| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas simiae WCS417 | 1.0 | PS417_25395 | | excinuclease ABC subunit A | 1.0 | PS417_15115 | | exonuclease SbcD | 0.50 | 9 |
| Pseudomonas fluorescens SBW25-INTG | 1.00 | PFLU_RS27025 | | excinuclease ABC subunit UvrA | 0.96 | PFLU_RS17135 | | exonuclease subunit SbcD | low | > 109 |
| Pseudomonas fluorescens SBW25 | 1.00 | PFLU_RS27025 | | excinuclease ABC subunit UvrA | 0.96 | PFLU_RS17135 | | exonuclease subunit SbcD | low | > 109 |
| Pseudomonas lactucae CFBP13502 | 0.99 | GEMAOFIL_05194 | | UvrABC system protein A | 0.92 | GEMAOFIL_03324 | | Nuclease SbcCD subunit D | low | > 93 |
| Pseudomonas fluorescens FW300-N1B4 | 0.98 | Pf1N1B4_2611 | | Excinuclease ABC subunit A | 0.86 | Pf1N1B4_4633 | | Exonuclease SbcD | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.98 | PfGW456L13_1283 | | Excinuclease ABC subunit A | 0.86 | PfGW456L13_3307 | | Exonuclease SbcD | 0.31 | 36 |
| Pseudomonas fluorescens FW300-N2E3 | 0.98 | AO353_06855 | | ABC-ATPase UvrA | 0.86 | AO353_23680 | | exonuclease SbcD | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.97 | AO356_14785 | | ABC-ATPase UvrA | 0.86 | AO356_24630 | | exonuclease SbcD | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.97 | Pf6N2E2_4888 | | Excinuclease ABC subunit A | 0.86 | Pf6N2E2_619 | | Exonuclease SbcD | low | > 103 |
| Pseudomonas sp. RS175 | 0.97 | PFR28_03974 | | UvrABC system protein A | 0.86 | PFR28_01589 | | Nuclease SbcCD subunit D | low | > 88 |
| Pseudomonas sp. DMC3 | 0.97 | GFF3792 | | UvrABC system protein A | 0.85 | GFF3025 | | Nuclease SbcCD subunit D | low | > 89 |
| Pseudomonas syringae pv. syringae B728a | 0.95 | Psyr_4520 | | Excinuclease ABC subunit A | 0.83 | Psyr_1715 | | Exodeoxyribonuclease I subunit D | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.95 | Psyr_4520 | | Excinuclease ABC subunit A | 0.83 | Psyr_1715 | | Exodeoxyribonuclease I subunit D | low | > 86 |
| Pseudomonas sp. SVBP6 | 0.95 | COO64_RS16075 | uvrA | excinuclease ABC subunit UvrA | 0.80 | COO64_RS05450 | | exonuclease SbcCD subunit D C-terminal domain-containing protein | low | > 93 |
| Pseudomonas sp. BP01 | 0.93 | JOY50_RS20305 | uvrA | excinuclease ABC subunit UvrA | 0.78 | JOY50_RS16430 | | exonuclease SbcCD subunit D C-terminal domain-containing protein | low | > 84 |
| Pseudomonas putida KT2440 | 0.93 | PP_0483 | | excinuclease (uvrABC system protein A) | 0.77 | PP_2025 | | Exonuclease SbcD | — | — |
| Pseudomonas aeruginosa PA14 | 0.91 | IKLFDK_21795 | | excinuclease ABC subunit UvrA | 0.68 | IKLFDK_02705 | | exonuclease SbcCD subunit D | low | > 100 |
| Pseudomonas stutzeri RCH2 | 0.90 | Psest_3576 | | excinuclease ABC, A subunit | 0.66 | Psest_3539 | | exonuclease SbcD | low | > 67 |
| Escherichia fergusonii Becca | 0.77 | EFB2_04533 | | UvrABC system protein A | 0.21 | EFB2_03659 | | Nuclease SbcCD subunit D | low | > 86 |
| Escherichia coli ECRC101 | 0.77 | MCAODC_03405 | uvrA | excinuclease ABC subunit UvrA | 0.21 | MCAODC_27775 | sbcD | exonuclease subunit SbcD | low | > 88 |
| Escherichia coli ECRC99 | 0.77 | KEDOAH_15255 | uvrA | excinuclease ABC subunit UvrA | 0.21 | KEDOAH_19415 | sbcD | exonuclease subunit SbcD | — | — |
| Escherichia coli ECRC102 | 0.77 | NIAGMN_10740 | uvrA | excinuclease ABC subunit UvrA | 0.21 | NIAGMN_06605 | sbcD | exonuclease subunit SbcD | low | > 80 |
| Escherichia coli ECRC98 | 0.77 | JDDGAC_16530 | uvrA | excinuclease ABC subunit UvrA | 0.21 | JDDGAC_12205 | sbcD | exonuclease subunit SbcD | low | > 87 |
| Escherichia coli ECOR38 | 0.77 | HEPCGN_11510 | uvrA | excinuclease ABC subunit UvrA | 0.21 | HEPCGN_07190 | sbcD | exonuclease subunit SbcD | low | > 88 |
| Escherichia coli Nissle 1917 | 0.77 | ECOLIN_RS23485 | | excinuclease ABC subunit UvrA | 0.21 | ECOLIN_RS02405 | | exonuclease subunit SbcD | low | > 55 |
| Escherichia coli ECRC100 | 0.77 | OKFHMN_12895 | uvrA | excinuclease ABC subunit UvrA | 0.21 | OKFHMN_08550 | sbcD | exonuclease subunit SbcD | 0.57 | 61 |
| Escherichia coli BW25113 | 0.77 | b4058 | uvrA | excinuclease ABC subunit A (NCBI) | 0.21 | b0398 | sbcD | exonuclease, dsDNA, ATP-dependent (NCBI) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.77 | OHPLBJKB_03983 | | UvrABC system protein A | 0.21 | OHPLBJKB_03278 | | Nuclease SbcCD subunit D | low | > 74 |
| Escherichia coli ECRC62 | 0.77 | BNILDI_06380 | uvrA | excinuclease ABC subunit UvrA | 0.21 | BNILDI_22895 | sbcD | exonuclease subunit SbcD | low | > 75 |
| Escherichia coli ECOR27 | 0.77 | NOLOHH_05145 | uvrA | excinuclease ABC subunit UvrA | 0.21 | NOLOHH_01480 | sbcD | exonuclease subunit SbcD | low | > 76 |
| Escherichia coli BL21 | 0.77 | ECD_03930 | | ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC | 0.21 | ECD_00346 | | exonuclease, dsDNA, ATP-dependent | low | > 61 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.77 | GFF1429 | | Excinuclease ABC subunit A | 0.20 | GFF4294 | | Exonuclease SbcD | low | > 78 |
| Dickeya dadantii 3937 | 0.77 | DDA3937_RS17605 | | excinuclease ABC subunit UvrA | 0.21 | DDA3937_RS05420 | | exonuclease subunit SbcD | low | > 74 |
| Klebsiella pneumoniae MKP103 | 0.77 | KDGMDA_10400 | | excinuclease ABC subunit UvrA | 0.20 | KDGMDA_14300 | | exonuclease subunit SbcD | low | > 95 |
| Rahnella sp. WP5 | 0.77 | EX31_RS11990 | | excinuclease ABC subunit UvrA | 0.22 | EX31_RS22035 | | exonuclease subunit SbcD | low | > 89 |
| Dickeya dianthicola 67-19 | 0.77 | HGI48_RS17610 | | excinuclease ABC subunit UvrA | 0.21 | HGI48_RS05480 | | exonuclease subunit SbcD | low | > 71 |
| Dickeya dianthicola ME23 | 0.77 | DZA65_RS18735 | | excinuclease ABC subunit UvrA | 0.21 | DZA65_RS05805 | | exonuclease subunit SbcD | low | > 75 |
| Klebsiella michiganensis M5al | 0.76 | BWI76_RS01950 | | excinuclease ABC subunit A | 0.21 | BWI76_RS06225 | | exonuclease sbcCD subunit D | low | > 92 |
| Pectobacterium carotovorum WPP14 | 0.76 | HER17_RS03550 | | excinuclease ABC subunit UvrA | 0.21 | HER17_RS16045 | | exonuclease subunit SbcD | low | > 75 |
| Enterobacter asburiae PDN3 | 0.76 | EX28DRAFT_4246 | | excinuclease ABC, A subunit | 0.19 | EX28DRAFT_2576 | | Exodeoxyribonuclease I subunit D (EC 3.1.11.1) | low | > 76 |
| Pantoea agglomerans CFBP13505 P0401 | 0.76 | PagCFBP13505_RS21140 | | excinuclease ABC subunit UvrA | 0.22 | PagCFBP13505_RS10290 | | exonuclease subunit SbcD | low | > 74 |
| Alteromonas macleodii MIT1002 | 0.76 | MIT1002_00179 | | Excinuclease ABC subunit A | 0.23 | MIT1002_00897 | | Nuclease SbcCD subunit D | low | > 70 |
| Serratia liquefaciens MT49 | 0.76 | IAI46_22905 | | excinuclease ABC subunit UvrA | 0.20 | IAI46_04770 | | exonuclease subunit SbcD | low | > 86 |
| Vibrio cholerae E7946 ATCC 55056 | 0.76 | CSW01_02080 | | UvrABC system protein A | 0.14 | CSW01_16840 | | exonuclease sbcCD subunit D | low | > 62 |
| Pantoea sp. MT58 | 0.76 | IAI47_17815 | | excinuclease ABC subunit UvrA | 0.22 | IAI47_14860 | | exonuclease subunit SbcD | low | > 76 |
| Shewanella oneidensis MR-1 | 0.75 | SO4030 | uvrA | excinuclease ABC, A subunit (NCBI ptt file) | 0.15 | SO2844 | | exonuclease SbcD, putative (NCBI ptt file) | low | > 76 |
| Erwinia amylovora T8 | 0.75 | OLJFJH_03425 | | excinuclease ABC subunit UvrA | 0.20 | OLJFJH_18190 | | exonuclease subunit SbcD | low | > 58 |
| Shewanella sp. ANA-3 | 0.75 | Shewana3_3592 | | excinuclease ABC subunit A (RefSeq) | 0.16 | Shewana3_2612 | | exodeoxyribonuclease I subunit D (RefSeq) | low | > 73 |
| Erwinia tracheiphila SCR3 | 0.75 | LU632_RS23685 | uvrA | excinuclease ABC subunit UvrA | 0.22 | LU632_RS18930 | sbcD | exonuclease subunit SbcD | low | > 74 |
| Erwinia tracheiphila HP pepo 2.2 | 0.75 | IJEDHG_11155 | uvrA | excinuclease ABC subunit UvrA | 0.22 | IJEDHG_26120 | sbcD | exonuclease subunit SbcD | low | > 61 |
| Shewanella loihica PV-4 | 0.75 | Shew_0533 | | excinuclease ABC, A subunit (RefSeq) | 0.14 | Shew_2457 | | nuclease SbcCD, D subunit (RefSeq) | 0.47 | 34 |
| Acinetobacter baumannii LAC-4 | 0.69 | RR41_RS01040 | | excinuclease ABC subunit UvrA | 0.41 | RR41_RS14785 | | exonuclease SbcCD subunit D | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.69 | RR42_RS02145 | | excinuclease ABC subunit A | 0.17 | RR42_RS35935 | | exonuclease SbcD | low | > 128 |
| Acinetobacter radioresistens SK82 | 0.69 | MPMX26_02892 | | UvrABC system protein A | 0.41 | MPMX26_02402 | | Nuclease SbcCD subunit D | low | > 36 |
| Azospirillum sp. SherDot2 | 0.61 | MPMX19_01152 | | UvrABC system protein A | 0.38 | MPMX19_04315 | | Nuclease SbcCD subunit D | low | > 112 |
| Azospirillum brasilense Sp245 | 0.60 | AZOBR_RS15370 | | excinuclease ABC subunit A | 0.34 | AZOBR_RS18495 | | metallophosphatase | 0.40 | 95 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.51 | Echvi_1138 | | excinuclease ABC, A subunit | 0.13 | Echvi_1707 | | exonuclease SbcD | low | > 79 |
| Bacteroides ovatus ATCC 8483 | 0.51 | BACOVA_03703 | | excinuclease ABC, A subunit | 0.35 | BACOVA_00394 | | exonuclease SbcCD, D subunit | low | > 96 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.51 | BT0578 | | excinuclease ABC subunit A (NCBI ptt file) | 0.35 | BT0244 | | putative exonuclease (NCBI ptt file) | low | > 81 |
| Phocaeicola dorei CL03T12C01 | 0.50 | ABI39_RS15330 | | excinuclease ABC subunit UvrA | 0.33 | ABI39_RS02545 | | exonuclease SbcCD subunit D | low | > 72 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.50 | CA264_18100 | | ABC-ATPase UvrA | 0.21 | CA264_11095 | | exonuclease sbcCD subunit D | low | > 74 |
| Phocaeicola vulgatus CL09T03C04 | 0.50 | HMPREF1058_RS01735 | | excinuclease ABC subunit UvrA | 0.32 | HMPREF1058_RS08350 | | exonuclease SbcCD subunit D C-terminal domain-containing protein | low | > 67 |
| Parabacteroides merdae CL09T00C40 | 0.50 | HMPREF1078_RS00835 | | excinuclease ABC subunit UvrA | 0.38 | HMPREF1078_RS09930 | | exonuclease SbcCD subunit D | low | > 61 |
Not shown: 56 genomes with orthologs for PS417_25395 only; 0 genomes with orthologs for PS417_15115 only