65 AO356_16005 methyltransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_3756 Type IV pilus biogenesis protein PilQ 0.63 Pf6N2E2_5140 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) low > 103
Pseudomonas sp. RS175 0.70 PFR28_05011 Type 3 secretion system secretin 0.62 PFR28_03733 Type 4 prepilin-like proteins leader peptide-processing enzyme low > 88
Pseudomonas fluorescens GW456-L13 0.70 PfGW456L13_277 Type IV pilus biogenesis protein PilQ 0.70 PfGW456L13_1508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) low > 87
Marinobacter adhaerens HP15 0.47 HP15_478 type 4 fimbrial biogenesis protein PilQ 0.49 HP15_2411 type IV pilus prepilin peptidase PilD low > 73
Kangiella aquimarina DSM 16071 0.38 B158DRAFT_0762 type IV pilus secretin (or competence protein) PilQ 0.50 B158DRAFT_2140 type 4 prepilin peptidase 1 (EC:3.4.23.43). Aspartic peptidase. MEROPS family A24A — —
Acinetobacter radioresistens SK82 0.37 MPMX26_02812 Type 3 secretion system secretin 0.46 MPMX26_00244 Type 4 prepilin-like proteins leader peptide-processing enzyme 0.79 16
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF1333 Type IV pilus biogenesis protein PilQ 0.45 GFF1281 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) low > 90
Dechlorosoma suillum PS 0.34 Dsui_1191 type IV pilus secretin PilQ/competence protein 0.51 Dsui_1318 prepilin signal peptidase PulO-like peptidase low > 51
Acidovorax sp. GW101-3H11 0.34 Ac3H11_4703 Type IV pilus biogenesis protein PilQ 0.41 Ac3H11_4764 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) — —
Ralstonia solanacearum IBSBF1503 0.34 RALBFv3_RS06945 type IV pilus secretin PilQ 0.48 RALBFv3_RS06190 prepilin peptidase low > 76
Ralstonia solanacearum UW163 0.34 UW163_RS06670 type IV pilus secretin PilQ 0.48 UW163_RS07435 prepilin peptidase — —
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS19015 secretin 0.42 RR42_RS17990 methyltransferase low > 128
Ralstonia solanacearum GMI1000 0.33 RS_RS14890 type IV pilus secretin PilQ 0.43 RS_RS14140 prepilin peptidase low > 80
Ralstonia solanacearum PSI07 0.33 RPSI07_RS10290 type IV pilus secretin PilQ 0.45 RPSI07_RS11050 prepilin peptidase 0.38 52
Shewanella oneidensis MR-1 0.33 SO0285 type IV pilus biogenesis protein PilQ (NCBI ptt file) 0.49 SO0414 pilD type 4 prepilin-like proteins leader peptide processing enzyme (NCBI ptt file) low > 76
Variovorax sp. OAS795 0.33 ABID97_RS23265 type IV pilus secretin PilQ 0.39 ABID97_RS23440 A24 family peptidase 0.97 16
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS02600 temperature dependent type IV pilus secretin PilQ 0.46 ABZR87_RS01855 A24 family peptidase 0.66 47
Shewanella loihica PV-4 0.33 Shew_0212 type IV pilus secretin PilQ (RefSeq) 0.47 Shew_3440 prepilin peptidase (RefSeq) low > 60
Shewanella sp. ANA-3 0.33 Shewana3_3895 type IV pilus secretin PilQ (RefSeq) 0.49 Shewana3_0417 type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A (RefSeq) low > 73
Variovorax sp. SCN45 0.32 GFF5323 Type IV pilus biogenesis protein PilQ 0.40 GFF2508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.99 17
Shewanella amazonensis SB2B 0.32 Sama_3369 type IV pilus biogenesis protein PilQ (RefSeq) 0.49 Sama_0367 prepilin peptidase (RefSeq) low > 62
Dyella japonica UNC79MFTsu3.2 0.32 ABZR86_RS11790 type IV pilus secretin PilQ 0.44 ABZR86_RS10050 A24 family peptidase 0.57 36
Rhodanobacter denitrificans MT42 0.32 LRK55_RS11580 type IV pilus secretin PilQ 0.41 LRK55_RS03730 A24 family peptidase low > 63
Rhodanobacter sp. FW510-T8 0.32 OKGIIK_12040 pilQ type IV pilus secretin PilQ 0.41 OKGIIK_10830 pulO prepilin peptidase low > 52
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS11855 type IV pilus secretin PilQ 0.41 LRK54_RS03960 A24 family peptidase 0.70 21
Herbaspirillum seropedicae SmR1 0.28 HSERO_RS20915 secretin 0.35 HSERO_RS01760 methyltransferase low > 78
Xanthomonas campestris pv. campestris strain 8004 0.27 Xcc-8004.1189.1 Type IV pilus biogenesis protein PilQ 0.45 Xcc-8004.1345.1 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) — —
Lysobacter sp. OAE881 0.26 ABIE51_RS17165 type IV pilus secretin PilQ family protein 0.48 ABIE51_RS04805 A24 family peptidase low > 62

Not shown: 0 genomes with orthologs for Psest_3715 only; 39 genomes with orthologs for Psest_3286 only